RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 SMARCAL1Q9NZC9 954 aa15.3■□□□□ 0.04
CDK3-201ENST00000425876 KLK14Q9P0G3 267 aa15.3■□□□□ 0.04
CDK3-201ENST00000425876 STRIP2Q9ULQ0 834 aa15.3■□□□□ 0.04
CDK3-201ENST00000425876 PADI3Q9ULW8 664 aa15.3■□□□□ 0.04
CDK3-201ENST00000425876 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.3■□□□□ 0.04
CDK3-201ENST00000425876 GIT1Q9Y2X7 761 aa15.3■□□□□ 0.04
CDK3-201ENST00000425876 PCDHA3Q9Y5H8 950 aa15.3■□□□□ 0.04
CDK3-201ENST00000425876 SNX9Q9Y5X1 595 aa15.3■□□□□ 0.04
CDK3-201ENST00000425876 TCRBV5S1A1TA0A578 114 aa15.29■□□□□ 0.04
CDK3-201ENST00000425876 CCDC188H7C350 402 aa15.29■□□□□ 0.04
CDK3-201ENST00000425876 O00370 1275 aa15.29■□□□□ 0.04
CDK3-201ENST00000425876 PTGESO14684 152 aa15.29■□□□□ 0.04
CDK3-201ENST00000425876 SPOPO43791 374 aa15.29■□□□□ 0.04
CDK3-201ENST00000425876 PROSCO94903 275 aa15.29■□□□□ 0.04
CDK3-201ENST00000425876 MAN1A1P33908 653 aa15.29■□□□□ 0.04
CDK3-201ENST00000425876 PAK2Q13177 524 aa15.29■□□□□ 0.04
CDK3-201ENST00000425876 DSC3Q14574 896 aa15.29■□□□□ 0.04
CDK3-201ENST00000425876 PTPROQ16827 1216 aa15.29■□□□□ 0.04
CDK3-201ENST00000425876 SV2CQ496J9 727 aa15.29■□□□□ 0.04
CDK3-201ENST00000425876 SGO2Q562F6 1265 aa15.29■□□□□ 0.04
CDK3-201ENST00000425876 DENND1BQ6P3S1 775 aa15.29■□□□□ 0.04
CDK3-201ENST00000425876 FEZF2Q8TBJ5 459 aa15.29■□□□□ 0.04
CDK3-201ENST00000425876 PNKPQ96T60 521 aa15.29■□□□□ 0.04
CDK3-201ENST00000425876 RBM12Q9NTZ6 932 aaKnown RBP15.29■□□□□ 0.04
CDK3-201ENST00000425876 HMGXB4Q9UGU5 601 aa15.29■□□□□ 0.04
CDK3-201ENST00000425876 BRCA2P51587 3418 aa15.29■□□□□ 0.04
CDK3-201ENST00000425876 SCN1AP35498 2009 aa15.29■□□□□ 0.04
CDK3-201ENST00000425876 TMEM110-MUSTN1A8MSY1 372 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 KPNA7A9QM74 516 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 SSTR3P32745 418 aaPredicted RBP15.28■□□□□ 0.04
CDK3-201ENST00000425876 TAF6P49848 677 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 LPIN1Q14693 890 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 DCAF12L1Q5VU92 463 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 LCLAT1Q6UWP7 414 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 DPH6Q7L8W6 267 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 C3orf20Q8ND61 904 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 ALG3Q92685 438 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 BTBD6Q96KE9 485 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 HEXIM2Q96MH2 286 aaKnown RBP15.28■□□□□ 0.04
CDK3-201ENST00000425876 DNAI2Q9GZS0 605 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 TRMT13Q9NUP7 481 aaKnown RBP15.28■□□□□ 0.04
CDK3-201ENST00000425876 WDR35Q9P2L0 1181 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 PHF24Q9UPV7 400 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 A0A0U1RQG5 324 aaPredicted RBP15.28■□□□□ 0.04
CDK3-201ENST00000425876 A0A1W2PQ45 241 aaPredicted RBP15.28■□□□□ 0.04
CDK3-201ENST00000425876 A0A1W2PQY0 241 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 TMEM191CA6NGB0 347 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 ERLIN1O75477 346 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 MICAL2O94851 1124 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 SKIP12755 728 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 CD52P31358 61 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 SOX4Q06945 474 aaPredicted RBP15.28■□□□□ 0.04
CDK3-201ENST00000425876 PPP2R5EQ16537 467 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 SOWAHAQ2M3V2 549 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 PPP1R15BQ5SWA1 713 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 TMCO3Q6UWJ1 677 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.28■□□□□ 0.04
CDK3-201ENST00000425876 KRT35Q92764 455 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 RNPC3Q96LT9 517 aaKnown RBP15.28■□□□□ 0.04
CDK3-201ENST00000425876 MRPL45Q9BRJ2 306 aaKnown RBP15.28■□□□□ 0.04
CDK3-201ENST00000425876 IP6K2Q9UHH9 426 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 PTPN22Q9Y2R2 807 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 PTCH2Q9Y6C5 1203 aa15.28■□□□□ 0.04
CDK3-201ENST00000425876 A0A0U1RQF3 1178 aa15.27■□□□□ 0.03
CDK3-201ENST00000425876 ATP8B1O43520 1251 aa15.27■□□□□ 0.03
CDK3-201ENST00000425876 GHRP10912 638 aa15.27■□□□□ 0.03
CDK3-201ENST00000425876 GPD2P43304 727 aa15.27■□□□□ 0.03
CDK3-201ENST00000425876 GABRB2P47870 512 aa15.27■□□□□ 0.03
CDK3-201ENST00000425876 RWDD2BP57060 319 aa15.27■□□□□ 0.03
CDK3-201ENST00000425876 VSNL1P62760 191 aa15.27■□□□□ 0.03
CDK3-201ENST00000425876 ZNF268Q14587 947 aaPredicted RBP15.27■□□□□ 0.03
CDK3-201ENST00000425876 PKN2Q16513 984 aaKnown RBP15.27■□□□□ 0.03
CDK3-201ENST00000425876 PTPN20Q4JDL3 420 aa15.27■□□□□ 0.03
CDK3-201ENST00000425876 C2CD6Q53TS8 623 aa15.27■□□□□ 0.03
CDK3-201ENST00000425876 CC2D1AQ6P1N0 951 aaPredicted RBP15.27■□□□□ 0.03
CDK3-201ENST00000425876 DNAJC24Q6P3W2 148 aa15.27■□□□□ 0.03
CDK3-201ENST00000425876 FBXO46Q6PJ61 603 aaPredicted RBP15.27■□□□□ 0.03
CDK3-201ENST00000425876 TOP6BLQ8N6T0 577 aa15.27■□□□□ 0.03
CDK3-201ENST00000425876 GSTCDQ8NEC7 633 aa15.27■□□□□ 0.03
CDK3-201ENST00000425876 LRRC1Q9BTT6 524 aa15.27■□□□□ 0.03
CDK3-201ENST00000425876 PLVAPQ9BX97 442 aa15.27■□□□□ 0.03
CDK3-201ENST00000425876 MIS12Q9H081 205 aa15.27■□□□□ 0.03
CDK3-201ENST00000425876 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.27■□□□□ 0.034e-9■□□□□ 8.6
CDK3-201ENST00000425876 ARFGAP3Q9NP61 516 aa15.27■□□□□ 0.03
CDK3-201ENST00000425876 UBN1Q9NPG3 1134 aa15.27■□□□□ 0.03
CDK3-201ENST00000425876 STARD7Q9NQZ5 370 aa15.27■□□□□ 0.03
CDK3-201ENST00000425876 ARVCFO00192 962 aa15.26■□□□□ 0.03
CDK3-201ENST00000425876 KRIT1O00522 736 aa15.26■□□□□ 0.03
CDK3-201ENST00000425876 SPTLC1O15269 473 aa15.26■□□□□ 0.03
CDK3-201ENST00000425876 ZRANB2O95218 330 aaKnown RBP eCLIP15.26■□□□□ 0.03
CDK3-201ENST00000425876 THP07101 528 aa15.26■□□□□ 0.03
CDK3-201ENST00000425876 SETSIPP0DME0 302 aa15.26■□□□□ 0.03
CDK3-201ENST00000425876 CKBP12277 381 aa15.26■□□□□ 0.03
CDK3-201ENST00000425876 LILRA4P59901 499 aa15.26■□□□□ 0.03
CDK3-201ENST00000425876 ZNF618Q5T7W0 954 aa15.26■□□□□ 0.03
CDK3-201ENST00000425876 ARHGAP17Q68EM7 881 aa15.26■□□□□ 0.03
CDK3-201ENST00000425876 C8orf74Q6P047 294 aa15.26■□□□□ 0.03
CDK3-201ENST00000425876 LLGL2Q6P1M3 1020 aa15.26■□□□□ 0.03
CDK3-201ENST00000425876 AGMOQ6ZNB7 445 aa15.26■□□□□ 0.03
CDK3-201ENST00000425876 FAM43BQ6ZT52 329 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms