RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 FAM213AQ9BRX8 229 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 FGFBP2Q9BYJ0 223 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 ASB7Q9H672 318 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 CYP4F11Q9HBI6 524 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 FBXL5Q9UKA1 691 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 DERAQ9Y315 318 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 C2CD2Q9Y426 696 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 TIMM13Q9Y5L4 95 aaPredicted RBP13.75□□□□□ -0.21
SGCE-203ENST00000425444 SHISA7A6NL88 538 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 SRRM3A6NNA2 597 aaPredicted RBP13.74□□□□□ -0.21
SGCE-203ENST00000425444 MAN2B1O00754 1011 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 PPEF2O14830 753 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 IL18RAPO95256 599 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 LDHAP00338 332 aaKnown RBP13.74□□□□□ -0.21
SGCE-203ENST00000425444 ODC1P11926 461 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 GARTP22102 1010 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 ADSSP30520 456 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 CNR2P34972 360 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 CXCL12P48061 93 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 KRT85P78386 507 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 CCDC6Q16204 474 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 UVSSAQ2YD98 709 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 PSAPL1Q6NUJ1 521 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 CEP57L1Q8IYX8 460 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 FAM160A2Q8N612 972 aaPredicted RBP13.74□□□□□ -0.21
SGCE-203ENST00000425444 ING5Q8WYH8 240 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 HPS3Q969F9 1004 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 SPATA32Q96LK8 384 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 IER2Q9BTL4 223 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 LMAN1LQ9HAT1 526 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 RXFP3Q9NSD7 469 aa13.74□□□□□ -0.21
SGCE-203ENST00000425444 RBAKQ9NYW8 714 aaPredicted RBP13.74□□□□□ -0.21
SGCE-203ENST00000425444 ARHGEF37A1IGU5 675 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 GOLGA8IPA6NC78 632 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 GOLGA8JA6NMD2 632 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 M0QZQ0 153 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 AXIN1O15169 862 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 AFMP43652 599 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 POU5F1Q01860 360 aaKnown RBP13.73□□□□□ -0.21
SGCE-203ENST00000425444 MRPL58Q14197 206 aaKnown RBP13.73□□□□□ -0.21
SGCE-203ENST00000425444 PABPC1LQ4VXU2 614 aaKnown RBP13.73□□□□□ -0.21
SGCE-203ENST00000425444 FAM26FQ5R3K3 315 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 C9orf57Q5W0N0 161 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 HEATR6Q6AI08 1181 aaKnown RBP13.73□□□□□ -0.21
SGCE-203ENST00000425444 CRELD2Q6UXH1 353 aaPredicted RBP13.73□□□□□ -0.21
SGCE-203ENST00000425444 RTL10Q7L3V2 364 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 BRSK2Q8IWQ3 736 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 NPAS3Q8IXF0 933 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 EFCAB13Q8IY85 973 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 ZNF687Q8N1G0 1237 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 ZNF461Q8TAF7 563 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 CBWD1Q9BRT8 395 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 LSM14BQ9BX40 385 aaKnown RBP13.73□□□□□ -0.21
SGCE-203ENST00000425444 PLA2G2FQ9BZM2 168 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 BLZF1Q9H2G9 400 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 ARRDC1-AS1Q9H2J1 176 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 PCIF1Q9H4Z3 704 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 RCOR1Q9UKL0 485 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 KCNH3Q9ULD8 1083 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 ATP6V1DQ9Y5K8 247 aa13.73□□□□□ -0.21
SGCE-203ENST00000425444 TMEM8BA6NDV4 472 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 EIF3DO15371 548 aaKnown RBP eCLIP13.72□□□□□ -0.21
SGCE-203ENST00000425444 ECI2O75521 394 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 ABLIM3O94929 683 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 POU2F2P09086 479 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 ATF2P15336 505 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 SPINK2P20155 84 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 CASP1P29466 404 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 AARSP49588 968 aaKnown RBP eCLIP13.72□□□□□ -0.21
SGCE-203ENST00000425444 TAF6P49848 677 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 LILRA4P59901 499 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 TFAMQ00059 246 aaKnown RBP13.72□□□□□ -0.21
SGCE-203ENST00000425444 FOXC1Q12948 553 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 BECN1Q14457 450 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 TPGS2Q68CL5 300 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 OVOS1Q6IE37 1185 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 UNC13DQ70J99 1090 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 LONP2Q86WA8 852 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 NT5DC4Q86YG4 428 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 ELMOD1Q8N336 334 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 GLIS3Q8NEA6 775 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 SENP8Q96LD8 212 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 ZNF560Q96MR9 790 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 C7orf25Q9BPX7 421 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 OXCT2Q9BYC2 517 aaPredicted RBP13.72□□□□□ -0.21
SGCE-203ENST00000425444 BRD9Q9H8M2 597 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 HCFC1R1Q9NWW0 138 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 DPP3Q9NY33 737 aa13.72□□□□□ -0.21
SGCE-203ENST00000425444 AFF4Q9UHB7 1163 aaKnown RBP13.72□□□□□ -0.21
SGCE-203ENST00000425444 NOTCH4Q99466 2003 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 CELSR3Q9NYQ7 3312 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 UBE4BO95155 1302 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 OR6C75A6NL08 312 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 PIRO00625 290 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 EXTL3O43909 919 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 ZNF806P0C7X5 589 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 TYMPP19971 482 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 PAX3P23760 479 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 SV2CQ496J9 727 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 TANGO2Q6ICL3 276 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms