RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 AFG3L2Q9Y4W6 797 aa13.72□□□□□ -0.21
COL12A1-205ENST00000425443 CSADQ9Y600 493 aa13.72□□□□□ -0.21
COL12A1-205ENST00000425443 CENPFP49454 3210 aa13.72□□□□□ -0.21
COL12A1-205ENST00000425443 PTPRJQ12913 1337 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 GSTA1P08263 222 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 UBA1P22314 1058 aaKnown RBP13.71□□□□□ -0.21
COL12A1-205ENST00000425443 FOXN2P32314 431 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 CETN2P41208 172 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 SCNN1BP51168 640 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 TAOK1Q7L7X3 1001 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 SPOCK2Q92563 424 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 SLCO2A1Q92959 643 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 ZCWPW1Q9H0M4 648 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.71□□□□□ -0.21
COL12A1-205ENST00000425443 UMODL1Q5DID0 1318 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 A0A1B0GUA9 196 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 NOP56O00567 594 aaKnown RBP13.71□□□□□ -0.21
COL12A1-205ENST00000425443 ZSCAN5DPP0CG00 497 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 BRAFP15056 766 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 TCF4P15884 667 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 TBXAS1P24557 533 aaPredicted RBP13.71□□□□□ -0.21
COL12A1-205ENST00000425443 TAS2R40P59535 323 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 PTK6Q13882 451 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 TREML2Q5T2D2 321 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 FAM47EQ6ZV65 393 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 OR5B17Q8NGF7 314 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 CKAP2Q8WWK9 683 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 SNF8Q96H20 258 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 ROPN1BQ9BZX4 212 aaPredicted RBP13.71□□□□□ -0.21
COL12A1-205ENST00000425443 ROPN1Q9HAT0 212 aaPredicted RBP13.71□□□□□ -0.21
COL12A1-205ENST00000425443 PRKAG3Q9UGI9 489 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 DOCK1Q14185 1865 aa13.71□□□□□ -0.21
COL12A1-205ENST00000425443 MYPNQ86TC9 1320 aa13.71□□□□□ -0.22
COL12A1-205ENST00000425443 TLR3O15455 904 aaKnown RBP13.7□□□□□ -0.22
COL12A1-205ENST00000425443 VNN1O95497 513 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 IFNB1P01574 187 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 NQO1P15559 274 aaKnown RBP13.7□□□□□ -0.22
COL12A1-205ENST00000425443 TCF7P36402 384 aaPredicted RBP13.7□□□□□ -0.22
COL12A1-205ENST00000425443 PLCB3Q01970 1234 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 TRPC3Q13507 836 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 DBN1Q16643 649 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 C15orf39Q6ZRI6 1047 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 GRK7Q8WTQ7 553 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 PRPF31Q8WWY3 499 aaKnown RBP13.7□□□□□ -0.22
COL12A1-205ENST00000425443 SERPINB12Q96P63 405 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 PHACTR1Q9C0D0 580 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 AVENQ9NQS1 362 aaPredicted RBP13.7□□□□□ -0.22
COL12A1-205ENST00000425443 NAALADL1Q9UQQ1 740 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 GOLGA8SH3BPF8 625 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 GOLGA8MH3BSY2 632 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 RFC5P40937 340 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 CRELD2Q6UXH1 353 aaPredicted RBP13.7□□□□□ -0.22
COL12A1-205ENST00000425443 DLK2Q6UY11 383 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 TRIM72Q6ZMU5 477 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 ABRAQ8N0Z2 381 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 PLEKHG4BQ96PX9 1271 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 CGRRF1Q99675 332 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 HAPLN2Q9GZV7 340 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 C10orf88Q9H8K7 445 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 APOBEC3GQ9HC16 384 aaKnown RBP13.7□□□□□ -0.22
COL12A1-205ENST00000425443 GPRC5DQ9NZD1 345 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 A0A0B4J269 797 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 SPAG7O75391 227 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 ETS1P14921 441 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 GCAP28676 217 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 ARL2P36404 184 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 CENPCQ03188 943 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 TMEM62Q0P6H9 643 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 BNIP1Q12981 228 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 KLF1Q13351 362 aaPredicted RBP13.7□□□□□ -0.22
COL12A1-205ENST00000425443 LAMB3Q13751 1172 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 VGLL4Q14135 290 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 SAPCD2Q86UD0 394 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 RHOT1Q8IXI2 618 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 B4GALNT2Q8NHY0 566 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 SEPT1Q8WYJ6 367 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 EZH1Q92800 747 aaPredicted RBP13.7□□□□□ -0.22
COL12A1-205ENST00000425443 TGS1Q96RS0 853 aaKnown RBP13.7□□□□□ -0.22
COL12A1-205ENST00000425443 STMN4Q9H169 189 aaPredicted RBP13.7□□□□□ -0.22
COL12A1-205ENST00000425443 HOMER3Q9NSC5 361 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 NUB1Q9Y5A7 615 aa13.7□□□□□ -0.22
COL12A1-205ENST00000425443 POC1B-GALNT4F8VUJ3 575 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 PROSCO94903 275 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 ITIH2P19823 946 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 MAN1A1P33908 653 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 OSTNP61366 133 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 DYNLT1P63172 113 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 CAPSQ13938 189 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 ZNF268Q14587 947 aaPredicted RBP13.69□□□□□ -0.22
COL12A1-205ENST00000425443 TMED2Q15363 201 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 LY6KQ17RY6 165 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 DCUN1D2Q6PH85 259 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 SCARA5Q6ZMJ2 495 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 CROCCP2Q86T23 111 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 GRID1Q9ULK0 1009 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 STK38LQ9Y2H1 464 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 SCINQ9Y6U3 715 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 ADCY3O60266 1144 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 ICAM3P32942 547 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 RPL7AP62424 266 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms