RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 APEX2Q9UBZ4 518 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 PUF60Q9UHX1 559 aaKnown RBP16.7■□□□□ 0.26
SHOX2-202ENST00000425436 SIX4Q9UIU6 781 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 NUB1Q9Y5A7 615 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 PCDHGC5Q9Y5F6 944 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 FHOD1Q9Y613 1164 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 SPTLC1O15269 473 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 FANCGO15287 622 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 C4BPAP04003 597 aaKnown RBP16.7■□□□□ 0.26
SHOX2-202ENST00000425436 IRS1P35568 1242 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 BIRC3Q13489 604 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 ADGRE1Q14246 886 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 TIGD5Q53EQ6 642 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 TDRD10Q5VZ19 366 aaKnown RBP16.7■□□□□ 0.26
SHOX2-202ENST00000425436 MICAL1Q8TDZ2 1067 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 AUTS2Q8WXX7 1259 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 MYLIPQ8WY64 445 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 ELMO3Q96BJ8 720 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 CDX2Q99626 313 aaPredicted RBP16.7■□□□□ 0.26
SHOX2-202ENST00000425436 ITGA11Q9UKX5 1188 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 A0A0U1RQJ8 604 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 CARNS1A5YM72 827 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 BTNL10A8MVZ5 291 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 TMEM189-UBE2V1I3L0A0 370 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 ZNF263O14978 683 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 PHACTR2O75167 634 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 EFEMP2O95967 443 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 IGFBP4P22692 258 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 SOX5P35711 763 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 LILRA4P59901 499 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 RBP5P82980 135 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 CBWD6Q4V339 395 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 CBWD3Q5JTY5 395 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 CBWD5Q5RIA9 395 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 FAM171A1Q5VUB5 890 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 IQCEQ6IPM2 695 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 SV2AQ7L0J3 742 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 TMC7Q7Z402 723 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 CEP57Q86XR8 500 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 ATRIPQ8WXE1 791 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 GUCD1Q96NT3 240 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.69■□□□□ 0.26
SHOX2-202ENST00000425436 LACRTQ9GZZ8 138 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 DNAJC12Q9UKB3 198 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 JRKLQ9Y4A0 524 aa16.69■□□□□ 0.26
SHOX2-202ENST00000425436 EYSQ5T1H1 3165 aa16.68■□□□□ 0.26
SHOX2-202ENST00000425436 C2CD2LO14523 706 aa16.68■□□□□ 0.26
SHOX2-202ENST00000425436 CA8P35219 290 aa16.68■□□□□ 0.26
SHOX2-202ENST00000425436 GFPT1Q06210 699 aaPredicted RBP16.68■□□□□ 0.26
SHOX2-202ENST00000425436 BMS1Q14692 1282 aaKnown RBP16.68■□□□□ 0.26
SHOX2-202ENST00000425436 IFI16Q16666 785 aaKnown RBP16.68■□□□□ 0.26
SHOX2-202ENST00000425436 PAPD7Q5XG87 772 aaKnown RBP16.68■□□□□ 0.26
SHOX2-202ENST00000425436 KRT39Q6A163 491 aa16.68■□□□□ 0.26
SHOX2-202ENST00000425436 NOX5Q96PH1 765 aa16.68■□□□□ 0.26
SHOX2-202ENST00000425436 TCF25Q9BQ70 676 aa16.68■□□□□ 0.26
SHOX2-202ENST00000425436 CARD6Q9BX69 1037 aa16.68■□□□□ 0.26
SHOX2-202ENST00000425436 TMEM8AQ9HCN3 771 aa16.68■□□□□ 0.26
SHOX2-202ENST00000425436 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.68■□□□□ 0.26
SHOX2-202ENST00000425436 ENTPD7Q9NQZ7 604 aa16.68■□□□□ 0.26
SHOX2-202ENST00000425436 TLR9Q9NR96 1032 aa16.68■□□□□ 0.26
SHOX2-202ENST00000425436 MTMR10Q9NXD2 777 aa16.68■□□□□ 0.26
SHOX2-202ENST00000425436 INTUQ9ULD6 942 aa16.68■□□□□ 0.26
SHOX2-202ENST00000425436 LZTS1Q9Y250 596 aa16.68■□□□□ 0.26
SHOX2-202ENST00000425436 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.68■□□□□ 0.26
SHOX2-202ENST00000425436 SF3B1O75533 1304 aaKnown RBP eCLIP16.68■□□□□ 0.26
SHOX2-202ENST00000425436 VWA8A3KMH1 1905 aa16.67■□□□□ 0.26
SHOX2-202ENST00000425436 ATG2AQ2TAZ0 1938 aa16.67■□□□□ 0.26
SHOX2-202ENST00000425436 VNN1O95497 513 aa16.67■□□□□ 0.26
SHOX2-202ENST00000425436 CXCL14O95715 111 aa16.67■□□□□ 0.26
SHOX2-202ENST00000425436 ABL1P00519 1130 aa16.67■□□□□ 0.26
SHOX2-202ENST00000425436 SOD2P04179 222 aa16.67■□□□□ 0.26
SHOX2-202ENST00000425436 PRLRP16471 622 aa16.67■□□□□ 0.26
SHOX2-202ENST00000425436 MXI1P50539 228 aa16.67■□□□□ 0.26
SHOX2-202ENST00000425436 AP3M2P53677 418 aa16.67■□□□□ 0.26
SHOX2-202ENST00000425436 MYL6P60660 151 aa16.67■□□□□ 0.26
SHOX2-202ENST00000425436 UBE3AQ05086 875 aa16.67■□□□□ 0.26
SHOX2-202ENST00000425436 TRPC3Q13507 836 aa16.67■□□□□ 0.26
SHOX2-202ENST00000425436 ZACNQ401N2 412 aa16.67■□□□□ 0.26
SHOX2-202ENST00000425436 PLPP4Q5VZY2 271 aa16.67■□□□□ 0.26
SHOX2-202ENST00000425436 DSTYKQ6XUX3 929 aa16.67■□□□□ 0.26
SHOX2-202ENST00000425436 C15orf39Q6ZRI6 1047 aa16.67■□□□□ 0.26
SHOX2-202ENST00000425436 RNF168Q8IYW5 571 aaPredicted RBP16.67■□□□□ 0.26
SHOX2-202ENST00000425436 HPDLQ96IR7 371 aa16.67■□□□□ 0.26
SHOX2-202ENST00000425436 ADAMTS1Q9UHI8 967 aa16.67■□□□□ 0.26
SHOX2-202ENST00000425436 COQ4Q9Y3A0 265 aa16.67■□□□□ 0.26
SHOX2-202ENST00000425436 TIMM13Q9Y5L4 95 aaPredicted RBP16.67■□□□□ 0.26
SHOX2-202ENST00000425436 RCCD1A6NED2 376 aa16.66■□□□□ 0.26
SHOX2-202ENST00000425436 F8VZ95 297 aa16.66■□□□□ 0.26
SHOX2-202ENST00000425436 TRAPPC3O43617 180 aa16.66■□□□□ 0.26
SHOX2-202ENST00000425436 LRRN2O75325 713 aa16.66■□□□□ 0.26
SHOX2-202ENST00000425436 TADA3O75528 432 aa16.66■□□□□ 0.26
SHOX2-202ENST00000425436 TKTP29401 623 aaKnown RBP16.66■□□□□ 0.26
SHOX2-202ENST00000425436 TAF6P49848 677 aa16.66■□□□□ 0.26
SHOX2-202ENST00000425436 ARID5AQ03989 594 aa16.66■□□□□ 0.26
SHOX2-202ENST00000425436 PTK2Q05397 1052 aa16.66■□□□□ 0.26
SHOX2-202ENST00000425436 DRAP1Q14919 205 aaPredicted RBP16.66■□□□□ 0.26
SHOX2-202ENST00000425436 USP41Q3LFD5 358 aa16.66■□□□□ 0.26
SHOX2-202ENST00000425436 RTP2Q5QGT7 225 aa16.66■□□□□ 0.26
SHOX2-202ENST00000425436 KIAA1841Q6NSI8 718 aa16.66■□□□□ 0.26
SHOX2-202ENST00000425436 PDCL2Q8N4E4 241 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms