RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 SPTBN2O15020 2390 aa14.02□□□□□ -0.17
VRK3-203ENST00000424804 OBSL1O75147 1896 aa14.01□□□□□ -0.17
VRK3-203ENST00000424804 MED19A0JLT2 244 aaPredicted RBP14.01□□□□□ -0.17
VRK3-203ENST00000424804 ZNF263O14978 683 aa14.01□□□□□ -0.17
VRK3-203ENST00000424804 CHADO15335 359 aa14.01□□□□□ -0.17
VRK3-203ENST00000424804 GCNT3O95395 438 aa14.01□□□□□ -0.17
VRK3-203ENST00000424804 PAX3P23760 479 aa14.01□□□□□ -0.17
VRK3-203ENST00000424804 CCNE1P24864 410 aa14.01□□□□□ -0.17
VRK3-203ENST00000424804 SOX9P48436 509 aa14.01□□□□□ -0.17
VRK3-203ENST00000424804 EPHB3P54753 998 aa14.01□□□□□ -0.17
VRK3-203ENST00000424804 ASIC1P78348 528 aa14.01□□□□□ -0.17
VRK3-203ENST00000424804 ADALQ6DHV7 355 aa14.01□□□□□ -0.17
VRK3-203ENST00000424804 USP37Q86T82 979 aa14.01□□□□□ -0.17
VRK3-203ENST00000424804 IQUBQ8NA54 791 aa14.01□□□□□ -0.17
VRK3-203ENST00000424804 LEO1Q8WVC0 666 aaPredicted RBP14.01□□□□□ -0.17
VRK3-203ENST00000424804 FGFBP2Q9BYJ0 223 aa14.01□□□□□ -0.17
VRK3-203ENST00000424804 PANK4Q9NVE7 773 aa14.01□□□□□ -0.17
VRK3-203ENST00000424804 TMLHEQ9NVH6 421 aa14.01□□□□□ -0.17
VRK3-203ENST00000424804 DPP3Q9NY33 737 aa14.01□□□□□ -0.17
VRK3-203ENST00000424804 RCOR1Q9UKL0 485 aa14.01□□□□□ -0.17
VRK3-203ENST00000424804 AGO2Q9UKV8 859 aaKnown RBP14.01□□□□□ -0.17
VRK3-203ENST00000424804 MYBPHLA2RUH7 354 aa14□□□□□ -0.17
VRK3-203ENST00000424804 CYB561D2O14569 222 aa14□□□□□ -0.17
VRK3-203ENST00000424804 PRAMEF12O95522 483 aa14□□□□□ -0.17
VRK3-203ENST00000424804 ODC1P11926 461 aa14□□□□□ -0.17
VRK3-203ENST00000424804 HMGA1P17096 107 aaKnown RBP14□□□□□ -0.17
VRK3-203ENST00000424804 GAP43P17677 238 aa14□□□□□ -0.17
VRK3-203ENST00000424804 GABRR2P28476 465 aa14□□□□□ -0.17
VRK3-203ENST00000424804 AFMP43652 599 aa14□□□□□ -0.17
VRK3-203ENST00000424804 ALDH1A3P47895 512 aa14□□□□□ -0.17
VRK3-203ENST00000424804 CASP5P51878 434 aa14□□□□□ -0.17
VRK3-203ENST00000424804 DMWDQ09019 674 aa14□□□□□ -0.17
VRK3-203ENST00000424804 PLD1Q13393 1074 aa14□□□□□ -0.17
VRK3-203ENST00000424804 E2F4Q16254 413 aa14□□□□□ -0.17
VRK3-203ENST00000424804 SLC39A12Q504Y0 691 aa14□□□□□ -0.17
VRK3-203ENST00000424804 RESP18Q5W5W9 173 aa14□□□□□ -0.17
VRK3-203ENST00000424804 WSCD1Q658N2 575 aa14□□□□□ -0.17
VRK3-203ENST00000424804 CCDC65Q8IXS2 484 aa14□□□□□ -0.17
VRK3-203ENST00000424804 NOC3LQ8WTT2 800 aaKnown RBP14□□□□□ -0.17
VRK3-203ENST00000424804 ATRIPQ8WXE1 791 aa14□□□□□ -0.17
VRK3-203ENST00000424804 E2F7Q96AV8 911 aa14□□□□□ -0.17
VRK3-203ENST00000424804 CHFRQ96EP1 664 aa14□□□□□ -0.17
VRK3-203ENST00000424804 ZFYVE19Q96K21 471 aa14□□□□□ -0.17
VRK3-203ENST00000424804 FAM84AQ96KN4 292 aa14□□□□□ -0.17
VRK3-203ENST00000424804 SLC46A2Q9BY10 475 aa14□□□□□ -0.17
VRK3-203ENST00000424804 LRRC27Q9C0I9 530 aa14□□□□□ -0.17
VRK3-203ENST00000424804 TNMDQ9H2S6 317 aa14□□□□□ -0.17
VRK3-203ENST00000424804 GDPD2Q9HCC8 539 aa14□□□□□ -0.17
VRK3-203ENST00000424804 PARD6AQ9NPB6 346 aa14□□□□□ -0.17
VRK3-203ENST00000424804 RBM12Q9NTZ6 932 aaKnown RBP14□□□□□ -0.17
VRK3-203ENST00000424804 SMG5Q9UPR3 1016 aaKnown RBP14□□□□□ -0.17
VRK3-203ENST00000424804 ATG2BQ96BY7 2078 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 A0A1B0GVL5 298 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 FRMD3A2A2Y4 597 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 K7ESF4 209 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 F11P03951 625 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 HAPLN1P10915 354 aaPredicted RBP13.99□□□□□ -0.17
VRK3-203ENST00000424804 CASP1P29466 404 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 CYP4F8P98187 520 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 AMPD3Q01432 767 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 SATB1Q01826 763 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 GPR158Q5T848 1215 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 SLFN12LQ6IEE8 588 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 CEP57L1Q8IYX8 460 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 SYCP3Q8IZU3 236 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 RIN3Q8TB24 985 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 PKMYT1Q99640 499 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 IER2Q9BTL4 223 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 FAM126AQ9BYI3 521 aaPredicted RBP13.99□□□□□ -0.17
VRK3-203ENST00000424804 BLZF1Q9H2G9 400 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 ATXN3LQ9H3M9 355 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 CUEDC2Q9H467 287 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 OBP2AQ9NY56 170 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 GTSE1Q9NYZ3 720 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 SERTAD1Q9UHV2 236 aa13.99□□□□□ -0.17
VRK3-203ENST00000424804 SLC38A8A6NNN8 435 aa13.98□□□□□ -0.17
VRK3-203ENST00000424804 HRO43593 1189 aa13.98□□□□□ -0.17
VRK3-203ENST00000424804 PAPSS2O95340 614 aaPredicted RBP13.98□□□□□ -0.17
VRK3-203ENST00000424804 ABCD1P33897 745 aa13.98□□□□□ -0.17
VRK3-203ENST00000424804 TAF6P49848 677 aa13.98□□□□□ -0.17
VRK3-203ENST00000424804 NUCB2P80303 420 aa13.98□□□□□ -0.17
VRK3-203ENST00000424804 TNK2Q07912 1038 aa13.98□□□□□ -0.17
VRK3-203ENST00000424804 PUM1Q14671 1186 aaKnown RBP eCLIP13.98□□□□□ -0.17
VRK3-203ENST00000424804 RSPO4Q2I0M5 234 aaPredicted RBP13.98□□□□□ -0.17
VRK3-203ENST00000424804 ARMCX5Q6P1M9 558 aa13.98□□□□□ -0.17
VRK3-203ENST00000424804 Q6ZS52 159 aa13.98□□□□□ -0.17
VRK3-203ENST00000424804 GRAMD1CQ8IYS0 662 aa13.98□□□□□ -0.17
VRK3-203ENST00000424804 C1orf127Q8N9H9 656 aa13.98□□□□□ -0.17
VRK3-203ENST00000424804 GIPC2Q8TF65 315 aa13.98□□□□□ -0.17
VRK3-203ENST00000424804 HPS3Q969F9 1004 aa13.98□□□□□ -0.17
VRK3-203ENST00000424804 HVCN1Q96D96 273 aa13.98□□□□□ -0.17
VRK3-203ENST00000424804 PYM1Q9BRP8 204 aaKnown RBP13.98□□□□□ -0.17
VRK3-203ENST00000424804 SMG9Q9H0W8 520 aaKnown RBP13.98□□□□□ -0.17
VRK3-203ENST00000424804 SLITRK6Q9H5Y7 841 aa13.98□□□□□ -0.17
VRK3-203ENST00000424804 TASP1Q9H6P5 420 aa13.98□□□□□ -0.17
VRK3-203ENST00000424804 C8orf33Q9H7E9 229 aaPredicted RBP13.98□□□□□ -0.17
VRK3-203ENST00000424804 SEL1LQ9UBV2 794 aa13.98□□□□□ -0.17
VRK3-203ENST00000424804 ZNF638Q14966 1978 aaKnown RBP13.98□□□□□ -0.17
VRK3-203ENST00000424804 GREB1Q4ZG55 1949 aa13.98□□□□□ -0.17
VRK3-203ENST00000424804 ANAPC1Q9H1A4 1944 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms