RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 FIBCD1Q8N539 461 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 AOPEPQ8N6M6 819 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 LRRC52Q8N7C0 313 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 CCDC150Q8NCX0 1101 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 GSTCDQ8NEC7 633 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 HELQQ8TDG4 1101 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 TAF4BQ92750 862 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 CLP1Q92989 425 aaKnown RBP7.57□□□□□ -1.2
EPHA4-206ENST00000424339 LPPQ93052 612 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 BORCS6Q96GS4 357 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 CNOT6LQ96LI5 555 aaKnown RBP7.57□□□□□ -1.2
EPHA4-206ENST00000424339 FAM81BQ96LP2 452 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 ZNF560Q96MR9 790 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 PPP1R10Q96QC0 940 aaKnown RBP7.57□□□□□ -1.2
EPHA4-206ENST00000424339 IMPG2Q9BZV3 1241 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 IKZF4Q9H2S9 585 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 FAM124BQ9H5Z6 455 aaPredicted RBP7.57□□□□□ -1.2
EPHA4-206ENST00000424339 CBX8Q9HC52 389 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 TMEM8AQ9HCN3 771 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 PDE11AQ9HCR9 933 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 RNF19AQ9NV58 838 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 TBC1D13Q9NVG8 400 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 INTS13Q9NVM9 706 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 CXXC1Q9P0U4 656 aaPredicted RBP7.57□□□□□ -1.2
EPHA4-206ENST00000424339 MSRAQ9UJ68 235 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.57□□□□□ -1.2
EPHA4-206ENST00000424339 CEP290O15078 2479 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 PTPRSQ13332 1948 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 KCNJ18B7U540 433 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 PTGESO14684 152 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 TRAPPC3O43617 180 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 ZC3H11AO75152 810 aaKnown RBP eCLIP7.56□□□□□ -1.2
EPHA4-206ENST00000424339 STAU1O95793 577 aaKnown RBP7.56□□□□□ -1.2
EPHA4-206ENST00000424339 AFPP02771 609 aaKnown RBP7.56□□□□□ -1.2
EPHA4-206ENST00000424339 ALDH2P05091 517 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 RB1P06400 928 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 DLATP10515 647 aaKnown RBP7.56□□□□□ -1.2
EPHA4-206ENST00000424339 ZNF18P17022 549 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 ATICP31939 592 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 MTIF2P46199 727 aaKnown RBP7.56□□□□□ -1.2
EPHA4-206ENST00000424339 MXI1P50539 228 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 SCNN1GP51170 649 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 RBP5P82980 135 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 TFAMQ00059 246 aaKnown RBP7.56□□□□□ -1.2
EPHA4-206ENST00000424339 MYO1EQ12965 1108 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 KCNJ12Q14500 433 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 BMS1Q14692 1282 aaKnown RBP7.56□□□□□ -1.2
EPHA4-206ENST00000424339 NCAPHQ15003 741 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 IQCB1Q15051 598 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 ZACNQ401N2 412 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 FILIP1LQ4L180 1135 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 SEZ6Q53EL9 994 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 ZBTB41Q5SVQ8 909 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 C9orf50Q5SZB4 431 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 TCERG1LQ5VWI1 586 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 KRT39Q6A163 491 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 JADE1Q6IE81 842 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 DHX40Q8IX18 779 aaKnown RBP7.56□□□□□ -1.2
EPHA4-206ENST00000424339 TMEM192Q8IY95 271 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 GPR65Q8IYL9 337 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 SPATA18Q8TC71 538 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 SLC35C1Q96A29 364 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 CCDC127Q96BQ5 260 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 MED15Q96RN5 788 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 TUBGCP2Q9BSJ2 902 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 COLEC11Q9BWP8 271 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 FANCLQ9NW38 375 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 DPP3Q9NY33 737 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 KLK14Q9P0G3 267 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 INPP5FQ9Y2H2 1132 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 ZKSCAN5Q9Y2L8 839 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 COQ4Q9Y3A0 265 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 DAAM1Q9Y4D1 1078 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 PCDHB12Q9Y5F1 795 aa7.56□□□□□ -1.2
EPHA4-206ENST00000424339 ANO9A1A5B4 782 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 LRRIQ3A6PVS8 624 aaPredicted RBP7.55□□□□□ -1.2
EPHA4-206ENST00000424339 MEIS3P2A8K0S8 358 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 C5orf67F2Z3F1 127 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 PHACTR2O75167 634 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 POMCP01189 267 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 NFICP08651 508 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 FAM163BP0C2L3 166 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 P4HA1P13674 534 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 RFX1P22670 979 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 FMO5P49326 533 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 TERF1P54274 439 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 UBE3AQ05086 875 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 USP4Q13107 963 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 BIRC3Q13489 604 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 TRPC3Q13507 836 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 NAB2Q15742 525 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 UPP1Q16831 310 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 SGSM1Q2NKQ1 1148 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 SV2CQ496J9 727 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 DCAF17Q5H9S7 520 aaPredicted RBP7.55□□□□□ -1.2
EPHA4-206ENST00000424339 FKBP15Q5T1M5 1219 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 PDXDC1Q6P996 788 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 DCLRE1AQ6PJP8 1040 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 C15orf39Q6ZRI6 1047 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 TRAPPC11Q7Z392 1133 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms