RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 WDR45BQ5MNZ6 344 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 EOGTQ5NDL2 527 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 PEAR1Q5VY43 1037 aaPredicted RBP6.93□□□□□ -1.3
SDCBP-203ENST00000424270 DNAJB7Q7Z6W7 309 aaPredicted RBP6.93□□□□□ -1.3
SDCBP-203ENST00000424270 USP37Q86T82 979 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 TMC8Q8IU68 726 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 ZBTB8OSQ8IWT0 167 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 SPACA3Q8IXA5 215 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 CMTM8Q8IZV2 173 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 MAB21L3Q8N8X9 362 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 FANCBQ8NB91 859 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 EXOC6Q8TAG9 804 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 OLIG1Q8TAK6 271 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 IGDCC4Q8TDY8 1250 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 CCDC12Q8WUD4 166 aaPredicted RBP6.93□□□□□ -1.3
SDCBP-203ENST00000424270 FGF11Q92914 225 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 WBP1Q96G27 269 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 TMEM176AQ96HP8 235 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 DRC1Q96MC2 740 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 CEP89Q96ST8 783 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 SEPT5Q99719 369 aaPredicted RBP6.93□□□□□ -1.3
SDCBP-203ENST00000424270 FAM83CQ9BQN1 747 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 ECT2Q9H8V3 914 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 CPNE5Q9HCH3 593 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 BARHL2Q9NY43 387 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 ASB3Q9Y575 518 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 ADAMTS9Q9P2N4 1935 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 PLXNB3Q9ULL4 1909 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 CELSR3Q9NYQ7 3312 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 CFAP46Q8IYW2 2715 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 A0A1B0GUA9 196 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 PODXLO00592 558 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 TNFSF14O43557 240 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 CBFA2T3O75081 653 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 CYP21A2P08686 494 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 OR4Q2P0C623 313 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 IGFBP6P24592 240 aaPredicted RBP6.92□□□□□ -1.3
SDCBP-203ENST00000424270 MAOBP27338 520 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 YWHABP31946 246 aaKnown RBP6.92□□□□□ -1.3
SDCBP-203ENST00000424270 CCR10P46092 362 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 CLK2P49760 499 aaKnown RBP6.92□□□□□ -1.3
SDCBP-203ENST00000424270 USP11P51784 963 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 RIPPLY3P57055 190 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 ANTXR2P58335 489 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 HNRNPUQ00839 825 aaKnown RBP eCLIP6.92□□□□□ -1.3
SDCBP-203ENST00000424270 PRPF4BQ13523 1007 aaKnown RBP6.92□□□□□ -1.3
SDCBP-203ENST00000424270 SMAD1Q15797 465 aaKnown RBP6.92□□□□□ -1.3
SDCBP-203ENST00000424270 UPP1Q16831 310 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 MAP7D1Q3KQU3 841 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 TMEM92Q6UXU6 159 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 ATG14Q6ZNE5 492 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 GAREM2Q75VX8 874 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 APBB1IPQ7Z5R6 666 aaPredicted RBP6.92□□□□□ -1.3
SDCBP-203ENST00000424270 TMPRSS12Q86WS5 348 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 ZNF513Q8N8E2 541 aaPredicted RBP6.92□□□□□ -1.3
SDCBP-203ENST00000424270 C3orf58Q8NDZ4 430 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 SLC5A5Q92911 643 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 DHX33Q9H6R0 707 aaKnown RBP6.92□□□□□ -1.3
SDCBP-203ENST00000424270 KIF9Q9HAQ2 790 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 IL21RQ9HBE5 538 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 TRPC7Q9HCX4 862 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 TDP1Q9NUW8 608 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 SLC38A7Q9NVC3 462 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 PRMT7Q9NVM4 692 aaPredicted RBP6.92□□□□□ -1.3
SDCBP-203ENST00000424270 RBM28Q9NW13 759 aaKnown RBP6.92□□□□□ -1.3
SDCBP-203ENST00000424270 FTSJ1Q9UET6 329 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 CYP8B1Q9UNU6 501 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 CCL26Q9Y258 94 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 PPME1Q9Y570 386 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 GTF3C3Q9Y5Q9 886 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 WNT6Q9Y6F9 365 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 PCNX2A6NKB5 2137 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 ABCA7Q8IZY2 2146 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 MYO9AB2RTY4 2548 aa6.92□□□□□ -1.3
SDCBP-203ENST00000424270 MUC22E2RYF6 1773 aaPredicted RBP6.92□□□□□ -1.3
SDCBP-203ENST00000424270 KIF26AQ9ULI4 1882 aaPredicted RBP6.92□□□□□ -1.3
SDCBP-203ENST00000424270 MYMKA6NI61 221 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 CILPO75339 1184 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 GJB3O75712 270 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 SOAT2O75908 522 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 STBD1O95210 358 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 GNA11P29992 359 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 MCM5P33992 734 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 CDR1P51861 262 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 EMP3P54852 163 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 MRPS21P82921 87 aaKnown RBP6.91□□□□□ -1.3
SDCBP-203ENST00000424270 YWHAHQ04917 246 aaPredicted RBP6.91□□□□□ -1.3
SDCBP-203ENST00000424270 CAPSQ13938 189 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 UBAP2LQ14157 1087 aaKnown RBP6.91□□□□□ -1.3
SDCBP-203ENST00000424270 MTF1Q14872 753 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 INAVAQ3KP66 663 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 MGAT5BQ3V5L5 792 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 ARMCX5Q6P1M9 558 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 IL27RAQ6UWB1 636 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 ZCCHC9Q8N567 271 aaKnown RBP6.91□□□□□ -1.3
SDCBP-203ENST00000424270 SNIP1Q8TAD8 396 aaKnown RBP6.91□□□□□ -1.3
SDCBP-203ENST00000424270 BICD2Q8TD16 824 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 ASAP3Q8TDY4 903 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 MRPS31Q92665 395 aaKnown RBP6.91□□□□□ -1.3
SDCBP-203ENST00000424270 EZH1Q92800 747 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 236.3 ms