RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 ITGB3P05106 788 aa15.03■□□□□ -0
ACTN4-203ENST00000424234 CYP3A5P20815 502 aa15.03■□□□□ -0
ACTN4-203ENST00000424234 SOX5P35711 763 aa15.03■□□□□ -0
ACTN4-203ENST00000424234 MLLT1Q03111 559 aaPredicted RBP15.03■□□□□ -0
ACTN4-203ENST00000424234 TUSC3Q13454 348 aa15.03■□□□□ -0
ACTN4-203ENST00000424234 BIRC3Q13489 604 aa15.03■□□□□ -0
ACTN4-203ENST00000424234 ZNF280BQ86YH2 543 aa15.03■□□□□ -0
ACTN4-203ENST00000424234 CMTR2Q8IYT2 770 aaKnown RBP15.03■□□□□ -0
ACTN4-203ENST00000424234 TAS1R2Q8TE23 839 aa15.03■□□□□ -0
ACTN4-203ENST00000424234 INTS2Q9H0H0 1204 aaKnown RBP15.03■□□□□ -0
ACTN4-203ENST00000424234 MED4Q9NPJ6 270 aa15.03■□□□□ -0
ACTN4-203ENST00000424234 DPP3Q9NY33 737 aa15.03■□□□□ -0
ACTN4-203ENST00000424234 KANSL3Q9P2N6 904 aa15.03■□□□□ -0
ACTN4-203ENST00000424234 PRDM4Q9UKN5 801 aa15.03■□□□□ -0
ACTN4-203ENST00000424234 ITGA11Q9UKX5 1188 aa15.03■□□□□ -0
ACTN4-203ENST00000424234 MYO7AQ13402 2215 aa15.03■□□□□ -0
ACTN4-203ENST00000424234 CASTOR2A6NHX0 329 aa15.02■□□□□ -0
ACTN4-203ENST00000424234 PPEF2O14830 753 aa15.02■□□□□ -0
ACTN4-203ENST00000424234 H2AFZP0C0S5 128 aa15.02■□□□□ -0
ACTN4-203ENST00000424234 TNFRSF8P28908 595 aa15.02■□□□□ -0
ACTN4-203ENST00000424234 LRPAP1P30533 357 aa15.02■□□□□ -0
ACTN4-203ENST00000424234 CXCR5P32302 372 aa15.02■□□□□ -0
ACTN4-203ENST00000424234 PIK3CAP42336 1068 aa15.02■□□□□ -0
ACTN4-203ENST00000424234 TNNT3P45378 269 aaPredicted RBP15.02■□□□□ -0
ACTN4-203ENST00000424234 RNASELQ05823 741 aaKnown RBP15.02■□□□□ -0
ACTN4-203ENST00000424234 EPC2Q52LR7 807 aa15.02■□□□□ -0
ACTN4-203ENST00000424234 HSP90B2PQ58FF3 399 aa15.02■□□□□ -0
ACTN4-203ENST00000424234 FAM109BQ6ICB4 259 aaPredicted RBP15.02■□□□□ -0
ACTN4-203ENST00000424234 H2AFVQ71UI9 128 aa15.02■□□□□ -0
ACTN4-203ENST00000424234 COLGALT2Q8IYK4 626 aa15.02■□□□□ -0
ACTN4-203ENST00000424234 FAM71BQ8TC56 605 aa15.02■□□□□ -0
ACTN4-203ENST00000424234 TAF4BQ92750 862 aa15.02■□□□□ -0
ACTN4-203ENST00000424234 YME1L1Q96TA2 773 aa15.02■□□□□ -0
ACTN4-203ENST00000424234 PAAF1Q9BRP4 392 aa15.02■□□□□ -0
ACTN4-203ENST00000424234 NRDE2Q9H7Z3 1164 aa15.02■□□□□ -0
ACTN4-203ENST00000424234 DNAJB4Q9UDY4 337 aa15.02■□□□□ -0
ACTN4-203ENST00000424234 COQ4Q9Y3A0 265 aa15.02■□□□□ -0
ACTN4-203ENST00000424234 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.02■□□□□ -0
ACTN4-203ENST00000424234 F8VZ95 297 aa15.02□□□□□ -0.01
ACTN4-203ENST00000424234 P4HA2O15460 535 aa15.02□□□□□ -0.01
ACTN4-203ENST00000424234 LRRN2O75325 713 aa15.02□□□□□ -0.01
ACTN4-203ENST00000424234 FTCDO95954 541 aa15.02□□□□□ -0.01
ACTN4-203ENST00000424234 HLA-DRAP01903 254 aa15.02□□□□□ -0.01
ACTN4-203ENST00000424234 POLR2BP30876 1174 aaKnown RBP15.02□□□□□ -0.01
ACTN4-203ENST00000424234 BMP8BP34820 402 aa15.02□□□□□ -0.01
ACTN4-203ENST00000424234 AARSP49588 968 aaKnown RBP eCLIP15.02□□□□□ -0.019e-10■■■■■ 48
ACTN4-203ENST00000424234 C9orf57Q5W0N0 161 aa15.02□□□□□ -0.01
ACTN4-203ENST00000424234 GJB7Q6PEY0 223 aa15.02□□□□□ -0.01
ACTN4-203ENST00000424234 FBXL13Q8NEE6 735 aa15.02□□□□□ -0.01
ACTN4-203ENST00000424234 SEMA4DQ92854 862 aa15.02□□□□□ -0.01
ACTN4-203ENST00000424234 PSMB7Q99436 277 aa15.02□□□□□ -0.01
ACTN4-203ENST00000424234 LRRC1Q9BTT6 524 aa15.02□□□□□ -0.01
ACTN4-203ENST00000424234 APEX2Q9UBZ4 518 aa15.02□□□□□ -0.01
ACTN4-203ENST00000424234 DNAJC12Q9UKB3 198 aa15.02□□□□□ -0.01
ACTN4-203ENST00000424234 DDX3XO00571 662 aaKnown RBP eCLIP15.01□□□□□ -0.017e-32■□□□□ 8.2
ACTN4-203ENST00000424234 ZC3H11AO75152 810 aaKnown RBP eCLIP15.01□□□□□ -0.01
ACTN4-203ENST00000424234 KRT19P08727 400 aa15.01□□□□□ -0.01
ACTN4-203ENST00000424234 CLCNKBP51801 687 aa15.01□□□□□ -0.01
ACTN4-203ENST00000424234 CETN1Q12798 172 aa15.01□□□□□ -0.01
ACTN4-203ENST00000424234 NCOA4Q13772 614 aa15.01□□□□□ -0.01
ACTN4-203ENST00000424234 BTG3Q14201 252 aaPredicted RBP15.01□□□□□ -0.01
ACTN4-203ENST00000424234 DRAP1Q14919 205 aaPredicted RBP15.01□□□□□ -0.01
ACTN4-203ENST00000424234 RPS6KA1Q15418 735 aa15.01□□□□□ -0.01
ACTN4-203ENST00000424234 C8orf74Q6P047 294 aa15.01□□□□□ -0.01
ACTN4-203ENST00000424234 SP7Q8TDD2 431 aaPredicted RBP15.01□□□□□ -0.01
ACTN4-203ENST00000424234 AENQ8WTP8 325 aaKnown RBP15.01□□□□□ -0.01
ACTN4-203ENST00000424234 EXOC4Q96A65 974 aa15.01□□□□□ -0.01
ACTN4-203ENST00000424234 PBKQ96KB5 322 aa15.01□□□□□ -0.01
ACTN4-203ENST00000424234 FAM193BQ96PV7 902 aaPredicted RBP15.01□□□□□ -0.01
ACTN4-203ENST00000424234 ZBED2Q9BTP6 218 aa15.01□□□□□ -0.01
ACTN4-203ENST00000424234 PRO3102Q9H379 93 aa15.01□□□□□ -0.01
ACTN4-203ENST00000424234 CWH43Q9H720 699 aa15.01□□□□□ -0.01
ACTN4-203ENST00000424234 PSD3Q9NYI0 1048 aa15.01□□□□□ -0.01
ACTN4-203ENST00000424234 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.01□□□□□ -0.01
ACTN4-203ENST00000424234 HPCAL4Q9UM19 191 aa15.01□□□□□ -0.01
ACTN4-203ENST00000424234 INSL6Q9Y581 213 aa15.01□□□□□ -0.01
ACTN4-203ENST00000424234 MRPL42Q9Y6G3 142 aaKnown RBP15.01□□□□□ -0.01
ACTN4-203ENST00000424234 MTCL1Q9Y4B5 1905 aaKnown RBP15.01□□□□□ -0.01
ACTN4-203ENST00000424234 CHD7Q9P2D1 2997 aa15□□□□□ -0.01
ACTN4-203ENST00000424234 LCHNA4D1U4 455 aa15□□□□□ -0.01
ACTN4-203ENST00000424234 PODXLO00592 558 aa15□□□□□ -0.01
ACTN4-203ENST00000424234 PIRO00625 290 aa15□□□□□ -0.01
ACTN4-203ENST00000424234 TLL1O43897 1013 aa15□□□□□ -0.01
ACTN4-203ENST00000424234 PHACTR2O75167 634 aa15□□□□□ -0.01
ACTN4-203ENST00000424234 CST3P01034 146 aaPredicted RBP15□□□□□ -0.01
ACTN4-203ENST00000424234 NOP2P46087 812 aaKnown RBP15□□□□□ -0.01
ACTN4-203ENST00000424234 UPP1Q16831 310 aa15□□□□□ -0.01
ACTN4-203ENST00000424234 SYCE1Q8N0S2 351 aa15□□□□□ -0.01
ACTN4-203ENST00000424234 C3orf58Q8NDZ4 430 aa15□□□□□ -0.01
ACTN4-203ENST00000424234 SLC30A5Q8TAD4 765 aa15□□□□□ -0.01
ACTN4-203ENST00000424234 LMO3Q8TAP4 145 aa15□□□□□ -0.01
ACTN4-203ENST00000424234 UROC1Q96N76 676 aa15□□□□□ -0.01
ACTN4-203ENST00000424234 RAD9AQ99638 391 aa15□□□□□ -0.01
ACTN4-203ENST00000424234 XYLT2Q9H1B5 865 aa15□□□□□ -0.01
ACTN4-203ENST00000424234 RBM12Q9NTZ6 932 aaKnown RBP15□□□□□ -0.01
ACTN4-203ENST00000424234 STIM2Q9P246 746 aa15□□□□□ -0.01
ACTN4-203ENST00000424234 AGAP1Q9UPQ3 857 aa15□□□□□ -0.01
ACTN4-203ENST00000424234 CHD9Q3L8U1 2897 aa15□□□□□ -0.01
ACTN4-203ENST00000424234 NCANO14594 1321 aa15□□□□□ -0.01
ACTN4-203ENST00000424234 PLXNA3P51805 1871 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms