RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 FAM50BQ9Y247 325 aa19.77■□□□□ 0.76
HDAC6-205ENST00000423941 MTMR11A4FU01 709 aa19.76■□□□□ 0.75
HDAC6-205ENST00000423941 CPB1P15086 417 aa19.76■□□□□ 0.75
HDAC6-205ENST00000423941 IL9P15248 144 aa19.76■□□□□ 0.75
HDAC6-205ENST00000423941 PCSK1P29120 753 aa19.76■□□□□ 0.75
HDAC6-205ENST00000423941 ASPAP45381 313 aa19.76■□□□□ 0.75
HDAC6-205ENST00000423941 MYL7Q01449 175 aa19.76■□□□□ 0.75
HDAC6-205ENST00000423941 ADCY1Q08828 1119 aa19.76■□□□□ 0.75
HDAC6-205ENST00000423941 INTS6LQ5JSJ4 861 aaKnown RBP19.76■□□□□ 0.75
HDAC6-205ENST00000423941 SPOPLQ6IQ16 392 aa19.76■□□□□ 0.75
HDAC6-205ENST00000423941 CES5AQ6NT32 575 aa19.76■□□□□ 0.75
HDAC6-205ENST00000423941 TMC5Q6UXY8 1006 aa19.76■□□□□ 0.75
HDAC6-205ENST00000423941 LMO3Q8TAP4 145 aa19.76■□□□□ 0.75
HDAC6-205ENST00000423941 SLC7A14Q8TBB6 771 aa19.76■□□□□ 0.75
HDAC6-205ENST00000423941 C2orf15Q8WU43 125 aaKnown RBP19.76■□□□□ 0.75
HDAC6-205ENST00000423941 ELMO3Q96BJ8 720 aa19.76■□□□□ 0.75
HDAC6-205ENST00000423941 PI4K2AQ9BTU6 479 aa19.76■□□□□ 0.75
HDAC6-205ENST00000423941 FUCA2Q9BTY2 467 aa19.76■□□□□ 0.75
HDAC6-205ENST00000423941 CRISPLD1Q9H336 500 aa19.76■□□□□ 0.75
HDAC6-205ENST00000423941 NXF1Q9UBU9 619 aaKnown RBP19.76■□□□□ 0.75
HDAC6-205ENST00000423941 CDH9Q9ULB4 789 aa19.76■□□□□ 0.75
HDAC6-205ENST00000423941 PTPRDP23468 1912 aa19.75■□□□□ 0.75
HDAC6-205ENST00000423941 HCRTO43612 131 aa19.75■□□□□ 0.75
HDAC6-205ENST00000423941 GNL1P36915 607 aaPredicted RBP19.75■□□□□ 0.75
HDAC6-205ENST00000423941 MTHFRP42898 656 aa19.75■□□□□ 0.75
HDAC6-205ENST00000423941 CDH8P55286 799 aa19.75■□□□□ 0.75
HDAC6-205ENST00000423941 NOP14P78316 857 aaKnown RBP19.75■□□□□ 0.75
HDAC6-205ENST00000423941 KCNH2Q12809 1159 aa19.75■□□□□ 0.75
HDAC6-205ENST00000423941 CBX2Q14781 532 aaPredicted RBP19.75■□□□□ 0.75
HDAC6-205ENST00000423941 STX1AQ16623 288 aa19.75■□□□□ 0.75
HDAC6-205ENST00000423941 SKOR2Q2VWA4 1001 aaPredicted RBP19.75■□□□□ 0.75
HDAC6-205ENST00000423941 ATAT1Q5SQI0 421 aa19.75■□□□□ 0.75
HDAC6-205ENST00000423941 LIN9Q5TKA1 542 aa19.75■□□□□ 0.75
HDAC6-205ENST00000423941 C11orf57Q6ZUT1 292 aaPredicted RBP19.75■□□□□ 0.75
HDAC6-205ENST00000423941 DCP1BQ8IZD4 617 aaKnown RBP19.75■□□□□ 0.75
HDAC6-205ENST00000423941 ATAD1Q8NBU5 361 aa19.75■□□□□ 0.75
HDAC6-205ENST00000423941 CNOT6LQ96LI5 555 aaKnown RBP19.75■□□□□ 0.75
HDAC6-205ENST00000423941 NECTIN4Q96NY8 510 aa19.75■□□□□ 0.75
HDAC6-205ENST00000423941 APOL5Q9BWW9 433 aa19.75■□□□□ 0.75
HDAC6-205ENST00000423941 SMYD3Q9H7B4 428 aa19.75■□□□□ 0.75
HDAC6-205ENST00000423941 MMRN2Q9H8L6 949 aa19.75■□□□□ 0.75
HDAC6-205ENST00000423941 TMLHEQ9NVH6 421 aa19.75■□□□□ 0.75
HDAC6-205ENST00000423941 PRKAG3Q9UGI9 489 aa19.75■□□□□ 0.75
HDAC6-205ENST00000423941 CDH22Q9UJ99 828 aa19.75■□□□□ 0.75
HDAC6-205ENST00000423941 N4BP1O75113 896 aaKnown RBP19.74■□□□□ 0.75
HDAC6-205ENST00000423941 ATP2C2O75185 946 aa19.74■□□□□ 0.75
HDAC6-205ENST00000423941 LETM1O95202 739 aaPredicted RBP19.74■□□□□ 0.75
HDAC6-205ENST00000423941 P4HA1P13674 534 aa19.74■□□□□ 0.75
HDAC6-205ENST00000423941 ELF1P32519 619 aa19.74■□□□□ 0.75
HDAC6-205ENST00000423941 TYRO3Q06418 890 aa19.74■□□□□ 0.75
HDAC6-205ENST00000423941 PPM1LQ5SGD2 360 aa19.74■□□□□ 0.75
HDAC6-205ENST00000423941 SPPL2BQ8TCT7 592 aa19.74■□□□□ 0.75
HDAC6-205ENST00000423941 RIPOR3Q96MK2 946 aa19.74■□□□□ 0.75
HDAC6-205ENST00000423941 IMPG2Q9BZV3 1241 aa19.74■□□□□ 0.75
HDAC6-205ENST00000423941 FAM124BQ9H5Z6 455 aaPredicted RBP19.74■□□□□ 0.75
HDAC6-205ENST00000423941 CYP3A43Q9HB55 503 aa19.74■□□□□ 0.75
HDAC6-205ENST00000423941 CYP4F11Q9HBI6 524 aa19.74■□□□□ 0.75
HDAC6-205ENST00000423941 CRTAC1Q9NQ79 661 aa19.74■□□□□ 0.75
HDAC6-205ENST00000423941 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.74■□□□□ 0.75
HDAC6-205ENST00000423941 INSL5Q9Y5Q6 135 aa19.74■□□□□ 0.75
HDAC6-205ENST00000423941 MYBPHLA2RUH7 354 aa19.73■□□□□ 0.75
HDAC6-205ENST00000423941 C19orf67A6NJJ6 358 aa19.73■□□□□ 0.75
HDAC6-205ENST00000423941 ACAT1P24752 427 aaKnown RBP19.73■□□□□ 0.75
HDAC6-205ENST00000423941 TSPY1Q01534 308 aa19.73■□□□□ 0.75
HDAC6-205ENST00000423941 INCA1Q0VD86 236 aa19.73■□□□□ 0.75
HDAC6-205ENST00000423941 DUSP4Q13115 394 aa19.73■□□□□ 0.75
HDAC6-205ENST00000423941 NFE2Q16621 373 aaPredicted RBP19.73■□□□□ 0.75
HDAC6-205ENST00000423941 SLC39A12Q504Y0 691 aa19.73■□□□□ 0.75
HDAC6-205ENST00000423941 CDKAL1Q5VV42 579 aa19.73■□□□□ 0.75
HDAC6-205ENST00000423941 CRYBG2Q8N1P7 616 aa19.73■□□□□ 0.75
HDAC6-205ENST00000423941 SMG7Q92540 1137 aaKnown RBP19.73■□□□□ 0.75
HDAC6-205ENST00000423941 PGLYRP2Q96PD5 576 aa19.73■□□□□ 0.75
HDAC6-205ENST00000423941 PHF7Q9BWX1 381 aaPredicted RBP19.73■□□□□ 0.75
HDAC6-205ENST00000423941 NIF3L1Q9GZT8 377 aa19.73■□□□□ 0.75
HDAC6-205ENST00000423941 POMKQ9H5K3 350 aa19.73■□□□□ 0.75
HDAC6-205ENST00000423941 WDR6Q9NNW5 1121 aaKnown RBP19.73■□□□□ 0.75
HDAC6-205ENST00000423941 ABCB6Q9NP58 842 aa19.73■□□□□ 0.75
HDAC6-205ENST00000423941 SAMSN1Q9NSI8 373 aaKnown RBP19.73■□□□□ 0.75
HDAC6-205ENST00000423941 GTF3C4Q9UKN8 822 aa19.73■□□□□ 0.75
HDAC6-205ENST00000423941 NFE2L3Q9Y4A8 694 aa19.73■□□□□ 0.75
HDAC6-205ENST00000423941 PRRG1O14668 218 aa19.72■□□□□ 0.75
HDAC6-205ENST00000423941 AFPP02771 609 aaKnown RBP19.72■□□□□ 0.75
HDAC6-205ENST00000423941 PDGFRBP09619 1106 aa19.72■□□□□ 0.75
HDAC6-205ENST00000423941 WEE2P0C1S8 567 aa19.72■□□□□ 0.75
HDAC6-205ENST00000423941 NCAPHQ15003 741 aa19.72■□□□□ 0.75
HDAC6-205ENST00000423941 CFAP221Q4G0U5 840 aa19.72■□□□□ 0.75
HDAC6-205ENST00000423941 UNC93AQ86WB7 457 aa19.72■□□□□ 0.75
HDAC6-205ENST00000423941 FAM114A1Q8IWE2 563 aa19.72■□□□□ 0.75
HDAC6-205ENST00000423941 ADHFE1Q8IWW8 467 aa19.72■□□□□ 0.75
HDAC6-205ENST00000423941 TTC9BQ8N6N2 239 aa19.72■□□□□ 0.75
HDAC6-205ENST00000423941 OR6B3Q8NGW1 331 aa19.72■□□□□ 0.75
HDAC6-205ENST00000423941 TATDN2Q93075 761 aa19.72■□□□□ 0.75
HDAC6-205ENST00000423941 FUBP3Q96I24 572 aaKnown RBP eCLIP19.72■□□□□ 0.75
HDAC6-205ENST00000423941 SYT15Q9BQS2 421 aa19.72■□□□□ 0.75
HDAC6-205ENST00000423941 SNX25Q9H3E2 840 aa19.72■□□□□ 0.75
HDAC6-205ENST00000423941 AVENQ9NQS1 362 aaPredicted RBP19.72■□□□□ 0.75
HDAC6-205ENST00000423941 HAPLN1P10915 354 aaPredicted RBP19.71■□□□□ 0.75
HDAC6-205ENST00000423941 PTPN1P18031 435 aaKnown RBP19.71■□□□□ 0.75
HDAC6-205ENST00000423941 RAP1GAPP47736 663 aa19.71■□□□□ 0.75
HDAC6-205ENST00000423941 TUFMP49411 452 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms