RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 OR10T2Q8NGX3 314 aa18.16■□□□□ 0.5
CHCHD3-202ENST00000423635 ATG2BQ96BY7 2078 aa18.16■□□□□ 0.5
CHCHD3-202ENST00000423635 SENP8Q96LD8 212 aa18.16■□□□□ 0.5
CHCHD3-202ENST00000423635 GCNAQ96QF7 691 aa18.16■□□□□ 0.5
CHCHD3-202ENST00000423635 TBX20Q9UMR3 447 aa18.16■□□□□ 0.5
CHCHD3-202ENST00000423635 CYP11A1P05108 521 aa18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 ODC1P11926 461 aa18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 PLS3P13797 630 aa18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 CSRP1P21291 193 aaKnown RBP18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 SMTNP53814 917 aa18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 GUCY1B3Q02153 619 aa18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 ZNF252P-AS1Q0IIN9 211 aa18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 FOXC1Q12948 553 aa18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 KYAT1Q16773 422 aa18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 MGAT5BQ3V5L5 792 aa18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 SH3PXD2AQ5TCZ1 1133 aa18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 SPATA1Q5VX52 437 aa18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 TRIM68Q6AZZ1 485 aa18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 TMEM150AQ86TG1 271 aa18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 KCNN1Q92952 543 aa18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 USP13Q92995 863 aaPredicted RBP18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 HHIPQ96QV1 700 aa18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 ADAM33Q9BZ11 813 aa18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 RAB34Q9BZG1 259 aa18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 ZCWPW1Q9H0M4 648 aa18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 CCL26Q9Y258 94 aa18.15■□□□□ 0.5
CHCHD3-202ENST00000423635 LNP1A1A4G5 178 aa18.14■□□□□ 0.49
CHCHD3-202ENST00000423635 PPEF2O14830 753 aa18.14■□□□□ 0.49
CHCHD3-202ENST00000423635 DCLK1O15075 740 aa18.14■□□□□ 0.49
CHCHD3-202ENST00000423635 F11P03951 625 aa18.14■□□□□ 0.49
CHCHD3-202ENST00000423635 DDX6P26196 483 aaKnown RBP eCLIP18.14■□□□□ 0.49
CHCHD3-202ENST00000423635 AVPR1AP37288 418 aa18.14■□□□□ 0.49
CHCHD3-202ENST00000423635 TNFSF9P41273 254 aa18.14■□□□□ 0.49
CHCHD3-202ENST00000423635 GUCY2FP51841 1108 aa18.14■□□□□ 0.49
CHCHD3-202ENST00000423635 PPP2R3AQ06190 1150 aa18.14■□□□□ 0.49
CHCHD3-202ENST00000423635 SMARCB1Q12824 385 aa18.14■□□□□ 0.49
CHCHD3-202ENST00000423635 ACAP1Q15027 740 aa18.14■□□□□ 0.49
CHCHD3-202ENST00000423635 C2orf15Q8WU43 125 aaKnown RBP18.14■□□□□ 0.49
CHCHD3-202ENST00000423635 EXOC4Q96A65 974 aa18.14■□□□□ 0.49
CHCHD3-202ENST00000423635 SEPT5Q99719 369 aaPredicted RBP18.14■□□□□ 0.49
CHCHD3-202ENST00000423635 P2RY13Q9BPV8 354 aa18.14■□□□□ 0.49
CHCHD3-202ENST00000423635 KIF9Q9HAQ2 790 aa18.14■□□□□ 0.49
CHCHD3-202ENST00000423635 TDP1Q9NUW8 608 aa18.14■□□□□ 0.49
CHCHD3-202ENST00000423635 WDFY3Q8IZQ1 3526 aa18.13■□□□□ 0.49
CHCHD3-202ENST00000423635 PIRO00625 290 aa18.13■□□□□ 0.49
CHCHD3-202ENST00000423635 CDX4O14627 284 aaPredicted RBP18.13■□□□□ 0.49
CHCHD3-202ENST00000423635 FAM189A1O60320 539 aa18.13■□□□□ 0.49
CHCHD3-202ENST00000423635 APBB3O95704 486 aa18.13■□□□□ 0.49
CHCHD3-202ENST00000423635 HAPLN1P10915 354 aaPredicted RBP18.13■□□□□ 0.49
CHCHD3-202ENST00000423635 GJA4P35212 333 aa18.13■□□□□ 0.49
CHCHD3-202ENST00000423635 ST3GAL1Q11201 340 aa18.13■□□□□ 0.49
CHCHD3-202ENST00000423635 ZNF268Q14587 947 aaPredicted RBP18.13■□□□□ 0.49
CHCHD3-202ENST00000423635 PDGFRLQ15198 375 aa18.13■□□□□ 0.49
CHCHD3-202ENST00000423635 TAF12Q16514 161 aa18.13■□□□□ 0.49
CHCHD3-202ENST00000423635 SLC39A12Q504Y0 691 aa18.13■□□□□ 0.49
CHCHD3-202ENST00000423635 KRT79Q5XKE5 535 aa18.13■□□□□ 0.49
CHCHD3-202ENST00000423635 KCNK18Q7Z418 384 aa18.13■□□□□ 0.49
CHCHD3-202ENST00000423635 C11orf74Q86VG3 221 aa18.13■□□□□ 0.49
CHCHD3-202ENST00000423635 MAB21L3Q8N8X9 362 aa18.13■□□□□ 0.49
CHCHD3-202ENST00000423635 RPLP0P6Q8NHW5 317 aa18.13■□□□□ 0.49
CHCHD3-202ENST00000423635 GATA6Q92908 595 aa18.13■□□□□ 0.49
CHCHD3-202ENST00000423635 KHNYNO15037 678 aaKnown RBP18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 ARSAP15289 507 aa18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 HMGA1P17096 107 aaKnown RBP18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 SPINK2P20155 84 aa18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 MATR3P43243 847 aaKnown RBP eCLIP18.12■□□□□ 0.491e-6■■■■□ 20.4
CHCHD3-202ENST00000423635 NLRP12P59046 1061 aa18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 BFSP1Q12934 665 aa18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 DMC1Q14565 340 aa18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 ENOX2Q16206 610 aaKnown RBP18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 C9orf57Q5W0N0 161 aa18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 PMS2CLQ68D20 193 aa18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 LRRTM3Q86VH5 581 aa18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 CD302Q8IX05 232 aa18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 RIN3Q8TB24 985 aa18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 SPPL2BQ8TCT7 592 aa18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 GIPC2Q8TF65 315 aa18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 EZH1Q92800 747 aaPredicted RBP18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 C8orf76Q96K31 380 aa18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 MMTAG2Q9BU76 263 aaKnown RBP18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 TMEM9BQ9NQ34 198 aa18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 DSEQ9UL01 958 aa18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 ZFYVE26Q68DK2 2539 aa18.12■□□□□ 0.49
CHCHD3-202ENST00000423635 IGF2RP11717 2491 aa18.11■□□□□ 0.49
CHCHD3-202ENST00000423635 ANO9A1A5B4 782 aa18.11■□□□□ 0.49
CHCHD3-202ENST00000423635 SRRM3A6NNA2 597 aaPredicted RBP18.11■□□□□ 0.49
CHCHD3-202ENST00000423635 TOP3BO95985 862 aaKnown RBP18.11■□□□□ 0.49
CHCHD3-202ENST00000423635 CDC25AP30304 524 aa18.11■□□□□ 0.49
CHCHD3-202ENST00000423635 CC2D1AQ6P1N0 951 aaPredicted RBP18.11■□□□□ 0.49
CHCHD3-202ENST00000423635 MON1AQ86VX9 555 aa18.11■□□□□ 0.49
CHCHD3-202ENST00000423635 KCTD17Q8N5Z5 321 aa18.11■□□□□ 0.49
CHCHD3-202ENST00000423635 SYT2Q8N9I0 419 aaPredicted RBP18.11■□□□□ 0.49
CHCHD3-202ENST00000423635 FBXO18Q8NFZ0 1043 aa18.11■□□□□ 0.49
CHCHD3-202ENST00000423635 ACDQ96AP0 544 aa18.11■□□□□ 0.49
CHCHD3-202ENST00000423635 SCNM1Q9BWG6 230 aa18.11■□□□□ 0.49
CHCHD3-202ENST00000423635 ECT2Q9H8V3 914 aa18.11■□□□□ 0.49
CHCHD3-202ENST00000423635 RPF1Q9H9Y2 349 aaKnown RBP18.11■□□□□ 0.49
CHCHD3-202ENST00000423635 DENND4CQ5VZ89 1909 aa18.1■□□□□ 0.49
CHCHD3-202ENST00000423635 PP2D1A8MPX8 630 aa18.1■□□□□ 0.49
CHCHD3-202ENST00000423635 H0YCG3 227 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms