RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 MKNK1Q9BUB5 465 aa17.43■□□□□ 0.38
COL18A1-205ENST00000423214 GTF3C3Q9Y5Q9 886 aa17.43■□□□□ 0.38
COL18A1-205ENST00000423214 GCNT3O95395 438 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 PRAMEF12O95522 483 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 TDGF1P13385 188 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 SDHBP21912 280 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 CTHP32929 405 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 PNPLA4P41247 253 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 TSPY1Q01534 308 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 SATB1Q01826 763 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 POU5F1Q01860 360 aaKnown RBP17.42■□□□□ 0.38
COL18A1-205ENST00000423214 LMNB2Q03252 620 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 RRAGBQ5VZM2 374 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 WSCD1Q658N2 575 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 MAMSTRQ6ZN01 415 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 PRR23BQ6ZRT6 265 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 SV2BQ7L1I2 683 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 ZNF720Q7Z2F6 126 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 RALGPS2Q86X27 583 aaPredicted RBP17.42■□□□□ 0.38
COL18A1-205ENST00000423214 DCP1BQ8IZD4 617 aaKnown RBP17.42■□□□□ 0.38
COL18A1-205ENST00000423214 SPEM1Q8N4L4 309 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 TTC8Q8TAM2 541 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 BPIFB1Q8TDL5 484 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 GIPC2Q8TF65 315 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 ZFYVE19Q96K21 471 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 ACCSQ96QU6 501 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 TASP1Q9H6P5 420 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 DLL3Q9NYJ7 618 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 CDV3Q9UKY7 258 aaKnown RBP17.42■□□□□ 0.38
COL18A1-205ENST00000423214 CLIC4Q9Y696 253 aa17.42■□□□□ 0.38
COL18A1-205ENST00000423214 KPNA7A9QM74 516 aa17.41■□□□□ 0.38
COL18A1-205ENST00000423214 LPAL2Q16609 132 aa17.41■□□□□ 0.38
COL18A1-205ENST00000423214 DGKKQ5KSL6 1271 aa17.41■□□□□ 0.38
COL18A1-205ENST00000423214 L1TD1Q5T7N2 865 aaKnown RBP17.41■□□□□ 0.38
COL18A1-205ENST00000423214 USP49Q70CQ1 688 aa17.41■□□□□ 0.38
COL18A1-205ENST00000423214 NOC3LQ8WTT2 800 aaKnown RBP17.41■□□□□ 0.38
COL18A1-205ENST00000423214 SAAL1Q96ER3 474 aa17.41■□□□□ 0.38
COL18A1-205ENST00000423214 FAM213AQ9BRX8 229 aa17.41■□□□□ 0.38
COL18A1-205ENST00000423214 IKZF4Q9H2S9 585 aa17.41■□□□□ 0.38
COL18A1-205ENST00000423214 RBM12Q9NTZ6 932 aaKnown RBP17.41■□□□□ 0.38
COL18A1-205ENST00000423214 THG1LQ9NWX6 298 aaKnown RBP17.41■□□□□ 0.38
COL18A1-205ENST00000423214 GTSE1Q9NYZ3 720 aa17.41■□□□□ 0.38
COL18A1-205ENST00000423214 TBC1D7Q9P0N9 293 aa17.41■□□□□ 0.38
COL18A1-205ENST00000423214 ZMYM5Q9UJ78 669 aa17.41■□□□□ 0.38
COL18A1-205ENST00000423214 FBXO2Q9UK22 296 aaPredicted RBP17.41■□□□□ 0.38
COL18A1-205ENST00000423214 PCDHB5Q9Y5E4 795 aa17.41■□□□□ 0.38
COL18A1-205ENST00000423214 SRPRBQ9Y5M8 271 aaKnown RBP17.41■□□□□ 0.38
COL18A1-205ENST00000423214 MED19A0JLT2 244 aaPredicted RBP17.4■□□□□ 0.38
COL18A1-205ENST00000423214 MYBPHLA2RUH7 354 aa17.4■□□□□ 0.38
COL18A1-205ENST00000423214 PPP1R37O75864 691 aa17.4■□□□□ 0.38
COL18A1-205ENST00000423214 HAPLN1P10915 354 aaPredicted RBP17.4■□□□□ 0.38
COL18A1-205ENST00000423214 IDEP14735 1019 aa17.4■□□□□ 0.38
COL18A1-205ENST00000423214 POLR2BP30876 1174 aaKnown RBP17.4■□□□□ 0.38
COL18A1-205ENST00000423214 AVPR1AP37288 418 aa17.4■□□□□ 0.38
COL18A1-205ENST00000423214 STAT6P42226 847 aa17.4■□□□□ 0.38
COL18A1-205ENST00000423214 TFAMQ00059 246 aaKnown RBP17.4■□□□□ 0.38
COL18A1-205ENST00000423214 CEBPZQ03701 1054 aaKnown RBP17.4■□□□□ 0.38
COL18A1-205ENST00000423214 CUL4AQ13619 759 aa17.4■□□□□ 0.38
COL18A1-205ENST00000423214 ALCAMQ13740 583 aa17.4■□□□□ 0.38
COL18A1-205ENST00000423214 PON2Q15165 354 aa17.4■□□□□ 0.38
COL18A1-205ENST00000423214 PTPAQ15257 358 aa17.4■□□□□ 0.38
COL18A1-205ENST00000423214 LAIR1Q6GTX8 287 aa17.4■□□□□ 0.38
COL18A1-205ENST00000423214 CRELD2Q6UXH1 353 aaPredicted RBP17.4■□□□□ 0.38
COL18A1-205ENST00000423214 Q6ZS52 159 aa17.4■□□□□ 0.38
COL18A1-205ENST00000423214 BRSK2Q8IWQ3 736 aa17.4■□□□□ 0.38
COL18A1-205ENST00000423214 SYCP3Q8IZU3 236 aa17.4■□□□□ 0.38
COL18A1-205ENST00000423214 CELF5Q8N6W0 485 aaKnown RBP17.4■□□□□ 0.38
COL18A1-205ENST00000423214 RBAKQ9NYW8 714 aaPredicted RBP17.4■□□□□ 0.38
COL18A1-205ENST00000423214 SPTBN2O15020 2390 aa17.4■□□□□ 0.38
COL18A1-205ENST00000423214 NCOR2Q9Y618 2525 aa17.39■□□□□ 0.37
COL18A1-205ENST00000423214 MYMKA6NI61 221 aa17.39■□□□□ 0.37
COL18A1-205ENST00000423214 PRR5-ARHGAP8B1AHC4 643 aa17.39■□□□□ 0.37
COL18A1-205ENST00000423214 LDHAP00338 332 aaKnown RBP17.39■□□□□ 0.37
COL18A1-205ENST00000423214 ITGB3P05106 788 aa17.39■□□□□ 0.37
COL18A1-205ENST00000423214 WEE1P30291 646 aa17.39■□□□□ 0.37
COL18A1-205ENST00000423214 ADSSP30520 456 aa17.39■□□□□ 0.37
COL18A1-205ENST00000423214 ARHGAP8P85298 464 aa17.39■□□□□ 0.37
COL18A1-205ENST00000423214 TNK2Q07912 1038 aa17.39■□□□□ 0.37
COL18A1-205ENST00000423214 BFSP1Q12934 665 aa17.39■□□□□ 0.37
COL18A1-205ENST00000423214 GAS6Q14393 721 aa17.39■□□□□ 0.37
COL18A1-205ENST00000423214 ITPRIPL2Q3MIP1 535 aa17.39■□□□□ 0.37
COL18A1-205ENST00000423214 TXNDC11Q6PKC3 985 aa17.39■□□□□ 0.37
COL18A1-205ENST00000423214 CCDC73Q6ZRK6 1079 aa17.39■□□□□ 0.37
COL18A1-205ENST00000423214 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.39■□□□□ 0.37
COL18A1-205ENST00000423214 CACTINQ8WUQ7 758 aaKnown RBP17.39■□□□□ 0.37
COL18A1-205ENST00000423214 CLIC6Q96NY7 704 aa17.39■□□□□ 0.37
COL18A1-205ENST00000423214 SMG9Q9H0W8 520 aaKnown RBP17.39■□□□□ 0.37
COL18A1-205ENST00000423214 IL21Q9HBE4 155 aa17.39■□□□□ 0.37
COL18A1-205ENST00000423214 OLFML3Q9NRN5 406 aa17.39■□□□□ 0.37
COL18A1-205ENST00000423214 FOXD4L1Q9NU39 408 aa17.39■□□□□ 0.37
COL18A1-205ENST00000423214 PCDHB13Q9Y5F0 798 aa17.39■□□□□ 0.37
COL18A1-205ENST00000423214 CHURC1-FNTBB4DL54 471 aa17.38■□□□□ 0.37
COL18A1-205ENST00000423214 HUS1O60921 280 aa17.38■□□□□ 0.37
COL18A1-205ENST00000423214 PRPF40AO75400 957 aaKnown RBP17.38■□□□□ 0.37
COL18A1-205ENST00000423214 TMEM191BP0C7N4 346 aa17.38■□□□□ 0.37
COL18A1-205ENST00000423214 DDX6P26196 483 aaKnown RBP eCLIP17.38■□□□□ 0.37
COL18A1-205ENST00000423214 FNTBP49356 437 aa17.38■□□□□ 0.37
COL18A1-205ENST00000423214 MYL7Q01449 175 aa17.38■□□□□ 0.37
COL18A1-205ENST00000423214 KCNA1Q09470 495 aa17.38■□□□□ 0.37
COL18A1-205ENST00000423214 RESTQ13127 1097 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms