RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 EP400NLQ6ZTU2 488 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 SPATA31D4Q6ZUB0 917 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 TMEM86AQ8N2M4 240 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 EFHBQ8N7U6 833 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 EHBP1Q8NDI1 1231 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 VN1R2Q8NFZ6 395 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 OR10T2Q8NGX3 314 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 SLC22A17Q8WUG5 538 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 KBTBD7Q8WVZ9 684 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 TMEM209Q96SK2 561 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 CDCA3Q99618 268 aaPredicted RBP9.93□□□□□ -0.82
PDGFC-202ENST00000422544 CRACR2AQ9BSW2 395 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 SDCBP2Q9H190 292 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 VPS16Q9H269 839 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 NDST4Q9H3R1 872 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 TSPY26PQ9H489 355 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 DDX43Q9NXZ2 648 aaKnown RBP9.93□□□□□ -0.82
PDGFC-202ENST00000422544 LIMA1Q9UHB6 759 aaKnown RBP9.93□□□□□ -0.82
PDGFC-202ENST00000422544 ARIH1Q9Y4X5 557 aaPredicted RBP9.93□□□□□ -0.82
PDGFC-202ENST00000422544 HCFC2Q9Y5Z7 792 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 SCN1AP35498 2009 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 PLXNA4Q9HCM2 1894 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 PDCD11Q14690 1871 aaKnown RBP9.92□□□□□ -0.82
PDGFC-202ENST00000422544 NCK2O43639 380 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 TACC1O75410 805 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 PDGFRBP09619 1106 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 FAM163BP0C2L3 166 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 WARSP23381 471 aaKnown RBP9.92□□□□□ -0.82
PDGFC-202ENST00000422544 LHX1P48742 406 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 CLCN4P51793 760 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 COPB1P53618 953 aaKnown RBP9.92□□□□□ -0.82
PDGFC-202ENST00000422544 ROR1Q01973 937 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 ADAM15Q13444 863 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 KCNC3Q14003 757 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 LILRA6Q6PI73 481 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 GBP6Q6ZN66 633 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 LRRTM3Q86VH5 581 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 PPFIBP1Q86W92 1011 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 ANKRD20A12PQ8NF67 263 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 OR6B3Q8NGW1 331 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 LMO3Q8TAP4 145 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 FAM200AQ8TCP9 573 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 PGLYRP2Q96PD5 576 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 OXCT2Q9BYC2 517 aaPredicted RBP9.92□□□□□ -0.82
PDGFC-202ENST00000422544 NIF3L1Q9GZT8 377 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 INTS2Q9H0H0 1204 aaKnown RBP9.92□□□□□ -0.82
PDGFC-202ENST00000422544 SNX25Q9H3E2 840 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 CLDND1Q9NY35 253 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 NME7Q9Y5B8 376 aa9.92□□□□□ -0.82
PDGFC-202ENST00000422544 WDR27A2RRH5 827 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 LRRC10BA6NIK2 292 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 A8MXQ7 604 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 GOLGA6L19H0YKK7 550 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 ATP2C2O75185 946 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 GLP2RO95838 553 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 GLUD1P00367 558 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 TPM2P07951 284 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 CPB1P15086 417 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 CD58P19256 250 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 SLC9A1P19634 815 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 APBA1Q02410 837 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 DLX2Q07687 328 aaPredicted RBP9.91□□□□□ -0.82
PDGFC-202ENST00000422544 EXOC3L4Q17RC7 722 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 CTC1Q2NKJ3 1217 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 RNF19BQ6ZMZ0 732 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 RRAGAQ7L523 313 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 APTXQ7Z2E3 356 aaKnown RBP9.91□□□□□ -0.82
PDGFC-202ENST00000422544 RNF214Q8ND24 703 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 ZNF461Q8TAF7 563 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 SPATA18Q8TC71 538 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 PABPC5Q96DU9 382 aaKnown RBP9.91□□□□□ -0.82
PDGFC-202ENST00000422544 NT5C1BQ96P26 610 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 ARID3AQ99856 593 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 ACBD6Q9BR61 282 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 BCO2Q9BYV7 579 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 ZCWPW1Q9H0M4 648 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 CYP3A43Q9HB55 503 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 GCNT4Q9P109 453 aa9.91□□□□□ -0.82
PDGFC-202ENST00000422544 BARX2Q9UMQ3 279 aaPredicted RBP9.91□□□□□ -0.82
PDGFC-202ENST00000422544 TECTAO75443 2155 aa9.9□□□□□ -0.82
PDGFC-202ENST00000422544 MYBPHLA2RUH7 354 aa9.9□□□□□ -0.82
PDGFC-202ENST00000422544 GTPBP10A4D1E9 387 aaKnown RBP9.9□□□□□ -0.82
PDGFC-202ENST00000422544 FAM86C2PA6NEL3 165 aa9.9□□□□□ -0.82
PDGFC-202ENST00000422544 ABLIM3O94929 683 aa9.9□□□□□ -0.82
PDGFC-202ENST00000422544 SEC24AO95486 1093 aa9.9□□□□□ -0.82
PDGFC-202ENST00000422544 PON1P27169 355 aa9.9□□□□□ -0.82
PDGFC-202ENST00000422544 PCSK1P29120 753 aa9.9□□□□□ -0.82
PDGFC-202ENST00000422544 LTBRP36941 435 aa9.9□□□□□ -0.82
PDGFC-202ENST00000422544 NDST1P52848 882 aa9.9□□□□□ -0.82
PDGFC-202ENST00000422544 PSMC1P62191 440 aaKnown RBP9.9□□□□□ -0.82
PDGFC-202ENST00000422544 TPM4P67936 248 aa9.9□□□□□ -0.82
PDGFC-202ENST00000422544 TSPY1Q01534 308 aa9.9□□□□□ -0.82
PDGFC-202ENST00000422544 ADCY1Q08828 1119 aa9.9□□□□□ -0.82
PDGFC-202ENST00000422544 KCNMA1Q12791 1236 aa9.9□□□□□ -0.82
PDGFC-202ENST00000422544 GPR17Q13304 367 aa9.9□□□□□ -0.82
PDGFC-202ENST00000422544 ORC1Q13415 861 aa9.9□□□□□ -0.82
PDGFC-202ENST00000422544 CUL2Q13617 745 aa9.9□□□□□ -0.82
PDGFC-202ENST00000422544 COL19A1Q14993 1142 aa9.9□□□□□ -0.82
PDGFC-202ENST00000422544 CCDC142Q17RM4 750 aa9.9□□□□□ -0.82
PDGFC-202ENST00000422544 SLC39A12Q504Y0 691 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms