RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 CXorf38Q8TB03 319 aa23.54■■□□□ 1.36
TRAF4-204ENST00000422344 MCRS1Q96EZ8 462 aa23.54■■□□□ 1.36
TRAF4-204ENST00000422344 SEPT5Q99719 369 aaPredicted RBP23.54■■□□□ 1.36
TRAF4-204ENST00000422344 GDAP2Q9NXN4 497 aa23.54■■□□□ 1.36
TRAF4-204ENST00000422344 GDE1Q9NZC3 331 aa23.54■■□□□ 1.36
TRAF4-204ENST00000422344 HSFX1Q9UBD0 423 aa23.54■■□□□ 1.36
TRAF4-204ENST00000422344 L1RE1Q9UN81 338 aa23.54■■□□□ 1.36
TRAF4-204ENST00000422344 DOCK8Q8NF50 2099 aa23.54■■□□□ 1.36
TRAF4-204ENST00000422344 EP300Q09472 2414 aaPredicted RBP23.53■■□□□ 1.36
TRAF4-204ENST00000422344 ZNF292O60281 2723 aa23.53■■□□□ 1.36
TRAF4-204ENST00000422344 KRBA1A5PL33 1030 aa23.53■■□□□ 1.36
TRAF4-204ENST00000422344 RHOBTB3O94955 611 aa23.53■■□□□ 1.36
TRAF4-204ENST00000422344 MYL4P12829 197 aa23.53■■□□□ 1.36
TRAF4-204ENST00000422344 TUFMP49411 452 aaKnown RBP23.53■■□□□ 1.36
TRAF4-204ENST00000422344 PARM1Q6UWI2 310 aa23.53■■□□□ 1.36
TRAF4-204ENST00000422344 TRAPPC11Q7Z392 1133 aa23.53■■□□□ 1.36
TRAF4-204ENST00000422344 TOP6BLQ8N6T0 577 aa23.53■■□□□ 1.36
TRAF4-204ENST00000422344 ST13P5Q8NFI4 369 aaPredicted RBP23.53■■□□□ 1.36
TRAF4-204ENST00000422344 C2orf15Q8WU43 125 aaKnown RBP23.53■■□□□ 1.36
TRAF4-204ENST00000422344 CRISPLD1Q9H336 500 aa23.53■■□□□ 1.36
TRAF4-204ENST00000422344 DDX43Q9NXZ2 648 aaKnown RBP23.53■■□□□ 1.36
TRAF4-204ENST00000422344 WNT16Q9UBV4 365 aa23.53■■□□□ 1.36
TRAF4-204ENST00000422344 DOCK6Q96HP0 2047 aa23.52■■□□□ 1.36
TRAF4-204ENST00000422344 PDXKO00764 312 aa23.52■■□□□ 1.36
TRAF4-204ENST00000422344 CALUO43852 315 aaPredicted RBP23.52■■□□□ 1.36
TRAF4-204ENST00000422344 SRFP11831 508 aa23.52■■□□□ 1.36
TRAF4-204ENST00000422344 CEBPBP17676 345 aa23.52■■□□□ 1.36
TRAF4-204ENST00000422344 RFX1P22670 979 aa23.52■■□□□ 1.36
TRAF4-204ENST00000422344 MGAT5BQ3V5L5 792 aa23.52■■□□□ 1.36
TRAF4-204ENST00000422344 PRSS36Q5K4E3 855 aa23.52■■□□□ 1.36
TRAF4-204ENST00000422344 ADGRF2Q8IZF7 708 aa23.52■■□□□ 1.36
TRAF4-204ENST00000422344 HS6ST3Q8IZP7 471 aa23.52■■□□□ 1.36
TRAF4-204ENST00000422344 SPATA18Q8TC71 538 aa23.52■■□□□ 1.36
TRAF4-204ENST00000422344 FAM200AQ8TCP9 573 aa23.52■■□□□ 1.36
TRAF4-204ENST00000422344 SPPL2BQ8TCT7 592 aa23.52■■□□□ 1.36
TRAF4-204ENST00000422344 FGF14Q92915 247 aa23.52■■□□□ 1.36
TRAF4-204ENST00000422344 KCTD10Q9H3F6 313 aa23.52■■□□□ 1.36
TRAF4-204ENST00000422344 CA14Q9ULX7 337 aa23.52■■□□□ 1.36
TRAF4-204ENST00000422344 DCHS1Q96JQ0 3298 aa23.51■■□□□ 1.35
TRAF4-204ENST00000422344 MICAL2O94851 1124 aa23.51■■□□□ 1.35
TRAF4-204ENST00000422344 NR3C1P04150 777 aa23.51■■□□□ 1.35
TRAF4-204ENST00000422344 LHX1P48742 406 aa23.51■■□□□ 1.35
TRAF4-204ENST00000422344 TRPC3Q13507 836 aa23.51■■□□□ 1.35
TRAF4-204ENST00000422344 KCNB1Q14721 858 aa23.51■■□□□ 1.35
TRAF4-204ENST00000422344 VEPH1Q14D04 833 aa23.51■■□□□ 1.35
TRAF4-204ENST00000422344 SCARA3Q6AZY7 606 aa23.51■■□□□ 1.35
TRAF4-204ENST00000422344 ITIH5Q86UX2 942 aa23.51■■□□□ 1.35
TRAF4-204ENST00000422344 SLC9A9Q8IVB4 645 aa23.51■■□□□ 1.35
TRAF4-204ENST00000422344 TCEAL4Q96EI5 215 aa23.51■■□□□ 1.35
TRAF4-204ENST00000422344 ABI2Q9NYB9 513 aaPredicted RBP23.51■■□□□ 1.35
TRAF4-204ENST00000422344 ASB3Q9Y575 518 aa23.51■■□□□ 1.35
TRAF4-204ENST00000422344 PHACTR2O75167 634 aa23.5■■□□□ 1.35
TRAF4-204ENST00000422344 SOAT2O75908 522 aa23.5■■□□□ 1.35
TRAF4-204ENST00000422344 CLSTN1O94985 981 aa23.5■■□□□ 1.35
TRAF4-204ENST00000422344 CDR1P51861 262 aa23.5■■□□□ 1.35
TRAF4-204ENST00000422344 NFE2Q16621 373 aaPredicted RBP23.5■■□□□ 1.35
TRAF4-204ENST00000422344 DPH6Q7L8W6 267 aa23.5■■□□□ 1.35
TRAF4-204ENST00000422344 FMR1NBQ8N0W7 255 aaPredicted RBP23.5■■□□□ 1.35
TRAF4-204ENST00000422344 TTC9BQ8N6N2 239 aa23.5■■□□□ 1.35
TRAF4-204ENST00000422344 ACBD6Q9BR61 282 aa23.5■■□□□ 1.35
TRAF4-204ENST00000422344 FRMD4BQ9Y2L6 1034 aa23.5■■□□□ 1.35
TRAF4-204ENST00000422344 PCDHB5Q9Y5E4 795 aa23.5■■□□□ 1.35
TRAF4-204ENST00000422344 NOTCH4Q99466 2003 aa23.49■■□□□ 1.35
TRAF4-204ENST00000422344 PCSK1P29120 753 aa23.49■■□□□ 1.35
TRAF4-204ENST00000422344 ID4P47928 161 aa23.49■■□□□ 1.35
TRAF4-204ENST00000422344 AP3M2P53677 418 aa23.49■■□□□ 1.35
TRAF4-204ENST00000422344 EPHA5P54756 1037 aa23.49■■□□□ 1.35
TRAF4-204ENST00000422344 FAM160A1Q05DH4 1040 aa23.49■■□□□ 1.35
TRAF4-204ENST00000422344 TAF12Q16514 161 aa23.49■■□□□ 1.35
TRAF4-204ENST00000422344 CEP135Q66GS9 1140 aa23.49■■□□□ 1.35
TRAF4-204ENST00000422344 LRRTM3Q86VH5 581 aa23.49■■□□□ 1.35
TRAF4-204ENST00000422344 MMS19Q96T76 1030 aa23.49■■□□□ 1.35
TRAF4-204ENST00000422344 KXD1Q9BQD3 176 aa23.49■■□□□ 1.35
TRAF4-204ENST00000422344 DNAJC25Q9H1X3 360 aa23.49■■□□□ 1.35
TRAF4-204ENST00000422344 TBC1D17Q9HA65 648 aa23.49■■□□□ 1.35
TRAF4-204ENST00000422344 DMAC2Q9NW81 257 aa23.49■■□□□ 1.35
TRAF4-204ENST00000422344 RMND1Q9NWS8 449 aa23.49■■□□□ 1.35
TRAF4-204ENST00000422344 HOOK1Q9UJC3 728 aaKnown RBP23.49■■□□□ 1.35
TRAF4-204ENST00000422344 MAPK8IP1Q9UQF2 711 aa23.49■■□□□ 1.35
TRAF4-204ENST00000422344 ACAT1P24752 427 aaKnown RBP23.48■■□□□ 1.35
TRAF4-204ENST00000422344 CCR2P41597 374 aa23.48■■□□□ 1.35
TRAF4-204ENST00000422344 TNNC1P63316 161 aa23.48■■□□□ 1.35
TRAF4-204ENST00000422344 BIRC3Q13489 604 aa23.48■■□□□ 1.35
TRAF4-204ENST00000422344 SOWAHAQ2M3V2 549 aa23.48■■□□□ 1.35
TRAF4-204ENST00000422344 INTS6LQ5JSJ4 861 aaKnown RBP23.48■■□□□ 1.35
TRAF4-204ENST00000422344 GPR152Q8TDT2 470 aa23.48■■□□□ 1.35
TRAF4-204ENST00000422344 TMEM174Q8WUU8 243 aa23.48■■□□□ 1.35
TRAF4-204ENST00000422344 PSMG2Q969U7 264 aa23.48■■□□□ 1.35
TRAF4-204ENST00000422344 RPP25Q9BUL9 199 aaKnown RBP23.48■■□□□ 1.35
TRAF4-204ENST00000422344 SLITRK6Q9H5Y7 841 aa23.48■■□□□ 1.35
TRAF4-204ENST00000422344 CIZ1Q9ULV3 898 aaPredicted RBP23.48■■□□□ 1.35
TRAF4-204ENST00000422344 TRAF3IP3Q9Y228 551 aa23.48■■□□□ 1.35
TRAF4-204ENST00000422344 ECI2O75521 394 aa23.47■■□□□ 1.35
TRAF4-204ENST00000422344 FGF19O95750 216 aa23.47■■□□□ 1.35
TRAF4-204ENST00000422344 HAPLN1P10915 354 aaPredicted RBP23.47■■□□□ 1.35
TRAF4-204ENST00000422344 GJA1P17302 382 aa23.47■■□□□ 1.35
TRAF4-204ENST00000422344 CASP4P49662 377 aa23.47■■□□□ 1.35
TRAF4-204ENST00000422344 PNOCQ13519 176 aa23.47■■□□□ 1.35
TRAF4-204ENST00000422344 DNAJB7Q7Z6W7 309 aaPredicted RBP23.47■■□□□ 1.35
TRAF4-204ENST00000422344 OSTM1Q86WC4 334 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms