RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 FAM124BQ9H5Z6 455 aaPredicted RBP13.07□□□□□ -0.32
UFD1-203ENST00000421968 HEMK1Q9Y5R4 338 aaPredicted RBP13.07□□□□□ -0.32
UFD1-203ENST00000421968 USP9YO00507 2555 aaPredicted RBP13.06□□□□□ -0.32
UFD1-203ENST00000421968 K7EQS6 105 aa13.06□□□□□ -0.32
UFD1-203ENST00000421968 SH2B2O14492 632 aaPredicted RBP13.06□□□□□ -0.32
UFD1-203ENST00000421968 PRC1O43663 620 aa13.06□□□□□ -0.32
UFD1-203ENST00000421968 DKC1O60832 514 aaKnown RBP eCLIP13.06□□□□□ -0.32
UFD1-203ENST00000421968 GNSP15586 552 aa13.06□□□□□ -0.32
UFD1-203ENST00000421968 KCNH2Q12809 1159 aa13.06□□□□□ -0.32
UFD1-203ENST00000421968 TMEM132AQ24JP5 1023 aa13.06□□□□□ -0.32
UFD1-203ENST00000421968 PKDCCQ504Y2 493 aa13.06□□□□□ -0.32
UFD1-203ENST00000421968 B3GNT9Q6UX72 402 aa13.06□□□□□ -0.32
UFD1-203ENST00000421968 ZNF574Q6ZN55 896 aaPredicted RBP13.06□□□□□ -0.32
UFD1-203ENST00000421968 SLC41A1Q8IVJ1 513 aa13.06□□□□□ -0.32
UFD1-203ENST00000421968 TXNDC5Q8NBS9 432 aaKnown RBP13.06□□□□□ -0.32
UFD1-203ENST00000421968 BEST2Q8NFU1 509 aa13.06□□□□□ -0.32
UFD1-203ENST00000421968 ASAP3Q8TDY4 903 aa13.06□□□□□ -0.32
UFD1-203ENST00000421968 FGF11Q92914 225 aa13.06□□□□□ -0.32
UFD1-203ENST00000421968 USP13Q92995 863 aaPredicted RBP13.06□□□□□ -0.32
UFD1-203ENST00000421968 IL25Q9H293 177 aa13.06□□□□□ -0.32
UFD1-203ENST00000421968 CRISPLD1Q9H336 500 aa13.06□□□□□ -0.32
UFD1-203ENST00000421968 IL21RQ9HBE5 538 aa13.06□□□□□ -0.32
UFD1-203ENST00000421968 SUSD2Q9UGT4 822 aa13.06□□□□□ -0.32
UFD1-203ENST00000421968 SLC27A5Q9Y2P5 690 aa13.06□□□□□ -0.32
UFD1-203ENST00000421968 NUB1Q9Y5A7 615 aa13.06□□□□□ -0.32
UFD1-203ENST00000421968 PODXLO00592 558 aa13.05□□□□□ -0.32
UFD1-203ENST00000421968 VNN2O95498 520 aa13.05□□□□□ -0.32
UFD1-203ENST00000421968 KLF8O95600 359 aaPredicted RBP13.05□□□□□ -0.32
UFD1-203ENST00000421968 JUPP14923 745 aa13.05□□□□□ -0.32
UFD1-203ENST00000421968 CDC25CP30307 473 aa13.05□□□□□ -0.32
UFD1-203ENST00000421968 MRPS21P82921 87 aaKnown RBP13.05□□□□□ -0.32
UFD1-203ENST00000421968 XKR9Q5GH70 373 aa13.05□□□□□ -0.32
UFD1-203ENST00000421968 ARHGAP40Q5TG30 622 aa13.05□□□□□ -0.32
UFD1-203ENST00000421968 ITIH5Q86UX2 942 aa13.05□□□□□ -0.32
UFD1-203ENST00000421968 TMPRSS12Q86WS5 348 aa13.05□□□□□ -0.32
UFD1-203ENST00000421968 POTEDQ86YR6 584 aa13.05□□□□□ -0.32
UFD1-203ENST00000421968 ALLCQ8N6M5 410 aa13.05□□□□□ -0.32
UFD1-203ENST00000421968 MTA3Q9BTC8 594 aa13.05□□□□□ -0.32
UFD1-203ENST00000421968 NFKBIZQ9BYH8 718 aa13.05□□□□□ -0.32
UFD1-203ENST00000421968 FAM117AQ9C073 453 aa13.05□□□□□ -0.32
UFD1-203ENST00000421968 C6orf50Q9HD87 102 aa13.05□□□□□ -0.32
UFD1-203ENST00000421968 TM7SF3Q9NS93 570 aa13.05□□□□□ -0.32
UFD1-203ENST00000421968 TDP1Q9NUW8 608 aa13.05□□□□□ -0.32
UFD1-203ENST00000421968 MYO18AQ92614 2054 aaKnown RBP13.04□□□□□ -0.32
UFD1-203ENST00000421968 TCRBV21S2A2A0A5A6 115 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 SGK1O00141 431 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 N4BP3O15049 544 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 FLRT2O43155 660 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 TNFSF14O43557 240 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 SOAT2O75908 522 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 OR4Q2P0C623 313 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 ZNF883P0CG24 379 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 SOX4Q06945 474 aaPredicted RBP13.04□□□□□ -0.32
UFD1-203ENST00000421968 SCRN1Q12765 414 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 MYO1EQ12965 1108 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 OTUD6AQ7L8S5 288 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 SGMS1Q86VZ5 419 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 MAB21L3Q8N8X9 362 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 TTC16Q8NEE8 873 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 APPL2Q8NEU8 664 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 RIN3Q8TB24 985 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 TMEM176AQ96HP8 235 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 TMEM87BQ96K49 555 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 ADPGKQ9BRR6 497 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 PDZD7Q9H5P4 517 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 GAREM1Q9H706 876 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 KIF9Q9HAQ2 790 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 XPNPEP1Q9NQW7 623 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 DUS2Q9NX74 493 aaKnown RBP13.04□□□□□ -0.32
UFD1-203ENST00000421968 WRAP73Q9P2S5 460 aaPredicted RBP13.04□□□□□ -0.32
UFD1-203ENST00000421968 ZMYM5Q9UJ78 669 aa13.04□□□□□ -0.32
UFD1-203ENST00000421968 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.04□□□□□ -0.32
UFD1-203ENST00000421968 CCER2I3L3R5 266 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 EML1O00423 815 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 EDIL3O43854 480 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 CILPO75339 1184 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 ATXN8OSP0DMR3 200 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 MARCKSP29966 332 aaPredicted RBP13.03□□□□□ -0.32
UFD1-203ENST00000421968 YWHABP31946 246 aaKnown RBP13.03□□□□□ -0.32
UFD1-203ENST00000421968 TIE1P35590 1138 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 HNF1BP35680 557 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 LIFRP42702 1097 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 USP11P51784 963 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 TMPRSS3P57727 454 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 NR1H3Q13133 447 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 EOGTQ5NDL2 527 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 SYCP2LQ5T4T6 812 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 TTC9Q92623 222 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 DDX12PQ92771 950 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 ATP2A3Q93084 1043 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 PRIMPOLQ96LW4 560 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 LGMNQ99538 433 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 ZMYND12Q9H0C1 365 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 FZD8Q9H461 694 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 CPNE5Q9HCH3 593 aa13.03□□□□□ -0.32
UFD1-203ENST00000421968 PRMT7Q9NVM4 692 aaPredicted RBP13.03□□□□□ -0.32
UFD1-203ENST00000421968 RBM28Q9NW13 759 aaKnown RBP13.03□□□□□ -0.32
UFD1-203ENST00000421968 FNDC3AQ9Y2H6 1198 aaKnown RBP13.03□□□□□ -0.32
UFD1-203ENST00000421968 NBPF19A0A087WUL8 3843 aa13.02□□□□□ -0.33
UFD1-203ENST00000421968 ESYT2A0FGR8 921 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms