RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 SYCP2LQ5T4T6 812 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 CDCA2Q69YH5 1023 aaPredicted RBP11.57□□□□□ -0.56
DDX56-203ENST00000421223 NLRP14Q86W24 1093 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 GLIS1Q8NBF1 620 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 LENG1Q96BZ8 264 aaPredicted RBP11.57□□□□□ -0.56
DDX56-203ENST00000421223 XYLT2Q9H1B5 865 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 RASSF4Q9H2L5 321 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 EPB41L4BQ9H329 900 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 KCNK9Q9NPC2 374 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.57□□□□□ -0.56
DDX56-203ENST00000421223 CTNNAL1Q9UBT7 734 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 DNPEPQ9ULA0 475 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 FAM169AQ9Y6X4 670 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 IGKV6-21A0A0C4DH24 114 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 TMEM191CA6NGB0 347 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 M0QYV0 167 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 ABLIM1O14639 778 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 DYNC1LI2O43237 492 aaPredicted RBP11.57□□□□□ -0.56
DDX56-203ENST00000421223 RIPK2O43353 540 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 RGS7P49802 495 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 AP3M2P53677 418 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 LAMC2Q13753 1193 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 LRRC14Q15048 493 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 SURF1Q15526 300 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 AMHR2Q16671 573 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 P3H1Q32P28 736 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 PTPN20Q4JDL3 420 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 IZUMO3Q5VZ72 239 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 USP50Q70EL3 339 aaPredicted RBP11.57□□□□□ -0.56
DDX56-203ENST00000421223 CPLX4Q7Z7G2 160 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 SESTD1Q86VW0 696 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 HSPH1Q92598 858 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 ART4Q93070 314 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 SNF8Q96H20 258 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 SDCBP2Q9H190 292 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 EPN3Q9H201 632 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 SIX4Q9UIU6 781 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 PNMA3Q9UL41 463 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 BHMG1C9JSJ3 638 aaPredicted RBP11.57□□□□□ -0.56
DDX56-203ENST00000421223 SGK1O00141 431 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 DRG2P55039 364 aaKnown RBP11.57□□□□□ -0.56
DDX56-203ENST00000421223 EIF3BP55884 814 aaKnown RBP11.57□□□□□ -0.56
DDX56-203ENST00000421223 IFT88Q13099 833 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 SLMAPQ14BN4 828 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 CYP1B1Q16678 543 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 C12orf29Q8N999 325 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 ANKRD42Q8N9B4 389 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 ZNF473Q8WTR7 871 aaKnown RBP11.57□□□□□ -0.56
DDX56-203ENST00000421223 MAIP1Q8WWC4 291 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 KIF12Q96FN5 646 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 HPDLQ96IR7 371 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 METTL5Q9NRN9 209 aaKnown RBP11.57□□□□□ -0.56
DDX56-203ENST00000421223 PRMT7Q9NVM4 692 aaPredicted RBP11.57□□□□□ -0.56
DDX56-203ENST00000421223 CYTH4Q9UIA0 394 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 GAS2O43903 313 aaKnown RBP11.56□□□□□ -0.56
DDX56-203ENST00000421223 ZNF252P-AS1Q0IIN9 211 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 EXOC8Q8IYI6 725 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 GRK7Q8WTQ7 553 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 DYDC1Q8WWB3 177 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 CPXM1Q96SM3 734 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 TMEM121Q9BTD3 319 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 CALN1Q9BXU9 219 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 CXCL16Q9H2A7 254 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 TNFSF13BQ9Y275 285 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.56□□□□□ -0.56
DDX56-203ENST00000421223 LCTP09848 1927 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 ARID2Q68CP9 1835 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 PSTPIP1O43586 416 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 KIAA0754O94854 1291 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 RARGP13631 454 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 CHN1P15882 459 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 CORO7P57737 925 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 GPS1Q13098 491 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 SLC10A6Q3KNW5 377 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 TAPT1Q6NXT6 567 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 SCYL2Q6P3W7 929 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 EP400NLQ6ZTU2 488 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 MICALL1Q8N3F8 863 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 C7orf31Q8N865 590 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 MYCBPAPQ8TBZ2 947 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 VCPIP1Q96JH7 1222 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 PTPRHQ9HD43 1115 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 FAM49BQ9NUQ9 324 aa11.56□□□□□ -0.56
DDX56-203ENST00000421223 PIAS1O75925 651 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 MAP3K6O95382 1288 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 CREB1P16220 341 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 SLC26A2P50443 739 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 ARSEP51690 589 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 ZNF132P52740 706 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 TMEM132DQ14C87 1099 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 TAF5Q15542 800 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 AGBL2Q5U5Z8 902 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 OR6B2Q6IFH4 312 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 OR6J1Q8NGC5 347 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 EXD1Q8NHP7 514 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 ADPGKQ9BRR6 497 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 TXLNGYQ9BZA5 131 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 PDZD7Q9H5P4 517 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 GMNCA6NCL1 334 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 ITIH2P19823 946 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms