RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 RFC1P35251 1148 aaPredicted RBP17.09■□□□□ 0.33
CTSB-203ENST00000420692 TTLL4Q14679 1199 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 DCUN1D2Q6PH85 259 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 SPOCD1Q6ZMY3 1216 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 C3orf20Q8ND61 904 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 JOSD2Q8TAC2 188 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 ANKRD36BP1Q96IX9 119 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 JPH2Q9BR39 696 aaPredicted RBP17.09■□□□□ 0.33
CTSB-203ENST00000420692 NFKBIZQ9BYH8 718 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 ROPN1BQ9BZX4 212 aaPredicted RBP17.09■□□□□ 0.33
CTSB-203ENST00000420692 ROPN1Q9HAT0 212 aaPredicted RBP17.09■□□□□ 0.33
CTSB-203ENST00000420692 PLXNA1Q9UIW2 1896 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 A0A087WZ62 844 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 C3orf70A6NLC5 250 aaPredicted RBP17.09■□□□□ 0.33
CTSB-203ENST00000420692 KRT1P04264 644 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 ZSCAN5DPP0CG00 497 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 STAG3L1P0CL83 205 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 ETS1P14921 441 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 FASTKD5Q7L8L6 764 aaKnown RBP17.09■□□□□ 0.33
CTSB-203ENST00000420692 NIPA2Q8N8Q9 360 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 FDXACB1Q9BRP7 624 aaPredicted RBP17.09■□□□□ 0.33
CTSB-203ENST00000420692 SMYD3Q9H7B4 428 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 RPF1Q9H9Y2 349 aaKnown RBP17.09■□□□□ 0.33
CTSB-203ENST00000420692 ERAP1Q9NZ08 941 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 CTNNAL1Q9UBT7 734 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 ZSWIM8A7E2V4 1837 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 ASAP2O43150 1006 aa17.08■□□□□ 0.33
CTSB-203ENST00000420692 LGALS2P05162 132 aa17.08■□□□□ 0.33
CTSB-203ENST00000420692 KRT19P08727 400 aa17.08■□□□□ 0.33
CTSB-203ENST00000420692 CDKN2BP42772 138 aa17.08■□□□□ 0.33
CTSB-203ENST00000420692 LIG3P49916 1009 aa17.08■□□□□ 0.33
CTSB-203ENST00000420692 CAV1Q03135 178 aa17.08■□□□□ 0.33
CTSB-203ENST00000420692 WDR72Q3MJ13 1102 aa17.08■□□□□ 0.33
CTSB-203ENST00000420692 IZUMO3Q5VZ72 239 aa17.08■□□□□ 0.33
CTSB-203ENST00000420692 JADE1Q6IE81 842 aa17.08■□□□□ 0.33
CTSB-203ENST00000420692 HIBCHQ6NVY1 386 aaPredicted RBP17.08■□□□□ 0.33
CTSB-203ENST00000420692 TADA2BQ86TJ2 420 aa17.08■□□□□ 0.33
CTSB-203ENST00000420692 SLC4A11Q8NBS3 891 aa17.08■□□□□ 0.33
CTSB-203ENST00000420692 CPB2Q96IY4 423 aa17.08■□□□□ 0.33
CTSB-203ENST00000420692 SELENOSQ9BQE4 189 aa17.08■□□□□ 0.33
CTSB-203ENST00000420692 ELOVL4Q9GZR5 314 aa17.08■□□□□ 0.33
CTSB-203ENST00000420692 LHX5Q9H2C1 402 aa17.08■□□□□ 0.33
CTSB-203ENST00000420692 PDZD7Q9H5P4 517 aa17.08■□□□□ 0.33
CTSB-203ENST00000420692 GGA2Q9UJY4 613 aa17.08■□□□□ 0.33
CTSB-203ENST00000420692 hCG_1818297A0A087WSY0 165 aa17.08■□□□□ 0.32
CTSB-203ENST00000420692 CETPP11597 493 aa17.08■□□□□ 0.32
CTSB-203ENST00000420692 ATF7P17544 494 aaPredicted RBP17.08■□□□□ 0.32
CTSB-203ENST00000420692 IL1R2P27930 398 aa17.08■□□□□ 0.32
CTSB-203ENST00000420692 PSMC4P43686 418 aa17.08■□□□□ 0.32
CTSB-203ENST00000420692 FAM187BQ17R55 369 aa17.08■□□□□ 0.32
CTSB-203ENST00000420692 SLC10A6Q3KNW5 377 aa17.08■□□□□ 0.32
CTSB-203ENST00000420692 ZNF792Q3KQV3 632 aa17.08■□□□□ 0.32
CTSB-203ENST00000420692 ZNF365Q70YC5 407 aa17.08■□□□□ 0.32
CTSB-203ENST00000420692 IPO4Q8TEX9 1081 aaKnown RBP17.08■□□□□ 0.32
CTSB-203ENST00000420692 RBM41Q96IZ5 413 aaKnown RBP17.08■□□□□ 0.32
CTSB-203ENST00000420692 CPXM1Q96SM3 734 aa17.08■□□□□ 0.32
CTSB-203ENST00000420692 GOLGA8SH3BPF8 625 aa17.07■□□□□ 0.32
CTSB-203ENST00000420692 IL18RAPO95256 599 aa17.07■□□□□ 0.32
CTSB-203ENST00000420692 CD19P15391 556 aa17.07■□□□□ 0.32
CTSB-203ENST00000420692 YBX3P16989 372 aaKnown RBP eCLIP17.07■□□□□ 0.321e-9■■□□□ 12.9
CTSB-203ENST00000420692 LACTBP83111 547 aaPredicted RBP17.07■□□□□ 0.32
CTSB-203ENST00000420692 IFT88Q13099 833 aa17.07■□□□□ 0.32
CTSB-203ENST00000420692 PIGHQ14442 188 aaPredicted RBP17.07■□□□□ 0.32
CTSB-203ENST00000420692 OASLQ15646 514 aaKnown RBP17.07■□□□□ 0.32
CTSB-203ENST00000420692 TMEM132AQ24JP5 1023 aa17.07■□□□□ 0.32
CTSB-203ENST00000420692 ZNF484Q5JVG2 852 aa17.07■□□□□ 0.32
CTSB-203ENST00000420692 LDLRAD1Q5T700 205 aa17.07■□□□□ 0.32
CTSB-203ENST00000420692 C9orf131Q5VYM1 1079 aa17.07■□□□□ 0.32
CTSB-203ENST00000420692 DRICH1Q6PGQ1 229 aaPredicted RBP17.07■□□□□ 0.32
CTSB-203ENST00000420692 CROCCP2Q86T23 111 aa17.07■□□□□ 0.32
CTSB-203ENST00000420692 SPATS2Q86XZ4 545 aaKnown RBP17.07■□□□□ 0.32
CTSB-203ENST00000420692 CYP4X1Q8N118 509 aa17.07■□□□□ 0.32
CTSB-203ENST00000420692 CCDC89Q8N998 374 aa17.07■□□□□ 0.32
CTSB-203ENST00000420692 SHCBP1Q8NEM2 672 aa17.07■□□□□ 0.32
CTSB-203ENST00000420692 SEC16BQ96JE7 1060 aa17.07■□□□□ 0.32
CTSB-203ENST00000420692 PRMT7Q9NVM4 692 aaPredicted RBP17.07■□□□□ 0.32
CTSB-203ENST00000420692 ASB14A6NK59 587 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 SIGLEC16A6NMB1 481 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 VTNP04004 478 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 ITGB3P05106 788 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 PTPN7P35236 360 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 SLC25A11Q02978 314 aaKnown RBP17.06■□□□□ 0.32
CTSB-203ENST00000420692 P3H1Q32P28 736 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 ZNF667Q5HYK9 610 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 IFNLR1Q8IU57 520 aaPredicted RBP17.06■□□□□ 0.32
CTSB-203ENST00000420692 SERPINB12Q96P63 405 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 KATNBL1Q9H079 304 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 TSPYL1Q9H0U9 437 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 ERBB2P04626 1255 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 ZNF286BP0CG31 522 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 ARF4P18085 180 aaPredicted RBP17.06■□□□□ 0.32
CTSB-203ENST00000420692 YWHAEP62258 255 aaKnown RBP17.06■□□□□ 0.32
CTSB-203ENST00000420692 TAP1Q03518 808 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 POU5F1BQ06416 359 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 CNGA2Q16280 664 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 CCDC142Q17RM4 750 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 YTHDF3Q7Z739 585 aaKnown RBP17.06■□□□□ 0.32
CTSB-203ENST00000420692 PACS2Q86VP3 889 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 RELL1Q8IUW5 271 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 ALLCQ8N6M5 410 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms