RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 KLF2Q9Y5W3 355 aaPredicted RBP4.3□□□□□ -1.72
CNGA1-203ENST00000420489 NFASCO94856 1347 aa4.3□□□□□ -1.72
CNGA1-203ENST00000420489 YKT6O15498 198 aa4.3□□□□□ -1.72
CNGA1-203ENST00000420489 MYH1P12882 1939 aa4.3□□□□□ -1.72
CNGA1-203ENST00000420489 ST13P50502 369 aaKnown RBP4.3□□□□□ -1.72
CNGA1-203ENST00000420489 E2F1Q01094 437 aa4.3□□□□□ -1.72
CNGA1-203ENST00000420489 FOXD4Q12950 439 aaPredicted RBP4.3□□□□□ -1.72
CNGA1-203ENST00000420489 SFRP5Q5T4F7 317 aa4.3□□□□□ -1.72
CNGA1-203ENST00000420489 C12orf40Q86WS4 652 aa4.3□□□□□ -1.72
CNGA1-203ENST00000420489 ARID3BQ8IVW6 561 aaPredicted RBP4.3□□□□□ -1.72
CNGA1-203ENST00000420489 TEX11Q8IYF3 940 aa4.3□□□□□ -1.72
CNGA1-203ENST00000420489 TMEM87AQ8NBN3 555 aa4.3□□□□□ -1.72
CNGA1-203ENST00000420489 C14orf79Q96F83 325 aa4.3□□□□□ -1.72
CNGA1-203ENST00000420489 ZNF334Q9HCZ1 680 aaPredicted RBP4.3□□□□□ -1.72
CNGA1-203ENST00000420489 CHD7Q9P2D1 2997 aa4.3□□□□□ -1.72
CNGA1-203ENST00000420489 PARP2Q9UGN5 583 aa4.3□□□□□ -1.72
CNGA1-203ENST00000420489 ADAM30Q9UKF2 790 aa4.3□□□□□ -1.72
CNGA1-203ENST00000420489 RPS6KL1Q9Y6S9 549 aa4.3□□□□□ -1.72
CNGA1-203ENST00000420489 IGF2RP11717 2491 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 DOCK8Q8NF50 2099 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 PCDHGA12O60330 932 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 CST3P01034 146 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-203ENST00000420489 P4HBP07237 508 aaKnown RBP4.29□□□□□ -1.72
CNGA1-203ENST00000420489 ETV3P41162 512 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 LSSP48449 732 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 EPHA5P54756 1037 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 AMPD2Q01433 879 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 BNIP3Q12983 259 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 IKZF1Q13422 519 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 C2orf27AQ580R0 203 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 TTBK2Q6IQ55 1244 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 FBXL19Q6PCT2 694 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 PARM1Q6UWI2 310 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 TMC5Q6UXY8 1006 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 SAMD3Q8N6K7 520 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 DCBLD1Q8N8Z6 715 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 LINC01599Q8WXQ3 324 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 IPO9Q96P70 1041 aaKnown RBP4.29□□□□□ -1.72
CNGA1-203ENST00000420489 APOL5Q9BWW9 433 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 PCED1AQ9H1Q7 454 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 ZBED9Q6R2W3 1325 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 CHADO15335 359 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 CLDN1O95832 211 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 NR1D1P20393 614 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 PTGER3P43115 390 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 TRAPPC10P48553 1259 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 LYSMD4Q5XG99 296 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 RCSD1Q6JBY9 416 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 ARMCX6Q7L4S7 300 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 CLEC14AQ86T13 490 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 FAM160B2Q86V87 743 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 TGIF2LYQ8IUE0 185 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 KIAA1958Q8N8K9 716 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 PIWIL2Q8TC59 973 aaKnown RBP4.29□□□□□ -1.72
CNGA1-203ENST00000420489 ACER1Q8TDN7 264 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 SGF29Q96ES7 293 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 SECISBP2Q96T21 854 aaKnown RBP4.29□□□□□ -1.72
CNGA1-203ENST00000420489 PPP1R16BQ96T49 567 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 MBNL3Q9NUK0 354 aaKnown RBP4.29□□□□□ -1.72
CNGA1-203ENST00000420489 SERPINB13Q9UIV8 391 aa4.29□□□□□ -1.72
CNGA1-203ENST00000420489 MCM3APO60318 1980 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 DNHD1Q96M86 4753 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 UBE4BO95155 1302 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 CCDC195A0A1B0GUA6 201 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 SH3BP5O60239 455 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 RNASE1P07998 156 aaKnown RBP4.28□□□□□ -1.72
CNGA1-203ENST00000420489 IBSPP21815 317 aaPredicted RBP4.28□□□□□ -1.72
CNGA1-203ENST00000420489 ATP8B2P98198 1209 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 ARHGAP1Q07960 439 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 PICALMQ13492 652 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 ARHGAP40Q5TG30 622 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 SLC6A19Q695T7 634 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 OGFOD2Q6N063 350 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 SLC24A5Q71RS6 500 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 WFDC3Q8IUB2 231 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 LINS1Q8NG48 757 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 GRIN3AQ8TCU5 1115 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 SREK1Q8WXA9 508 aaKnown RBP4.28□□□□□ -1.72
CNGA1-203ENST00000420489 FAM168AQ92567 244 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 MRRFQ96E11 262 aaKnown RBP4.28□□□□□ -1.72
CNGA1-203ENST00000420489 PDCD2LQ9BRP1 358 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 TRMT61BQ9BVS5 477 aaKnown RBP4.28□□□□□ -1.72
CNGA1-203ENST00000420489 ATP6V0A4Q9HBG4 840 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 ZMYM5Q9UJ78 669 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 FLT1P17948 1338 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 ARNTLO00327 626 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 PLIN1O60240 522 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 BRINP1O60477 761 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 GJB6O95452 261 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 EFEMP2O95967 443 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 PRDX5P30044 214 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 ALDH5A1P51649 535 aaPredicted RBP4.28□□□□□ -1.72
CNGA1-203ENST00000420489 GABPAQ06546 454 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 CCDC173Q0VFZ6 552 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 KIZQ2M2Z5 673 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 TSNAXIP1Q2TAA8 658 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 PDLIM3Q53GG5 364 aaPredicted RBP4.28□□□□□ -1.72
CNGA1-203ENST00000420489 CCDC81Q6ZN84 652 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 HEATR4Q86WZ0 1026 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms