RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 TMEM209Q96SK2 561 aa22.94■■□□□ 1.26
CPNE1-211ENST00000420363 MKNK1Q9BUB5 465 aa22.94■■□□□ 1.26
CPNE1-211ENST00000420363 VRTNQ9H8Y1 702 aa22.94■■□□□ 1.26
CPNE1-211ENST00000420363 KCNK12Q9HB15 430 aa22.94■■□□□ 1.26
CPNE1-211ENST00000420363 IGSF9Q9P2J2 1179 aa22.94■■□□□ 1.26
CPNE1-211ENST00000420363 DNMT3BQ9UBC3 853 aaKnown RBP22.94■■□□□ 1.26
CPNE1-211ENST00000420363 GABRDO14764 452 aa22.93■■□□□ 1.26
CPNE1-211ENST00000420363 IKBKBO14920 756 aa22.93■■□□□ 1.26
CPNE1-211ENST00000420363 AKAP3O75969 853 aa22.93■■□□□ 1.26
CPNE1-211ENST00000420363 GBP2P32456 591 aaPredicted RBP22.93■■□□□ 1.26
CPNE1-211ENST00000420363 MCCD1P59942 119 aaPredicted RBP22.93■■□□□ 1.26
CPNE1-211ENST00000420363 TSPY1Q01534 308 aa22.93■■□□□ 1.26
CPNE1-211ENST00000420363 SLC39A12Q504Y0 691 aa22.93■■□□□ 1.26
CPNE1-211ENST00000420363 FLCNQ8NFG4 579 aa22.93■■□□□ 1.26
CPNE1-211ENST00000420363 SPPL2BQ8TCT7 592 aa22.93■■□□□ 1.26
CPNE1-211ENST00000420363 SYAP1Q96A49 352 aaPredicted RBP22.93■■□□□ 1.26
CPNE1-211ENST00000420363 PGLYRP2Q96PD5 576 aa22.93■■□□□ 1.26
CPNE1-211ENST00000420363 MYADMQ96S97 322 aa22.93■■□□□ 1.26
CPNE1-211ENST00000420363 ACBD6Q9BR61 282 aa22.93■■□□□ 1.26
CPNE1-211ENST00000420363 FBXL21Q9UKT6 434 aa22.93■■□□□ 1.26
CPNE1-211ENST00000420363 USP34Q70CQ2 3546 aa22.92■■□□□ 1.26
CPNE1-211ENST00000420363 ZFHX2Q9C0A1 2572 aaPredicted RBP22.92■■□□□ 1.26
CPNE1-211ENST00000420363 RHOP08100 348 aa22.92■■□□□ 1.26
CPNE1-211ENST00000420363 FAM163BP0C2L3 166 aa22.92■■□□□ 1.26
CPNE1-211ENST00000420363 PTPN2P17706 415 aa22.92■■□□□ 1.26
CPNE1-211ENST00000420363 PCSK1P29120 753 aa22.92■■□□□ 1.26
CPNE1-211ENST00000420363 PSMC2P35998 433 aaKnown RBP22.92■■□□□ 1.26
CPNE1-211ENST00000420363 LRRC63Q05C16 580 aa22.92■■□□□ 1.26
CPNE1-211ENST00000420363 TWF1Q12792 350 aa22.92■■□□□ 1.26
CPNE1-211ENST00000420363 ADAM9Q13443 819 aa22.92■■□□□ 1.26
CPNE1-211ENST00000420363 TRPC3Q13507 836 aa22.92■■□□□ 1.26
CPNE1-211ENST00000420363 STIM1Q13586 685 aa22.92■■□□□ 1.26
CPNE1-211ENST00000420363 NFE2Q16621 373 aaPredicted RBP22.92■■□□□ 1.26
CPNE1-211ENST00000420363 SOWAHAQ2M3V2 549 aa22.92■■□□□ 1.26
CPNE1-211ENST00000420363 TDRD10Q5VZ19 366 aaKnown RBP22.92■■□□□ 1.26
CPNE1-211ENST00000420363 ZC3H3Q8IXZ2 948 aaKnown RBP22.92■■□□□ 1.26
CPNE1-211ENST00000420363 ADSSL1Q8N142 457 aa22.92■■□□□ 1.26
CPNE1-211ENST00000420363 ERCC4Q92889 916 aaPredicted RBP22.92■■□□□ 1.26
CPNE1-211ENST00000420363 NXPE3Q969Y0 559 aa22.92■■□□□ 1.26
CPNE1-211ENST00000420363 TSG101Q99816 390 aa22.92■■□□□ 1.26
CPNE1-211ENST00000420363 XYLT2Q9H1B5 865 aa22.92■■□□□ 1.26
CPNE1-211ENST00000420363 CRISPLD1Q9H336 500 aa22.92■■□□□ 1.26
CPNE1-211ENST00000420363 HCFC1R1Q9NWW0 138 aa22.92■■□□□ 1.26
CPNE1-211ENST00000420363 DDX43Q9NXZ2 648 aaKnown RBP22.92■■□□□ 1.26
CPNE1-211ENST00000420363 MICAL2O94851 1124 aa22.91■■□□□ 1.26
CPNE1-211ENST00000420363 CST3P01034 146 aaPredicted RBP22.91■■□□□ 1.26
CPNE1-211ENST00000420363 C4BPAP04003 597 aaKnown RBP22.91■■□□□ 1.26
CPNE1-211ENST00000420363 LAMP2P13473 410 aa22.91■■□□□ 1.26
CPNE1-211ENST00000420363 EPHA5P54756 1037 aa22.91■■□□□ 1.26
CPNE1-211ENST00000420363 NTHL1P78549 312 aa22.91■■□□□ 1.26
CPNE1-211ENST00000420363 DUSP4Q13115 394 aa22.91■■□□□ 1.26
CPNE1-211ENST00000420363 BIRC3Q13489 604 aa22.91■■□□□ 1.26
CPNE1-211ENST00000420363 ZACNQ401N2 412 aa22.91■■□□□ 1.26
CPNE1-211ENST00000420363 INTS6LQ5JSJ4 861 aaKnown RBP22.91■■□□□ 1.26
CPNE1-211ENST00000420363 IQCEQ6IPM2 695 aa22.91■■□□□ 1.26
CPNE1-211ENST00000420363 FAM186BQ8IYM0 893 aa22.91■■□□□ 1.26
CPNE1-211ENST00000420363 ATAD1Q8NBU5 361 aa22.91■■□□□ 1.26
CPNE1-211ENST00000420363 KBTBD7Q8WVZ9 684 aa22.91■■□□□ 1.26
CPNE1-211ENST00000420363 MAN1B1Q9UKM7 699 aa22.91■■□□□ 1.26
CPNE1-211ENST00000420363 CDH7Q9ULB5 785 aa22.91■■□□□ 1.26
CPNE1-211ENST00000420363 ASB3Q9Y575 518 aa22.91■■□□□ 1.26
CPNE1-211ENST00000420363 CETN3O15182 167 aa22.9■■□□□ 1.26
CPNE1-211ENST00000420363 PHACTR2O75167 634 aa22.9■■□□□ 1.26
CPNE1-211ENST00000420363 TACC1O75410 805 aa22.9■■□□□ 1.26
CPNE1-211ENST00000420363 KRT13P13646 458 aa22.9■■□□□ 1.26
CPNE1-211ENST00000420363 WARSP23381 471 aaKnown RBP22.9■■□□□ 1.26
CPNE1-211ENST00000420363 ALDH1A3P47895 512 aa22.9■■□□□ 1.26
CPNE1-211ENST00000420363 TUFMP49411 452 aaKnown RBP22.9■■□□□ 1.26
CPNE1-211ENST00000420363 VAMP7P51809 220 aa22.9■■□□□ 1.26
CPNE1-211ENST00000420363 DLG4P78352 724 aa22.9■■□□□ 1.26
CPNE1-211ENST00000420363 PRSS36Q5K4E3 855 aa22.9■■□□□ 1.26
CPNE1-211ENST00000420363 FOXR2Q6PJQ5 311 aa22.9■■□□□ 1.26
CPNE1-211ENST00000420363 OSTM1Q86WC4 334 aa22.9■■□□□ 1.26
CPNE1-211ENST00000420363 ZNF512Q96ME7 567 aaPredicted RBP22.9■■□□□ 1.26
CPNE1-211ENST00000420363 PKMYT1Q99640 499 aa22.9■■□□□ 1.26
CPNE1-211ENST00000420363 ABCB6Q9NP58 842 aa22.9■■□□□ 1.26
CPNE1-211ENST00000420363 CEP72Q9P209 647 aa22.9■■□□□ 1.26
CPNE1-211ENST00000420363 DUSP12Q9UNI6 340 aa22.9■■□□□ 1.26
CPNE1-211ENST00000420363 PSMA7O14818 248 aa22.89■■□□□ 1.25
CPNE1-211ENST00000420363 SLC16A3O15427 465 aaKnown RBP22.89■■□□□ 1.25
CPNE1-211ENST00000420363 EPHB3P54753 998 aa22.89■■□□□ 1.25
CPNE1-211ENST00000420363 MYL6P60660 151 aa22.89■■□□□ 1.25
CPNE1-211ENST00000420363 TNNC1P63316 161 aa22.89■■□□□ 1.25
CPNE1-211ENST00000420363 NCOA4Q13772 614 aa22.89■■□□□ 1.25
CPNE1-211ENST00000420363 WDR72Q3MJ13 1102 aa22.89■■□□□ 1.25
CPNE1-211ENST00000420363 C1orf220Q5T0J3 134 aa22.89■■□□□ 1.25
CPNE1-211ENST00000420363 LRRTM3Q86VH5 581 aa22.89■■□□□ 1.25
CPNE1-211ENST00000420363 FGF13Q92913 245 aa22.89■■□□□ 1.25
CPNE1-211ENST00000420363 DHTKD1Q96HY7 919 aaPredicted RBP22.89■■□□□ 1.25
CPNE1-211ENST00000420363 DNAJC25Q9H1X3 360 aa22.89■■□□□ 1.25
CPNE1-211ENST00000420363 ASAH2Q9NR71 780 aa22.89■■□□□ 1.25
CPNE1-211ENST00000420363 MRPS23Q9Y3D9 190 aaKnown RBP22.89■■□□□ 1.25
CPNE1-211ENST00000420363 PCDHB5Q9Y5E4 795 aa22.89■■□□□ 1.25
CPNE1-211ENST00000420363 PROB1E7EW31 1015 aa22.88■■□□□ 1.25
CPNE1-211ENST00000420363 ZNF197O14709 1029 aa22.88■■□□□ 1.25
CPNE1-211ENST00000420363 EPB41P11171 864 aaKnown RBP22.88■■□□□ 1.25
CPNE1-211ENST00000420363 FKBP3Q00688 224 aaKnown RBP22.88■■□□□ 1.25
CPNE1-211ENST00000420363 MORC3Q14149 939 aa22.88■■□□□ 1.25
CPNE1-211ENST00000420363 SLC5A9Q2M3M2 681 aa22.88■■□□□ 1.25
CPNE1-211ENST00000420363 ZNF699Q32M78 642 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms