RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 LRRC52Q8N7C0 313 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 OR5B17Q8NGF7 314 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 ZSCAN18Q8TBC5 510 aaPredicted RBP11.9□□□□□ -0.5
SSBP3-206ENST00000420121 KCNG4Q8TDN1 519 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 SCFD1Q8WVM8 642 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 SMARCD2Q92925 531 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 ZNF560Q96MR9 790 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 PKMYT1Q99640 499 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 LPIN3Q9BQK8 851 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 MTMR12Q9C0I1 747 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 LRRC27Q9C0I9 530 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 GZF1Q9H116 711 aaPredicted RBP11.9□□□□□ -0.5
SSBP3-206ENST00000420121 IL21Q9HBE4 155 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 ZFP14Q9HCL3 533 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 LTB4R2Q9NPC1 389 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 HEBP1Q9NRV9 189 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 AGAP1Q9UPQ3 857 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 SPTBN4Q9H254 2564 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 PRR23AA6NEV1 266 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 KIAA0391O15091 583 aaKnown RBP11.89□□□□□ -0.51
SSBP3-206ENST00000420121 HCRTO43612 131 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 KLRC4O43908 158 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 GFRA3O60609 400 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 HAPLN1P10915 354 aaPredicted RBP11.89□□□□□ -0.51
SSBP3-206ENST00000420121 TARSP26639 723 aaKnown RBP11.89□□□□□ -0.51
SSBP3-206ENST00000420121 PNPLA4P41247 253 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 ALDH1A3P47895 512 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 EPHB3P54753 998 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 CUL4BQ13620 913 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 ATL3Q6DD88 541 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 GRAMD1CQ8IYS0 662 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 DNASE1L2Q92874 299 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 SHDQ96IW2 340 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 LRRC3BQ96PB8 259 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 OSBPL6Q9BZF3 934 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 BLZF1Q9H2G9 400 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 MAGEF1Q9HAY2 307 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 AGPAT3Q9NRZ7 376 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 INTS13Q9NVM9 706 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 GDAP2Q9NXN4 497 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 HSPBP1Q9NZL4 362 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 ITGA11Q9UKX5 1188 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 ASB3Q9Y575 518 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 GTF3C3Q9Y5Q9 886 aa11.89□□□□□ -0.51
SSBP3-206ENST00000420121 HELZP42694 1942 aaKnown RBP11.89□□□□□ -0.51
SSBP3-206ENST00000420121 GABRDO14764 452 aa11.88□□□□□ -0.51
SSBP3-206ENST00000420121 ACTN4O43707 911 aaKnown RBP11.88□□□□□ -0.51
SSBP3-206ENST00000420121 HSP90AA1P07900 732 aaKnown RBP11.88□□□□□ -0.51
SSBP3-206ENST00000420121 CD44P16070 742 aaKnown RBP11.88□□□□□ -0.51
SSBP3-206ENST00000420121 HMGA1P17096 107 aaKnown RBP11.88□□□□□ -0.51
SSBP3-206ENST00000420121 PSMC3P17980 439 aa11.88□□□□□ -0.51
SSBP3-206ENST00000420121 GABRR2P28476 465 aa11.88□□□□□ -0.51
SSBP3-206ENST00000420121 ME1P48163 572 aa11.88□□□□□ -0.51
SSBP3-206ENST00000420121 AMPD3Q01432 767 aa11.88□□□□□ -0.51
SSBP3-206ENST00000420121 BMT2Q1RMZ1 405 aa11.88□□□□□ -0.51
SSBP3-206ENST00000420121 TPRG1Q6ZUI0 275 aa11.88□□□□□ -0.51
SSBP3-206ENST00000420121 STXBP4Q6ZWJ1 553 aa11.88□□□□□ -0.51
SSBP3-206ENST00000420121 TMEM150AQ86TG1 271 aa11.88□□□□□ -0.51
SSBP3-206ENST00000420121 METTL23Q86XA0 190 aa11.88□□□□□ -0.51
SSBP3-206ENST00000420121 C1orf210Q8IVY1 113 aa11.88□□□□□ -0.51
SSBP3-206ENST00000420121 MFSD6LQ8IWD5 586 aa11.88□□□□□ -0.51
SSBP3-206ENST00000420121 THEM5Q8N1Q8 247 aa11.88□□□□□ -0.51
SSBP3-206ENST00000420121 CSGALNACT2Q8N6G5 542 aa11.88□□□□□ -0.51
SSBP3-206ENST00000420121 SPPL2BQ8TCT7 592 aa11.88□□□□□ -0.51
SSBP3-206ENST00000420121 C2orf15Q8WU43 125 aaKnown RBP11.88□□□□□ -0.51
SSBP3-206ENST00000420121 CACTINQ8WUQ7 758 aaKnown RBP11.88□□□□□ -0.51
SSBP3-206ENST00000420121 CLDN23Q96B33 292 aa11.88□□□□□ -0.51
SSBP3-206ENST00000420121 SEPT5Q99719 369 aaPredicted RBP11.88□□□□□ -0.51
SSBP3-206ENST00000420121 TRMT61BQ9BVS5 477 aaKnown RBP11.88□□□□□ -0.51
SSBP3-206ENST00000420121 GPR88Q9GZN0 384 aa11.88□□□□□ -0.51
SSBP3-206ENST00000420121 TRPV5Q9NQA5 729 aa11.88□□□□□ -0.51
SSBP3-206ENST00000420121 PTPRZ1P23471 2315 aaPredicted RBP11.88□□□□□ -0.51
SSBP3-206ENST00000420121 OTOGLQ3ZCN5 2332 aa11.88□□□□□ -0.51
SSBP3-206ENST00000420121 UBE4BO95155 1302 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 EP300Q09472 2414 aaPredicted RBP11.87□□□□□ -0.51
SSBP3-206ENST00000420121 PVALEFA0A1B0GWK0 134 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 ZNF233A6NK53 670 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 FAM170BA6NMN3 283 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 HEPACAM2A8MVW5 462 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 CLIC2O15247 247 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 PRAMEF12O95522 483 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 TMEM191BP0C7N4 346 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 RFX1P22670 979 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 GDI1P31150 447 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 AFMP43652 599 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 TUFMP49411 452 aaKnown RBP11.87□□□□□ -0.51
SSBP3-206ENST00000420121 GPR15P49685 360 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 RBP5P82980 135 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 CYP4F8P98187 520 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 FCHO2Q0JRZ9 810 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 SMARCB1Q12824 385 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 BFSP1Q12934 665 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 UBXN2BQ14CS0 331 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 SOWAHAQ2M3V2 549 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 MGAT5BQ3V5L5 792 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 INTS6LQ5JSJ4 861 aaKnown RBP11.87□□□□□ -0.51
SSBP3-206ENST00000420121 GPIHBP1Q8IV16 184 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 ARID3BQ8IVW6 561 aaPredicted RBP11.87□□□□□ -0.51
SSBP3-206ENST00000420121 NELFCDQ8IXH7 590 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 TMEM86AQ8N2M4 240 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms