RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 IDEP14735 1019 aa18.65■□□□□ 0.58
PTCD1-202ENST00000419981 ATF6P18850 670 aa18.65■□□□□ 0.58
PTCD1-202ENST00000419981 SYT1P21579 422 aa18.65■□□□□ 0.58
PTCD1-202ENST00000419981 CDC25CP30307 473 aa18.65■□□□□ 0.58
PTCD1-202ENST00000419981 CCR3P51677 355 aa18.65■□□□□ 0.58
PTCD1-202ENST00000419981 CDR1P51861 262 aa18.65■□□□□ 0.58
PTCD1-202ENST00000419981 NRLP54845 237 aa18.65■□□□□ 0.58
PTCD1-202ENST00000419981 KCNA1Q09470 495 aa18.65■□□□□ 0.58
PTCD1-202ENST00000419981 TAF12Q16514 161 aa18.65■□□□□ 0.58
PTCD1-202ENST00000419981 ARHGAP29Q52LW3 1261 aa18.65■□□□□ 0.58
PTCD1-202ENST00000419981 FAM173BQ6P4H8 233 aa18.65■□□□□ 0.58
PTCD1-202ENST00000419981 MAMSTRQ6ZN01 415 aa18.65■□□□□ 0.58
PTCD1-202ENST00000419981 CCDC73Q6ZRK6 1079 aa18.65■□□□□ 0.58
PTCD1-202ENST00000419981 DCP1BQ8IZD4 617 aaKnown RBP18.65■□□□□ 0.58
PTCD1-202ENST00000419981 SECISBP2LQ93073 1101 aaKnown RBP18.65■□□□□ 0.58
PTCD1-202ENST00000419981 FAM213AQ9BRX8 229 aa18.65■□□□□ 0.58
PTCD1-202ENST00000419981 OLFML3Q9NRN5 406 aa18.65■□□□□ 0.58
PTCD1-202ENST00000419981 ABI2Q9NYB9 513 aaPredicted RBP18.65■□□□□ 0.58
PTCD1-202ENST00000419981 LDHAP00338 332 aaKnown RBP18.64■□□□□ 0.57
PTCD1-202ENST00000419981 CHRNB1P11230 501 aa18.64■□□□□ 0.57
PTCD1-202ENST00000419981 TDGF1P13385 188 aa18.64■□□□□ 0.57
PTCD1-202ENST00000419981 PNPLA4P41247 253 aa18.64■□□□□ 0.57
PTCD1-202ENST00000419981 STAT6P42226 847 aa18.64■□□□□ 0.57
PTCD1-202ENST00000419981 CYP4F8P98187 520 aa18.64■□□□□ 0.57
PTCD1-202ENST00000419981 TFAMQ00059 246 aaKnown RBP18.64■□□□□ 0.57
PTCD1-202ENST00000419981 ALCAMQ13740 583 aa18.64■□□□□ 0.57
PTCD1-202ENST00000419981 LRRC32Q14392 662 aa18.64■□□□□ 0.57
PTCD1-202ENST00000419981 LRRTM3Q86VH5 581 aa18.64■□□□□ 0.57
PTCD1-202ENST00000419981 BRSK2Q8IWQ3 736 aa18.64■□□□□ 0.57
PTCD1-202ENST00000419981 SYCP3Q8IZU3 236 aa18.64■□□□□ 0.57
PTCD1-202ENST00000419981 SAAL1Q96ER3 474 aa18.64■□□□□ 0.57
PTCD1-202ENST00000419981 TASP1Q9H6P5 420 aa18.64■□□□□ 0.57
PTCD1-202ENST00000419981 PCDHB13Q9Y5F0 798 aa18.64■□□□□ 0.57
PTCD1-202ENST00000419981 SPECC1L-ADORA2AF8WAN1 911 aa18.63■□□□□ 0.57
PTCD1-202ENST00000419981 PRAMEF12O95522 483 aa18.63■□□□□ 0.57
PTCD1-202ENST00000419981 HAPLN1P10915 354 aaPredicted RBP18.63■□□□□ 0.57
PTCD1-202ENST00000419981 GARTP22102 1010 aa18.63■□□□□ 0.57
PTCD1-202ENST00000419981 WEE1P30291 646 aa18.63■□□□□ 0.57
PTCD1-202ENST00000419981 POLR2BP30876 1174 aaKnown RBP18.63■□□□□ 0.57
PTCD1-202ENST00000419981 SOX9P48436 509 aa18.63■□□□□ 0.57
PTCD1-202ENST00000419981 CASP5P51878 434 aa18.63■□□□□ 0.57
PTCD1-202ENST00000419981 WNT7BP56706 349 aa18.63■□□□□ 0.57
PTCD1-202ENST00000419981 TSPY1Q01534 308 aa18.63■□□□□ 0.57
PTCD1-202ENST00000419981 BPIFB1Q8TDL5 484 aa18.63■□□□□ 0.57
PTCD1-202ENST00000419981 GIPC2Q8TF65 315 aa18.63■□□□□ 0.57
PTCD1-202ENST00000419981 ZFYVE19Q96K21 471 aa18.63■□□□□ 0.57
PTCD1-202ENST00000419981 IL21Q9HBE4 155 aa18.63■□□□□ 0.57
PTCD1-202ENST00000419981 RBAKQ9NYW8 714 aaPredicted RBP18.63■□□□□ 0.57
PTCD1-202ENST00000419981 ZMYM5Q9UJ78 669 aa18.63■□□□□ 0.57
PTCD1-202ENST00000419981 PCDHB5Q9Y5E4 795 aa18.63■□□□□ 0.57
PTCD1-202ENST00000419981 FRMD3A2A2Y4 597 aa18.62■□□□□ 0.57
PTCD1-202ENST00000419981 MYBPHLA2RUH7 354 aa18.62■□□□□ 0.57
PTCD1-202ENST00000419981 ITGB3P05106 788 aa18.62■□□□□ 0.57
PTCD1-202ENST00000419981 CTHP32929 405 aa18.62■□□□□ 0.57
PTCD1-202ENST00000419981 PLCB2Q00722 1185 aa18.62■□□□□ 0.57
PTCD1-202ENST00000419981 PUM1Q14671 1186 aaKnown RBP eCLIP18.62■□□□□ 0.57
PTCD1-202ENST00000419981 DGLUCYQ7Z3D6 616 aa18.62■□□□□ 0.57
PTCD1-202ENST00000419981 RALGPS2Q86X27 583 aaPredicted RBP18.62■□□□□ 0.57
PTCD1-202ENST00000419981 GPR161Q8N6U8 529 aaKnown RBP18.62■□□□□ 0.57
PTCD1-202ENST00000419981 ZSWIM2Q8NEG5 633 aa18.62■□□□□ 0.57
PTCD1-202ENST00000419981 CACTINQ8WUQ7 758 aaKnown RBP18.62■□□□□ 0.57
PTCD1-202ENST00000419981 LRRC3BQ96PB8 259 aa18.62■□□□□ 0.57
PTCD1-202ENST00000419981 USP28Q96RU2 1077 aa18.62■□□□□ 0.57
PTCD1-202ENST00000419981 PANK4Q9NVE7 773 aa18.62■□□□□ 0.57
PTCD1-202ENST00000419981 GTSE1Q9NYZ3 720 aa18.62■□□□□ 0.57
PTCD1-202ENST00000419981 AGAP1Q9UPQ3 857 aa18.62■□□□□ 0.57
PTCD1-202ENST00000419981 MORC2Q9Y6X9 1032 aaPredicted RBP18.62■□□□□ 0.57
PTCD1-202ENST00000419981 CEP250Q9BV73 2442 aa18.61■□□□□ 0.57
PTCD1-202ENST00000419981 A0A087X0B3 334 aa18.61■□□□□ 0.57
PTCD1-202ENST00000419981 CXCL12P48061 93 aa18.61■□□□□ 0.57
PTCD1-202ENST00000419981 SATB1Q01826 763 aa18.61■□□□□ 0.57
PTCD1-202ENST00000419981 SLC39A14Q15043 492 aa18.61■□□□□ 0.57
PTCD1-202ENST00000419981 TXNDC11Q6PKC3 985 aa18.61■□□□□ 0.57
PTCD1-202ENST00000419981 SPEM1Q8N4L4 309 aa18.61■□□□□ 0.57
PTCD1-202ENST00000419981 C1orf127Q8N9H9 656 aa18.61■□□□□ 0.57
PTCD1-202ENST00000419981 TTC8Q8TAM2 541 aa18.61■□□□□ 0.57
PTCD1-202ENST00000419981 NOC3LQ8WTT2 800 aaKnown RBP18.61■□□□□ 0.57
PTCD1-202ENST00000419981 INTS4Q96HW7 963 aaKnown RBP18.61■□□□□ 0.57
PTCD1-202ENST00000419981 PANK2Q9BZ23 570 aa18.61■□□□□ 0.57
PTCD1-202ENST00000419981 RBM12Q9NTZ6 932 aaKnown RBP18.61■□□□□ 0.57
PTCD1-202ENST00000419981 THG1LQ9NWX6 298 aaKnown RBP18.61■□□□□ 0.57
PTCD1-202ENST00000419981 GMEB2Q9UKD1 530 aa18.61■□□□□ 0.57
PTCD1-202ENST00000419981 ITGA11Q9UKX5 1188 aa18.61■□□□□ 0.57
PTCD1-202ENST00000419981 RAB23Q9ULC3 237 aa18.61■□□□□ 0.57
PTCD1-202ENST00000419981 CACNA1AO00555 2505 aa18.6■□□□□ 0.57
PTCD1-202ENST00000419981 GOLGA8IPA6NC78 632 aa18.6■□□□□ 0.57
PTCD1-202ENST00000419981 GOLGA8JA6NMD2 632 aa18.6■□□□□ 0.57
PTCD1-202ENST00000419981 EXTL3O43909 919 aa18.6■□□□□ 0.57
PTCD1-202ENST00000419981 HUS1O60921 280 aa18.6■□□□□ 0.57
PTCD1-202ENST00000419981 BFSP1Q12934 665 aa18.6■□□□□ 0.57
PTCD1-202ENST00000419981 GAS6Q14393 721 aa18.6■□□□□ 0.57
PTCD1-202ENST00000419981 NFE2Q16621 373 aaPredicted RBP18.6■□□□□ 0.57
PTCD1-202ENST00000419981 DGKKQ5KSL6 1271 aa18.6■□□□□ 0.57
PTCD1-202ENST00000419981 CCDC65Q8IXS2 484 aa18.6■□□□□ 0.57
PTCD1-202ENST00000419981 CMTM8Q8IZV2 173 aa18.6■□□□□ 0.57
PTCD1-202ENST00000419981 PDCL2Q8N4E4 241 aa18.6■□□□□ 0.57
PTCD1-202ENST00000419981 CELF5Q8N6W0 485 aaKnown RBP18.6■□□□□ 0.57
PTCD1-202ENST00000419981 LRRC52Q8N7C0 313 aa18.6■□□□□ 0.57
PTCD1-202ENST00000419981 PDILTQ8N807 584 aa18.6■□□□□ 0.57
PTCD1-202ENST00000419981 LEO1Q8WVC0 666 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms