RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 MOGSQ13724 837 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 CYP4A22Q5TCH4 519 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 FYB2Q5VWT5 728 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 C15orf39Q6ZRI6 1047 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 CCDC125Q86Z20 511 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 RELL1Q8IUW5 271 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 OR5B17Q8NGF7 314 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 ZNF606Q8WXB4 792 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 ZNF75CPQ92670 426 aaPredicted RBP15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 FAXDC2Q96IV6 333 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 MSTO1Q9BUK6 570 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 TARS2Q9BW92 718 aaKnown RBP15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 PSMC3IPQ9P2W1 217 aaPredicted RBP15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 PRPF4O43172 522 aaKnown RBP eCLIP15.98■□□□□ 0.152e-6■■□□□ 14
SEMA3B-203ENST00000419007 FGFR1P11362 822 aa15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 PSMD6Q15008 389 aa15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 KCNT1Q5JUK3 1230 aa15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 CAPRIN2Q6IMN6 1127 aaKnown RBP15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 NLRP9Q7RTR0 991 aa15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 RHPN2Q8IUC4 686 aa15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 CCDC60Q8IWA6 550 aaPredicted RBP15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 LARGE2Q8N3Y3 721 aa15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 TTC8Q8TAM2 541 aa15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 FOXP3Q9BZS1 431 aa15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 DEFB129Q9H1M3 183 aa15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 RNPEPL1Q9HAU8 725 aa15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 SLC38A10Q9HBR0 1119 aa15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 CYP26B1Q9NR63 512 aa15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 ZNF541Q9H0D2 1346 aa15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 NR3C2P08235 984 aa15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 MORF4L2Q15014 288 aa15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 SPDYE2Q495Y8 402 aa15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 NAF1Q96HR8 494 aaKnown RBP15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 IMPG2Q9BZV3 1241 aa15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 C17orf75Q9HAS0 396 aa15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 RIPK3Q9Y572 518 aa15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 TNS1Q9HBL0 1735 aaKnown RBP15.98■□□□□ 0.15
SEMA3B-203ENST00000419007 K7ERI5 159 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 PDHA1P08559 390 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 GM2AP17900 193 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 RASSF2P50749 326 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 VCPP55072 806 aaKnown RBP15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 WDR72Q3MJ13 1102 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 BBS9Q3SYG4 887 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 C3orf62Q6ZUJ4 267 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 PHF13Q86YI8 300 aaPredicted RBP15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 CNKSR1Q969H4 720 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 COL11A2P13942 1736 aaPredicted RBP15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 WDR46O15213 610 aaKnown RBP15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 T-ENOLP0DO92 83 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 CALB2P22676 271 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 C1QBPQ07021 282 aaKnown RBP15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 NCOA4Q13772 614 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 MAPK6Q16659 721 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 SCARA5Q6ZMJ2 495 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 DEPTORQ8TB45 409 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 WNK4Q96J92 1243 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 TCHPQ9BT92 498 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 RNF146Q9NTX7 359 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 SENP1Q9P0U3 644 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 PSAPP07602 524 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 CTCFP49711 727 aaPredicted RBP15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 GEMIN4P57678 1058 aaKnown RBP15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 OGDHQ02218 1023 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 ZBTB16Q05516 673 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 RNASEH2BQ5TBB1 312 aaKnown RBP15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 PALM2Q8IXS6 379 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 C10orf82Q8WW14 230 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 SLC7A6OSQ96CW6 309 aaPredicted RBP15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 FBXO40Q9UH90 709 aa15.97■□□□□ 0.15
SEMA3B-203ENST00000419007 CFAP69A5D8W1 941 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 TMEM191CA6NGB0 347 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 ALOX15BO15296 676 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 MAGEB2O15479 319 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 PEX11AO75192 247 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 TMEM191BP0C7N4 346 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 TROVE2P10155 538 aaKnown RBP eCLIP15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 GLRA2P23416 452 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 ZNF252P-AS1Q0IIN9 211 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 PARP6Q2NL67 630 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 TFDP3Q5H9I0 405 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 ANKRD22Q5VYY1 191 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 STYK1Q6J9G0 422 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 VCPIP1Q96JH7 1222 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 ZNF277Q9NRM2 450 aaPredicted RBP15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 ARHGAP28Q9P2N2 729 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 MMP8P22894 467 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 CCND2P30279 289 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 GPX6P59796 221 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 MTMR2Q13614 643 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 TCP10LQ8TDR4 215 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 STK32AQ8WU08 396 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 HAPLN2Q9GZV7 340 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 JPH1Q9HDC5 661 aaPredicted RBP15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 GINM1Q9NU53 330 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 CYP39A1Q9NYL5 469 aa15.96■□□□□ 0.15
SEMA3B-203ENST00000419007 GDF10P55107 478 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 MSS51Q4VC12 460 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 ZBTB33Q86T24 672 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms