RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ITIH5Q86UX2 942 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 TMEM174Q8WUU8 243 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 PSMG2Q969U7 264 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 CCDC47Q96A33 483 aaKnown RBP17.7■□□□□ 0.42
LINC00404-201ENST00000418660 CCDC127Q96BQ5 260 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 CGRRF1Q99675 332 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 SEPT5Q99719 369 aaPredicted RBP17.7■□□□□ 0.42
LINC00404-201ENST00000418660 ACBD6Q9BR61 282 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 GPR88Q9GZN0 384 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 GOLPH3LQ9H4A5 285 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 GDPD2Q9HCC8 539 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 ARHGEF3Q9NR81 526 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 TCHHQ07283 1943 aa17.69■□□□□ 0.42
LINC00404-201ENST00000418660 NRG2O14511 850 aaPredicted RBP17.69■□□□□ 0.42
LINC00404-201ENST00000418660 HAPLN1P10915 354 aaPredicted RBP17.69■□□□□ 0.42
LINC00404-201ENST00000418660 GJA1P17302 382 aa17.69■□□□□ 0.42
LINC00404-201ENST00000418660 LHX1P48742 406 aa17.69■□□□□ 0.42
LINC00404-201ENST00000418660 PFKPQ01813 784 aa17.69■□□□□ 0.42
LINC00404-201ENST00000418660 TCF15Q12870 199 aa17.69■□□□□ 0.42
LINC00404-201ENST00000418660 NFE2Q16621 373 aaPredicted RBP17.69■□□□□ 0.42
LINC00404-201ENST00000418660 SOWAHAQ2M3V2 549 aa17.69■□□□□ 0.42
LINC00404-201ENST00000418660 MGAT5BQ3V5L5 792 aa17.69■□□□□ 0.42
LINC00404-201ENST00000418660 LIMS2Q7Z4I7 341 aa17.69■□□□□ 0.42
LINC00404-201ENST00000418660 SHKBP1Q8TBC3 707 aa17.69■□□□□ 0.42
LINC00404-201ENST00000418660 SMARCD2Q92925 531 aa17.69■□□□□ 0.42
LINC00404-201ENST00000418660 ZSWIM3Q96MP5 696 aa17.69■□□□□ 0.42
LINC00404-201ENST00000418660 ASB16Q96NS5 453 aa17.69■□□□□ 0.42
LINC00404-201ENST00000418660 PLA2G2FQ9BZM2 168 aa17.69■□□□□ 0.42
LINC00404-201ENST00000418660 KCTD10Q9H3F6 313 aa17.69■□□□□ 0.42
LINC00404-201ENST00000418660 ZFP14Q9HCL3 533 aa17.69■□□□□ 0.42
LINC00404-201ENST00000418660 DMAC2Q9NW81 257 aa17.69■□□□□ 0.42
LINC00404-201ENST00000418660 ABI2Q9NYB9 513 aaPredicted RBP17.69■□□□□ 0.42
LINC00404-201ENST00000418660 PCDHB5Q9Y5E4 795 aa17.69■□□□□ 0.42
LINC00404-201ENST00000418660 A0A1W2PRU2 124 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 STK25O00506 426 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 PDXKO00764 312 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 GABRDO14764 452 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 GALR2O43603 387 aaPredicted RBP17.68■□□□□ 0.42
LINC00404-201ENST00000418660 PI15O43692 258 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 RHOBTB3O94955 611 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 ZNF202O95125 648 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 FGF19O95750 216 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 PRR29P0C7W0 189 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 FCARP24071 287 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 CDR1P51861 262 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 DPYDQ12882 1025 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 VEPH1Q14D04 833 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 TEAD2Q15562 447 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 INTS6LQ5JSJ4 861 aaKnown RBP17.68■□□□□ 0.42
LINC00404-201ENST00000418660 PHLDB3Q6NSJ2 640 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 OSTM1Q86WC4 334 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 SLC9A9Q8IVB4 645 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 ADGRF2Q8IZF7 708 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 FAM200AQ8TCP9 573 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 GZF1Q9H116 711 aaPredicted RBP17.68■□□□□ 0.42
LINC00404-201ENST00000418660 IRF2BPLQ9H1B7 796 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 TBC1D17Q9HA65 648 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 TMLHEQ9NVH6 421 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 ZDBF2Q9HCK1 2354 aa17.68■□□□□ 0.42
LINC00404-201ENST00000418660 MUC6Q6W4X9 2439 aa17.67■□□□□ 0.42
LINC00404-201ENST00000418660 KIF20AO95235 890 aa17.67■□□□□ 0.42
LINC00404-201ENST00000418660 CST3P01034 146 aaPredicted RBP17.67■□□□□ 0.42
LINC00404-201ENST00000418660 ATF6P18850 670 aa17.67■□□□□ 0.42
LINC00404-201ENST00000418660 RFX1P22670 979 aa17.67■□□□□ 0.42
LINC00404-201ENST00000418660 ACAT1P24752 427 aaKnown RBP17.67■□□□□ 0.42
LINC00404-201ENST00000418660 PCSK1P29120 753 aa17.67■□□□□ 0.42
LINC00404-201ENST00000418660 ZSCAN18Q8TBC5 510 aaPredicted RBP17.67■□□□□ 0.42
LINC00404-201ENST00000418660 ZNF516Q92618 1163 aa17.67■□□□□ 0.42
LINC00404-201ENST00000418660 SHDQ96IW2 340 aa17.67■□□□□ 0.42
LINC00404-201ENST00000418660 PKMYT1Q99640 499 aa17.67■□□□□ 0.42
LINC00404-201ENST00000418660 LPIN3Q9BQK8 851 aa17.67■□□□□ 0.42
LINC00404-201ENST00000418660 TRPV4Q9HBA0 871 aa17.67■□□□□ 0.42
LINC00404-201ENST00000418660 ZNF334Q9HCZ1 680 aaPredicted RBP17.67■□□□□ 0.42
LINC00404-201ENST00000418660 GABRR2P28476 465 aa17.66■□□□□ 0.42
LINC00404-201ENST00000418660 AP3M2P53677 418 aa17.66■□□□□ 0.42
LINC00404-201ENST00000418660 STARD6P59095 220 aa17.66■□□□□ 0.42
LINC00404-201ENST00000418660 PRKCQQ04759 706 aa17.66■□□□□ 0.42
LINC00404-201ENST00000418660 TAF12Q16514 161 aa17.66■□□□□ 0.42
LINC00404-201ENST00000418660 SLC44A4Q53GD3 710 aa17.66■□□□□ 0.42
LINC00404-201ENST00000418660 GAREM2Q75VX8 874 aa17.66■□□□□ 0.42
LINC00404-201ENST00000418660 PARD3BQ8TEW8 1205 aa17.66■□□□□ 0.42
LINC00404-201ENST00000418660 GIPC2Q8TF65 315 aa17.66■□□□□ 0.42
LINC00404-201ENST00000418660 CCDC34Q96HJ3 373 aa17.66■□□□□ 0.42
LINC00404-201ENST00000418660 PI4K2AQ9BTU6 479 aa17.66■□□□□ 0.42
LINC00404-201ENST00000418660 ATXN3LQ9H3M9 355 aa17.66■□□□□ 0.42
LINC00404-201ENST00000418660 ABCB6Q9NP58 842 aa17.66■□□□□ 0.42
LINC00404-201ENST00000418660 GTF3C4Q9UKN8 822 aa17.66■□□□□ 0.42
LINC00404-201ENST00000418660 GOLGA6L4A6NEF3 574 aa17.65■□□□□ 0.42
LINC00404-201ENST00000418660 STAU1O95793 577 aaKnown RBP17.65■□□□□ 0.42
LINC00404-201ENST00000418660 NR3C1P04150 777 aa17.65■□□□□ 0.42
LINC00404-201ENST00000418660 FAM163BP0C2L3 166 aa17.65■□□□□ 0.42
LINC00404-201ENST00000418660 WARSP23381 471 aaKnown RBP17.65■□□□□ 0.42
LINC00404-201ENST00000418660 HOXD11P31277 338 aaPredicted RBP17.65■□□□□ 0.42
LINC00404-201ENST00000418660 ATICP31939 592 aa17.65■□□□□ 0.42
LINC00404-201ENST00000418660 CASP4P49662 377 aa17.65■□□□□ 0.42
LINC00404-201ENST00000418660 CLDN10P78369 228 aa17.65■□□□□ 0.42
LINC00404-201ENST00000418660 TRPC3Q13507 836 aa17.65■□□□□ 0.42
LINC00404-201ENST00000418660 SNW1Q13573 536 aaKnown RBP17.65■□□□□ 0.42
LINC00404-201ENST00000418660 KCNB1Q14721 858 aa17.65■□□□□ 0.42
LINC00404-201ENST00000418660 MLF2Q15773 248 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms