RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 PLXNB2O15031 1838 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 KPNA7A9QM74 516 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 CILPO75339 1184 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 GJB1P08034 283 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 H2AFXP16104 143 aaPredicted RBP8.87□□□□□ -0.99
USP54-203ENST00000418501 TNFRSF8P28908 595 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 SDC4P31431 198 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 GRK4P32298 578 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 CACNB2Q08289 660 aaPredicted RBP8.87□□□□□ -0.99
USP54-203ENST00000418501 HOOK3Q86VS8 718 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 CDR2LQ86X02 465 aaPredicted RBP8.87□□□□□ -0.99
USP54-203ENST00000418501 RNF169Q8NCN4 708 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 EXD1Q8NHP7 514 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 IFT81Q8WYA0 676 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 TRIB2Q92519 343 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 SEPT8Q92599 483 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 APBB2Q92870 758 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 FOXP3Q9BZS1 431 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 PGK1P00558 417 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 ZFXP17010 805 aaPredicted RBP8.87□□□□□ -0.99
USP54-203ENST00000418501 ACO1P21399 889 aaKnown RBP8.87□□□□□ -0.99
USP54-203ENST00000418501 CTNNA1P35221 906 aaKnown RBP8.87□□□□□ -0.99
USP54-203ENST00000418501 ZBTB41Q5SVQ8 909 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 CC2D1AQ6P1N0 951 aaPredicted RBP8.87□□□□□ -0.99
USP54-203ENST00000418501 FBXO38Q6PIJ6 1188 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 RUFY4Q6ZNE9 571 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 SERINC5Q86VE9 423 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 RASGEF1CQ8N431 466 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 FNIP1Q8TF40 1166 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 STK32AQ8WU08 396 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 TRPM7Q96QT4 1865 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 MINDY3Q9H8M7 445 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 PRDM10Q9NQV6 1147 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 NENFQ9UMX5 172 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 GOLGA8SH3BPF8 625 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 SMAPO00193 183 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 STK10O94804 968 aaKnown RBP8.87□□□□□ -0.99
USP54-203ENST00000418501 UNGP13051 313 aaPredicted RBP8.87□□□□□ -0.99
USP54-203ENST00000418501 CHRNB2P17787 502 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 GJC1P36383 396 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 RNASELQ05823 741 aaKnown RBP8.87□□□□□ -0.99
USP54-203ENST00000418501 IFFO1Q0D2I5 559 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 BST2Q10589 180 aaKnown RBP8.87□□□□□ -0.99
USP54-203ENST00000418501 KRT81Q14533 505 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 MARCH8Q5T0T0 291 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 PLEKHA7Q6IQ23 1121 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 ZSWIM2Q8NEG5 633 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 CCDC114Q96M63 670 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 SYT11Q9BT88 431 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 RSAD1Q9HA92 442 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 FAM105AQ9NUU6 356 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 ST3GAL5Q9UNP4 418 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 IPPQ9Y573 584 aa8.87□□□□□ -0.99
USP54-203ENST00000418501 CTSHP09668 335 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 MMP8P22894 467 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 RRM1P23921 792 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 CDH5P33151 784 aaPredicted RBP8.86□□□□□ -0.99
USP54-203ENST00000418501 ZNF132P52740 706 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 GUCY2DQ02846 1103 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 GRIK3Q13003 919 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 SLMAPQ14BN4 828 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 C9orf57Q5W0N0 161 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 ADGRF2Q8IZF7 708 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 ARFGAP2Q8N6H7 521 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 CCDC89Q8N998 374 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 CD99L2Q8TCZ2 262 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 HSFY1Q96LI6 401 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 APOBEC3GQ9HC16 384 aaKnown RBP8.86□□□□□ -0.99
USP54-203ENST00000418501 RNF186Q9NXI6 227 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 RRN3Q9NYV6 651 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 FLRT1Q9NZU1 646 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 AJAP1Q9UKB5 411 aaPredicted RBP8.86□□□□□ -0.99
USP54-203ENST00000418501 SIGLEC16A6NMB1 481 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 KIF3CO14782 793 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 SCNN1AP37088 669 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 ASPAP45381 313 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 NDST1P52848 882 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 INCA1Q0VD86 236 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 ELAVL2Q12926 359 aaKnown RBP8.86□□□□□ -0.99
USP54-203ENST00000418501 GOLGA7BQ2TAP0 167 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 LCLAT1Q6UWP7 414 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 DCP1BQ8IZD4 617 aaKnown RBP8.86□□□□□ -0.99
USP54-203ENST00000418501 COG1Q8WTW3 980 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 R3HDMLQ9H3Y0 253 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 ABLIM1O14639 778 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 EOMESO95936 686 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 CST3P01034 146 aaPredicted RBP8.86□□□□□ -0.99
USP54-203ENST00000418501 GPD1P21695 349 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 RNASE9P60153 205 aaKnown RBP8.86□□□□□ -0.99
USP54-203ENST00000418501 PLCB3Q01970 1234 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 BOLA3Q53S33 107 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 FAM102AQ5T9C2 384 aaPredicted RBP8.86□□□□□ -0.99
USP54-203ENST00000418501 C4orf50Q6ZRC1 276 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 MON1BQ7L1V2 547 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 C18orf25Q96B23 403 aaPredicted RBP8.86□□□□□ -0.99
USP54-203ENST00000418501 PCDHB18PQ96TA0 734 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 TBCBQ99426 244 aa8.86□□□□□ -0.99
USP54-203ENST00000418501 OXCT2Q9BYC2 517 aaPredicted RBP8.86□□□□□ -0.99
USP54-203ENST00000418501 MRPL9Q9BYD2 267 aaKnown RBP8.86□□□□□ -0.99
USP54-203ENST00000418501 GDAP2Q9NXN4 497 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms