RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 HERPUD2Q9BSE4 406 aa6.12□□□□□ -1.43
RFC4-204ENST00000417876 TEX101Q9BY14 249 aa6.12□□□□□ -1.43
RFC4-204ENST00000417876 MS4A7Q9GZW8 240 aaPredicted RBP6.12□□□□□ -1.43
RFC4-204ENST00000417876 TBC1D23Q9NUY8 699 aa6.12□□□□□ -1.43
RFC4-204ENST00000417876 ITGB1BP2Q9UKP3 347 aa6.12□□□□□ -1.43
RFC4-204ENST00000417876 CLCA2Q9UQC9 943 aa6.12□□□□□ -1.43
RFC4-204ENST00000417876 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.12□□□□□ -1.43
RFC4-204ENST00000417876 MORC2Q9Y6X9 1032 aaPredicted RBP6.12□□□□□ -1.43
RFC4-204ENST00000417876 ARHGAP35Q9NRY4 1499 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 ZNF185O15231 689 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 IPO13O94829 963 aaKnown RBP6.11□□□□□ -1.43
RFC4-204ENST00000417876 CHEK2O96017 543 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 BTF3P20290 206 aaKnown RBP6.11□□□□□ -1.43
RFC4-204ENST00000417876 MGAT1P26572 445 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 KLRC1P26715 233 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 PDIA3P30101 505 aaKnown RBP6.11□□□□□ -1.43
RFC4-204ENST00000417876 APOBEC3AP31941 199 aaPredicted RBP6.11□□□□□ -1.43
RFC4-204ENST00000417876 CHKAP35790 457 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 TXKP42681 527 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 GALNT1Q10472 559 aaPredicted RBP6.11□□□□□ -1.43
RFC4-204ENST00000417876 PUM3Q15397 648 aaKnown RBP6.11□□□□□ -1.43
RFC4-204ENST00000417876 ZFYVE27Q5T4F4 411 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 AGAP9Q5VTM2 703 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 TSHZ3Q63HK5 1081 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 CATSPERGQ6ZRH7 1159 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 HTR3DQ70Z44 454 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 RNF44Q7L0R7 432 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 ZNF280BQ86YH2 543 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 VGLL2Q8N8G2 317 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 ANKRD42Q8N9B4 389 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 Q8TCH9 128 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 ZNF483Q8TF39 744 aaPredicted RBP6.11□□□□□ -1.43
RFC4-204ENST00000417876 WWC2-AS2Q96NR7 200 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 MNTQ99583 582 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 MESP1Q9BRJ9 268 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 HESX1Q9UBX0 185 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 MID2Q9UJV3 735 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 CDYLQ9Y232 598 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 PCDHGB3Q9Y5G1 929 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 FER1L4A9Z1Z3 1794 aa6.11□□□□□ -1.43
RFC4-204ENST00000417876 CLCA1A8K7I4 914 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 PATE3B3GLJ2 98 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 AREL1O15033 823 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 NDST3O95803 873 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 A1BGP04217 495 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 CHRM3P20309 590 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 SCNN1GP51170 649 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 ELF2Q15723 593 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 AMOTQ4VCS5 1084 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 SLC44A4Q53GD3 710 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 DCAF17Q5H9S7 520 aaPredicted RBP6.1□□□□□ -1.43
RFC4-204ENST00000417876 NAIF1Q69YI7 327 aaPredicted RBP6.1□□□□□ -1.43
RFC4-204ENST00000417876 MAMDC4Q6UXC1 1216 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 SLC30A10Q6XR72 485 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 SPOCD1Q6ZMY3 1216 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 POLNQ7Z5Q5 900 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 SGMS1Q86VZ5 419 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 RHOT2Q8IXI1 618 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 Q8NA96 180 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 MYRIPQ8NFW9 859 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 SPSB4Q96A44 273 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 LRRC46Q96FV0 321 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 RBM15Q96T37 977 aaKnown RBP eCLIP6.1□□□□□ -1.43
RFC4-204ENST00000417876 CNPPD1Q9BV87 410 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 STK33Q9BYT3 514 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 SMOC2Q9H3U7 446 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 SERHLQ9NQF3 203 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 LUZP4Q9P127 313 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 CTTNBP2NLQ9P2B4 639 aa6.1□□□□□ -1.43
RFC4-204ENST00000417876 RGS17Q9UGC6 210 aaPredicted RBP6.1□□□□□ -1.43
RFC4-204ENST00000417876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.09□□□□□ -1.43
RFC4-204ENST00000417876 XDHP47989 1333 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 CCDC189A1A4V9 331 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 CAPN14A8MX76 684 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 GRXCR1A8MXD5 290 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 MYO1CO00159 1063 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 POLRMTO00411 1230 aaKnown RBP6.09□□□□□ -1.43
RFC4-204ENST00000417876 FFAR2O15552 330 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 THAP12O43422 761 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 RASSF9O75901 435 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 ELANEP08246 267 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 ALDH9A1P49189 494 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 RNASE9P60153 205 aaKnown RBP6.09□□□□□ -1.43
RFC4-204ENST00000417876 MXRA7P84157 204 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 STARD3Q14849 445 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 TMEM95Q3KNT9 176 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 ZIK1Q3SY52 487 aaPredicted RBP6.09□□□□□ -1.43
RFC4-204ENST00000417876 TAF2Q6P1X5 1199 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 CIR1Q86X95 450 aaPredicted RBP6.09□□□□□ -1.43
RFC4-204ENST00000417876 GSPT2Q8IYD1 628 aaKnown RBP6.09□□□□□ -1.43
RFC4-204ENST00000417876 ZNF527Q8NB42 609 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 GLIS1Q8NBF1 620 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 POC1BQ8TC44 478 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 SLC46A1Q96NT5 459 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 TRIB1Q96RU8 372 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 HEPHQ9BQS7 1158 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 ZSWIM1Q9BR11 485 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.09□□□□□ -1.43
RFC4-204ENST00000417876 TTYH3Q9C0H2 523 aa6.09□□□□□ -1.43
RFC4-204ENST00000417876 ZNF212Q9UDV6 495 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms