RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 MAPRE1Q15691 268 aaKnown RBP9.03□□□□□ -0.96
TRIM48-201ENST00000417545 ASIC2Q16515 512 aa9.03□□□□□ -0.96
TRIM48-201ENST00000417545 RTP2Q5QGT7 225 aa9.03□□□□□ -0.96
TRIM48-201ENST00000417545 SPRED2Q7Z698 418 aa9.03□□□□□ -0.96
TRIM48-201ENST00000417545 UNC93AQ86WB7 457 aa9.03□□□□□ -0.96
TRIM48-201ENST00000417545 VSTM4Q8IW00 320 aa9.03□□□□□ -0.96
TRIM48-201ENST00000417545 SPC24Q8NBT2 197 aa9.03□□□□□ -0.96
TRIM48-201ENST00000417545 RBBP8NLQ8NC74 664 aaPredicted RBP9.03□□□□□ -0.96
TRIM48-201ENST00000417545 LMO3Q8TAP4 145 aa9.03□□□□□ -0.96
TRIM48-201ENST00000417545 SPPL3Q8TCT6 385 aa9.03□□□□□ -0.96
TRIM48-201ENST00000417545 AUTS2Q8WXX7 1259 aa9.03□□□□□ -0.96
TRIM48-201ENST00000417545 PIK3R5Q8WYR1 880 aa9.03□□□□□ -0.96
TRIM48-201ENST00000417545 JAKMIP2Q96AA8 810 aa9.03□□□□□ -0.96
TRIM48-201ENST00000417545 HEXIM2Q96MH2 286 aaKnown RBP9.03□□□□□ -0.96
TRIM48-201ENST00000417545 FAM161BQ96MY7 647 aa9.03□□□□□ -0.96
TRIM48-201ENST00000417545 ARID3AQ99856 593 aa9.03□□□□□ -0.96
TRIM48-201ENST00000417545 SYT15Q9BQS2 421 aa9.03□□□□□ -0.96
TRIM48-201ENST00000417545 ZBP1Q9H171 429 aa9.03□□□□□ -0.96
TRIM48-201ENST00000417545 NUCKS1Q9H1E3 243 aaKnown RBP9.03□□□□□ -0.96
TRIM48-201ENST00000417545 GANQ9H2C0 597 aa9.03□□□□□ -0.96
TRIM48-201ENST00000417545 FAM124BQ9H5Z6 455 aaPredicted RBP9.03□□□□□ -0.96
TRIM48-201ENST00000417545 CDH9Q9ULB4 789 aa9.03□□□□□ -0.96
TRIM48-201ENST00000417545 BARX2Q9UMQ3 279 aaPredicted RBP9.03□□□□□ -0.96
TRIM48-201ENST00000417545 LUC7L2Q9Y383 392 aaKnown RBP9.03□□□□□ -0.96
TRIM48-201ENST00000417545 CDY1Q9Y6F8 540 aa9.03□□□□□ -0.96
TRIM48-201ENST00000417545 MED7O43513 233 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 PTMAP06454 111 aaKnown RBP9.02□□□□□ -0.97
TRIM48-201ENST00000417545 SRGAP2BP0DMP2 458 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 IGFBP4P22692 258 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 IGFBP6P24592 240 aaPredicted RBP9.02□□□□□ -0.97
TRIM48-201ENST00000417545 NDUFV1P49821 464 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 PDE6CP51160 858 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 SLC8A3P57103 927 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 BPIFB4P59827 614 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 PSMC1P62191 440 aaKnown RBP9.02□□□□□ -0.97
TRIM48-201ENST00000417545 ARID5AQ03989 594 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 PTK2Q05397 1052 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 ORC1Q13415 861 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 SLC39A12Q504Y0 691 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 TDRD12Q587J7 1177 aaKnown RBP9.02□□□□□ -0.97
TRIM48-201ENST00000417545 MDH1BQ5I0G3 518 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 SFMBT2Q5VUG0 894 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 SCARA3Q6AZY7 606 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 C4orf50Q6ZRC1 276 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 TAS1R1Q7RTX1 841 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.02□□□□□ -0.97
TRIM48-201ENST00000417545 ACOT1Q86TX2 421 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 SPATA2LQ8IUW3 424 aaPredicted RBP9.02□□□□□ -0.97
TRIM48-201ENST00000417545 MICALL1Q8N3F8 863 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 KAT5Q92993 513 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 TMEM176AQ96HP8 235 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 ACBD6Q9BR61 282 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 STK33Q9BYT3 514 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 SDCBP2Q9H190 292 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 PRDM12Q9H4Q4 367 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 SIX2Q9NPC8 291 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 SEPT11Q9NVA2 429 aaKnown RBP9.02□□□□□ -0.97
TRIM48-201ENST00000417545 HESX1Q9UBX0 185 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 FBXL5Q9UKA1 691 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 STXBP5LQ9Y2K9 1186 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 MYH10P35580 1976 aa9.02□□□□□ -0.97
TRIM48-201ENST00000417545 A0A1W2PQJ5 194 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 FSD2A1L4K1 749 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 LRRC53A6NM62 1247 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 AKR1B15C9JRZ8 316 aaPredicted RBP9.01□□□□□ -0.97
TRIM48-201ENST00000417545 F8VZ95 297 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 RFXAPO00287 272 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 AP5Z1O43299 807 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 THAP12O43422 761 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 NRDCO43847 1150 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 CILPO75339 1184 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 GFPT2O94808 682 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 LINC00271P0C7V0 271 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 FERP16591 822 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 PTPN1P18031 435 aaKnown RBP9.01□□□□□ -0.97
TRIM48-201ENST00000417545 RPL17P18621 184 aaKnown RBP9.01□□□□□ -0.97
TRIM48-201ENST00000417545 ADORA2BP29275 332 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 CDC25BP30305 580 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 GNA15P30679 374 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 CASP14P31944 242 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 OR1D2P34982 312 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 SOX5P35711 763 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 ERVFC1P60507 584 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 ZBED6P86452 979 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 INCA1Q0VD86 236 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 PTPN14Q15678 1187 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 NFE2Q16621 373 aaPredicted RBP9.01□□□□□ -0.97
TRIM48-201ENST00000417545 SGO2Q562F6 1265 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 FIGNQ5HY92 759 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 INTS6LQ5JSJ4 861 aaKnown RBP9.01□□□□□ -0.97
TRIM48-201ENST00000417545 LIN9Q5TKA1 542 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 CD300LGQ6UXG3 332 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 OSTM1Q86WC4 334 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 PALB2Q86YC2 1186 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 GPIHBP1Q8IV16 184 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 CNGA4Q8IV77 575 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 B3GALNT2Q8NCR0 500 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 KBTBD7Q8WVZ9 684 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 LRCH3Q96II8 777 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 KREMEN1Q96MU8 473 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms