RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 CCNE1P24864 410 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 GNL1P36915 607 aaPredicted RBP11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 TUFMP49411 452 aaKnown RBP11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 STX17P56962 302 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 PSMC1P62191 440 aaKnown RBP11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 FKBP3Q00688 224 aaKnown RBP11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 SMARCB1Q12824 385 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 NFE2Q16621 373 aaPredicted RBP11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 CCDC40Q4G0X9 1142 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 ZCWPW2Q504Y3 356 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 CENPPQ6IPU0 288 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 DPH6Q7L8W6 267 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 ITIH5Q86UX2 942 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 OSTM1Q86WC4 334 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 CREBRFQ8IUR6 639 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 SPATA2LQ8IUW3 424 aaPredicted RBP11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 ZDHHC14Q8IZN3 488 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 ST13P5Q8NFI4 369 aaPredicted RBP11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 CXorf38Q8TB03 319 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 ITFG1Q8TB96 612 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 SPPL2BQ8TCT7 592 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 TMEM174Q8WUU8 243 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 ELMO3Q96BJ8 720 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 MYADMQ96S97 322 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 RTP3Q9BQQ7 232 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 SYT15Q9BQS2 421 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 ACBD6Q9BR61 282 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 PI4K2AQ9BTU6 479 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 GZF1Q9H116 711 aaPredicted RBP11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 NUP62CLQ9H1M0 184 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 SLITRK6Q9H5Y7 841 aa11.84□□□□□ -0.51
TM9SF4-203ENST00000417389 A8MXQ7 604 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 PI4K2BG5E9Z4 385 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 ZNF197O14709 1029 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 IKBKBO14920 756 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 SLC16A3O15427 465 aaKnown RBP11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 HCRTO43612 131 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 HLA-DRAP01903 254 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 C4BPAP04003 597 aaKnown RBP11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 POU2F2P09086 479 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 CD44P16070 742 aaKnown RBP11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 RAP1GAPP47736 663 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 PMS1P54277 932 aaKnown RBP11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 CYP27A1Q02318 531 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 PAK1Q13153 545 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 MTMR3Q13615 1198 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 MORC3Q14149 939 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 PTPN21Q16825 1174 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 SGSM1Q2NKQ1 1148 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 COBLL1Q53SF7 1204 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 INTS6LQ5JSJ4 861 aaKnown RBP11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 C4orf50Q6ZRC1 276 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 SV2AQ7L0J3 742 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 LRRTM3Q86VH5 581 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 SCN4BQ8IWT1 228 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 HS6ST3Q8IZP7 471 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 TTC9BQ8N6N2 239 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 SPATA18Q8TC71 538 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 GPR152Q8TDT2 470 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 GIPC2Q8TF65 315 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 C2orf15Q8WU43 125 aaKnown RBP11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 FGF13Q92913 245 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 MCRS1Q96EZ8 462 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 GCNAQ96QF7 691 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 MRPL45Q9BRJ2 306 aaKnown RBP11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 MKNK1Q9BUB5 465 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 CRISPLD1Q9H336 500 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 CLSTN2Q9H4D0 955 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 CEP72Q9P209 647 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 KIAA1468Q9P260 1216 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 ARMCX3Q9UH62 379 aaPredicted RBP11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 GTF3C4Q9UKN8 822 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 CDH7Q9ULB5 785 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 SORCS3Q9UPU3 1222 aa11.83□□□□□ -0.52
TM9SF4-203ENST00000417389 MTCL1Q9Y4B5 1905 aaKnown RBP11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 N4BP1O75113 896 aaKnown RBP11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 VNN1O95497 513 aa11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 LAMP2P13473 410 aa11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 TRIM21P19474 475 aaKnown RBP11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 WARSP23381 471 aaKnown RBP11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 LMO2P25791 158 aa11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 MXI1P50539 228 aa11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 CLDN10P78369 228 aa11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 MAPRE1Q15691 268 aaKnown RBP11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 TPD52L1Q16890 204 aaPredicted RBP11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 ZACNQ401N2 412 aa11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 MDH1BQ5I0G3 518 aa11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 TMEM31Q5JXX7 168 aa11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 KRT39Q6A163 491 aa11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 SPOPLQ6IQ16 392 aa11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 CLEC17AQ6ZS10 378 aa11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 TRIML1Q8N9V2 468 aa11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 LPIN3Q9BQK8 851 aa11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 MED10Q9BTT4 135 aa11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 SMYD3Q9H7B4 428 aa11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 KCNK12Q9HB15 430 aa11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 TMEM8AQ9HCN3 771 aa11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 TMLHEQ9NVH6 421 aa11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 MAGEC2Q9UBF1 373 aaPredicted RBP11.82□□□□□ -0.52
TM9SF4-203ENST00000417389 FBXL21Q9UKT6 434 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms