RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 APOL5Q9BWW9 433 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 PABPC3Q9H361 631 aaKnown RBP12.56□□□□□ -0.4
UBR4-205ENST00000417040 PCDHGB4Q9UN71 923 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 E9PBE3 544 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 KLHL41O60662 606 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 SNUPNO95149 360 aaKnown RBP12.56□□□□□ -0.4
UBR4-205ENST00000417040 PSMC3P17980 439 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 KCNK10P57789 538 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 DPY19L2Q6NUT2 758 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 MAP3K14Q99558 947 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 ZNF556Q9HAH1 456 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 RUVBL2Q9Y230 463 aaKnown RBP12.56□□□□□ -0.4
UBR4-205ENST00000417040 F8W8V4 182 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 AGRPO00253 132 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 TPP2P29144 1249 aaPredicted RBP12.56□□□□□ -0.4
UBR4-205ENST00000417040 WLSQ5T9L3 541 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 WDR93Q6P2C0 686 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 SLC13A5Q86YT5 568 aaPredicted RBP12.56□□□□□ -0.4
UBR4-205ENST00000417040 HES6Q96HZ4 224 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 GCNAQ96QF7 691 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 PAPOLBQ9NRJ5 636 aaKnown RBP12.56□□□□□ -0.4
UBR4-205ENST00000417040 SCAF8Q9UPN6 1271 aaKnown RBP12.56□□□□□ -0.4
UBR4-205ENST00000417040 SHROOM2Q13796 1616 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 MAP3K10Q02779 954 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 MAPK7Q13164 816 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 ORC2Q13416 577 aaPredicted RBP12.55□□□□□ -0.4
UBR4-205ENST00000417040 SUPT20HL1Q3ZLR7 823 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 LDHDQ86WU2 507 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 PCYOX1LQ8NBM8 494 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 ASZ1Q8WWH4 475 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 WRNIP1Q96S55 665 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 SCN3BQ9NY72 215 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 PRDM4Q9UKN5 801 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 RNF103O00237 685 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 HLA-DRAP01903 254 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 KRT16P08779 473 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 ZNF23P17027 643 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 ANGPT1Q15389 498 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 C12orf60Q5U649 245 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 PKN3Q6P5Z2 889 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 ATPAF2Q8N5M1 289 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 ZNF513Q8N8E2 541 aaPredicted RBP12.55□□□□□ -0.4
UBR4-205ENST00000417040 ZSWIM2Q8NEG5 633 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 SHCBP1Q8NEM2 672 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 DNAJC7Q99615 494 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 CDC42EP4Q9H3Q1 356 aaKnown RBP12.55□□□□□ -0.4
UBR4-205ENST00000417040 DMGDHQ9UI17 866 aaKnown RBP12.55□□□□□ -0.4
UBR4-205ENST00000417040 A0A0U1RQJ8 604 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 IRF1P10914 325 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 PTPN7P35236 360 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 SLC9A5Q14940 896 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 PABPC5Q96DU9 382 aaKnown RBP12.55□□□□□ -0.4
UBR4-205ENST00000417040 DNAJC16Q9Y2G8 782 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 EFCAB6Q5THR3 1501 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 SLC37A4O43826 429 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 CENPCQ03188 943 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 RASA2Q15283 850 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 GOLGA7BQ2TAP0 167 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.55□□□□□ -0.4
UBR4-205ENST00000417040 C5orf58C9J3I9 102 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 POLBP06746 335 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 ASNSP08243 561 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 SOAT1P35610 550 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 GALNTL6Q49A17 601 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 C1orf131Q8NDD1 294 aaKnown RBP12.55□□□□□ -0.4
UBR4-205ENST00000417040 FEZF2Q8TBJ5 459 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 ZSWIM1Q9BR11 485 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 LACRTQ9GZZ8 138 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 CYP4F12Q9HCS2 524 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 PKP3Q9Y446 797 aa12.55□□□□□ -0.4
UBR4-205ENST00000417040 MBD5Q9P267 1494 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 RECQLP46063 649 aaPredicted RBP12.54□□□□□ -0.4
UBR4-205ENST00000417040 LAMC2Q13753 1193 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 TRADDQ15628 312 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 GPR162Q16538 588 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 AMHR2Q16671 573 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 C2orf40Q9H1Z8 148 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 TMEM51Q9NW97 253 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 ZNF212Q9UDV6 495 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 AP3B1O00203 1094 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 IMPDH2P12268 514 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 RFC5P40937 340 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 CDK17Q00537 523 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 MFN1Q8IWA4 741 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 EFHBQ8N7U6 833 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 SLC7A14Q8TBB6 771 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 ARHGEF1Q92888 912 aaKnown RBP12.54□□□□□ -0.4
UBR4-205ENST00000417040 ZNF669Q96BR6 464 aaPredicted RBP12.54□□□□□ -0.4
UBR4-205ENST00000417040 NSUN4Q96CB9 384 aaKnown RBP12.54□□□□□ -0.4
UBR4-205ENST00000417040 FAM167AQ96KS9 214 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 RPAP3Q9H6T3 665 aaPredicted RBP12.54□□□□□ -0.4
UBR4-205ENST00000417040 PTPRHQ9HD43 1115 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 CNTNAP5Q8WYK1 1306 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 SPRP35270 261 aaPredicted RBP12.54□□□□□ -0.4
UBR4-205ENST00000417040 DEFA1P59665 94 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 DEFA3P59666 94 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 UTS2BQ765I0 119 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 MTERF3Q96E29 417 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 FAM32AQ9Y421 112 aaKnown RBP12.54□□□□□ -0.4
UBR4-205ENST00000417040 PCDHA10Q9Y5I2 948 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms