RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 MFAP3LO75121 409 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 TACC1O75410 805 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 SOD2P04179 222 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 CYP11A1P05108 521 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 CFHP08603 1231 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 KRT5P13647 590 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 TYMPP19971 482 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 TBXAS1P24557 533 aaPredicted RBP8.61□□□□□ -1.03
MDC1-203ENST00000417033 BRD2P25440 801 aaKnown RBP8.61□□□□□ -1.03
MDC1-203ENST00000417033 KRT9P35527 623 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 SOX5P35711 763 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 USP8P40818 1118 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 ZNF132P52740 706 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 RAD23BP54727 409 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 MFAP3P55082 362 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 ERVFC1P60507 584 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 ERVK-21P61565 698 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 ARID5AQ03989 594 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 INCA1Q0VD86 236 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 CAMK1Q14012 370 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 RAB30Q15771 203 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 FIGNQ5HY92 759 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 OVOS1Q6IE37 1185 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 TMEM270Q6UE05 265 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.61□□□□□ -1.03
MDC1-203ENST00000417033 CACNA2D4Q7Z3S7 1137 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 DDX53Q86TM3 631 aaKnown RBP8.61□□□□□ -1.03
MDC1-203ENST00000417033 ACOT1Q86TX2 421 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 LRRTM3Q86VH5 581 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 GLYCTKQ8IVS8 523 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 DRC7Q8IY82 874 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 VPS52Q8N1B4 723 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 TC2NQ8N9U0 490 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 SLC4A11Q8NBS3 891 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 SPPL3Q8TCT6 385 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 SLC20A1Q8WUM9 679 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 ARNTL2Q8WYA1 636 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 RIN2Q8WYP3 895 aaPredicted RBP8.61□□□□□ -1.03
MDC1-203ENST00000417033 TFAP2BQ92481 460 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 TIFAQ96CG3 184 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 SPAG5Q96R06 1193 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 STK33Q9BYT3 514 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 RHOBTB2Q9BYZ6 727 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 ZBP1Q9H171 429 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 CYP3A43Q9HB55 503 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 CRTAC1Q9NQ79 661 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 AAASQ9NRG9 546 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 FAM49BQ9NUQ9 324 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 TMLHEQ9NVH6 421 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 DDX43Q9NXZ2 648 aaKnown RBP8.61□□□□□ -1.03
MDC1-203ENST00000417033 CAPN11Q9UMQ6 739 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 PCDHB12Q9Y5F1 795 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.61□□□□□ -1.03
MDC1-203ENST00000417033 MYO7AQ13402 2215 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 A0A1W2PQJ5 194 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 MYBPHLA2RUH7 354 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 A8MXQ7 604 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 C5orf67F2Z3F1 127 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 SYN3O14994 580 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 TBC1D4O60343 1298 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 PLEKP08567 350 aaPredicted RBP8.6□□□□□ -1.03
MDC1-203ENST00000417033 SKILP12757 684 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 P4HA1P13674 534 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 CCDC130P13994 396 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 CLCN1P35523 988 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 PPM1AP35813 382 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 GLUD2P49448 558 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 SMAD3P84022 425 aaKnown RBP8.6□□□□□ -1.03
MDC1-203ENST00000417033 PLCB3Q01970 1234 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 YWHAHQ04917 246 aaPredicted RBP8.6□□□□□ -1.03
MDC1-203ENST00000417033 GPM6BQ13491 265 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 MRPL58Q14197 206 aaKnown RBP8.6□□□□□ -1.03
MDC1-203ENST00000417033 PTPN14Q15678 1187 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 CTXN3Q4LDR2 81 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 PRPF38BQ5VTL8 546 aaKnown RBP8.6□□□□□ -1.03
MDC1-203ENST00000417033 PLPP4Q5VZY2 271 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.6□□□□□ -1.03
MDC1-203ENST00000417033 NOP9Q86U38 636 aaKnown RBP8.6□□□□□ -1.03
MDC1-203ENST00000417033 SLC47A2Q86VL8 602 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 PPFIBP1Q86W92 1011 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 FAM71AQ8IYT1 594 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 TTC9BQ8N6N2 239 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 C12orf29Q8N999 325 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 LNX1Q8TBB1 728 aaPredicted RBP8.6□□□□□ -1.03
MDC1-203ENST00000417033 POF1BQ8WVV4 589 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 PIK3R5Q8WYR1 880 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 LRCH3Q96II8 777 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 PDLIM2Q96JY6 352 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 PKMYT1Q99640 499 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 SYT15Q9BQS2 421 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 TTPALQ9BTX7 342 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 ADAM33Q9BZ11 813 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 SNX25Q9H3E2 840 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 CHST7Q9NS84 486 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 FBXL5Q9UKA1 691 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 BARX2Q9UMQ3 279 aaPredicted RBP8.6□□□□□ -1.03
MDC1-203ENST00000417033 CNTN6Q9UQ52 1028 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 STXBP5LQ9Y2K9 1186 aa8.6□□□□□ -1.03
MDC1-203ENST00000417033 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.6□□□□□ -1.031e-7■■□□□ 11.5
MDC1-203ENST00000417033 COL4A4P53420 1690 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms