RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 GABRR2P28476 465 aa18.93■□□□□ 0.62
PDLIM2-208ENST00000416159 RPS9P46781 194 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-208ENST00000416159 FOXD4L6Q3SYB3 417 aaPredicted RBP18.93■□□□□ 0.62
PDLIM2-208ENST00000416159 ZC3H14Q6PJT7 736 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-208ENST00000416159 FOXD4L3Q6VB84 417 aaPredicted RBP18.93■□□□□ 0.62
PDLIM2-208ENST00000416159 YAF2Q8IY57 180 aa18.93■□□□□ 0.62
PDLIM2-208ENST00000416159 TMEM86AQ8N2M4 240 aa18.93■□□□□ 0.62
PDLIM2-208ENST00000416159 PDCL2Q8N4E4 241 aa18.93■□□□□ 0.62
PDLIM2-208ENST00000416159 SPATA18Q8TC71 538 aa18.93■□□□□ 0.62
PDLIM2-208ENST00000416159 ZNF507Q8TCN5 953 aa18.93■□□□□ 0.62
PDLIM2-208ENST00000416159 ANKRD36BP1Q96IX9 119 aa18.93■□□□□ 0.62
PDLIM2-208ENST00000416159 LPIN3Q9BQK8 851 aa18.93■□□□□ 0.62
PDLIM2-208ENST00000416159 KIAA1586Q9HCI6 787 aa18.93■□□□□ 0.62
PDLIM2-208ENST00000416159 SPATA6Q9NWH7 488 aaPredicted RBP18.93■□□□□ 0.62
PDLIM2-208ENST00000416159 GDAP2Q9NXN4 497 aa18.93■□□□□ 0.62
PDLIM2-208ENST00000416159 FAM13BQ9NYF5 915 aa18.93■□□□□ 0.62
PDLIM2-208ENST00000416159 PCDHB5Q9Y5E4 795 aa18.93■□□□□ 0.62
PDLIM2-208ENST00000416159 DPYSL4O14531 572 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 POLR2DO15514 142 aaKnown RBP18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 KRT19P08727 400 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 ATF6P18850 670 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 CDC25CP30307 473 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 ME1P48163 572 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 MYL7Q01449 175 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 BFSP1Q12934 665 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 NFE2Q16621 373 aaPredicted RBP18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 FAM26FQ5R3K3 315 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 GPR158Q5T848 1215 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 UNC13DQ70J99 1090 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 ARID3BQ8IVW6 561 aaPredicted RBP18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 GLIS3Q8NEA6 775 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 CXorf38Q8TB03 319 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 HPS3Q969F9 1004 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 ACBD6Q9BR61 282 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 INTS13Q9NVM9 706 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 OBP2AQ9NY56 170 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 ABI2Q9NYB9 513 aaPredicted RBP18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 FBXO4Q9UKT5 387 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 CFAP45Q9UL16 551 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 PCDHA7Q9UN72 937 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 L1RE1Q9UN81 338 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 COL4A3Q01955 1670 aa18.92■□□□□ 0.62
PDLIM2-208ENST00000416159 SHISA7A6NL88 538 aa18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 CHADO15335 359 aa18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 WEE1P30291 646 aa18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 MLLT6P55198 1093 aaPredicted RBP18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 SNRPFP62306 86 aaKnown RBP18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 ZNF528Q3MIS6 628 aa18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 STXBP5Q5T5C0 1151 aa18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 EPM2AIP1Q7L775 607 aaPredicted RBP18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 TOP6BLQ8N6T0 577 aa18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 GIPC2Q8TF65 315 aa18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 LEO1Q8WVC0 666 aaPredicted RBP18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 GCNAQ96QF7 691 aa18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 MKNK1Q9BUB5 465 aa18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 MTMR12Q9C0I1 747 aa18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 TASP1Q9H6P5 420 aa18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 DDX43Q9NXZ2 648 aaKnown RBP18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 HSPBP1Q9NZL4 362 aa18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 SIX4Q9UIU6 781 aa18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 ZMYM5Q9UJ78 669 aa18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 SNX9Q9Y5X1 595 aa18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 R4GN57 208 aa18.91■□□□□ 0.62
PDLIM2-208ENST00000416159 LMNAP02545 664 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 TNNC2P02585 160 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 HOXD13P35453 343 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 LHX1P48742 406 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 CDR1P51861 262 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 FCHO2Q0JRZ9 810 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 MYO1EQ12965 1108 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 FZD5Q13467 585 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 DUOXA2Q1HG44 320 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 INTS6LQ5JSJ4 861 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 RESP18Q5W5W9 173 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 DPH6Q7L8W6 267 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 CBWD2Q8IUF1 395 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 MAML2Q8IZL2 1156 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 ADSSL1Q8N142 457 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 CSGALNACT1Q8TDX6 532 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 FAM3CQ92520 227 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 RSPRY1Q96DX4 576 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 IL21Q9HBE4 155 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 TMLHEQ9NVH6 421 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 PIAS3Q9Y6X2 628 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 NCANO14594 1321 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 UBE4BO95155 1302 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 FANCMQ8IYD8 2048 aa18.9■□□□□ 0.62
PDLIM2-208ENST00000416159 PVALEFA0A1B0GWK0 134 aa18.89■□□□□ 0.61
PDLIM2-208ENST00000416159 PRPF40AO75400 957 aaKnown RBP18.89■□□□□ 0.61
PDLIM2-208ENST00000416159 PCSK1P29120 753 aa18.89■□□□□ 0.61
PDLIM2-208ENST00000416159 EHHADHQ08426 723 aa18.89■□□□□ 0.61
PDLIM2-208ENST00000416159 LMBRD2Q68DH5 695 aaPredicted RBP18.89■□□□□ 0.61
PDLIM2-208ENST00000416159 C1orf228Q6PIY5 440 aa18.89■□□□□ 0.61
PDLIM2-208ENST00000416159 MSANTD3Q96H12 275 aa18.89■□□□□ 0.61
PDLIM2-208ENST00000416159 FAM84AQ96KN4 292 aa18.89■□□□□ 0.61
PDLIM2-208ENST00000416159 PI4K2AQ9BTU6 479 aa18.89■□□□□ 0.61
PDLIM2-208ENST00000416159 C8orf33Q9H7E9 229 aaPredicted RBP18.89■□□□□ 0.61
PDLIM2-208ENST00000416159 ABCB6Q9NP58 842 aa18.89■□□□□ 0.61
PDLIM2-208ENST00000416159 RCOR1Q9UKL0 485 aa18.89■□□□□ 0.61
PDLIM2-208ENST00000416159 NDRG2Q9UN36 371 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms