RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 JOSD2Q8TAC2 188 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 MRRFQ96E11 262 aaKnown RBP10.42□□□□□ -0.74
SS18-203ENST00000415083 VCPIP1Q96JH7 1222 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 FAM81BQ96LP2 452 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 PORCNQ9H237 461 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 MYOZ2Q9NPC6 264 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 RBAKQ9NYW8 714 aaPredicted RBP10.42□□□□□ -0.74
SS18-203ENST00000415083 HAO1Q9UJM8 370 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 MAFBQ9Y5Q3 323 aaPredicted RBP10.42□□□□□ -0.74
SS18-203ENST00000415083 SPATA31C2B4DYI2 1134 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 POC1B-GALNT4F8VUJ3 575 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 PEX11AO75192 247 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 TMEM63AO94886 807 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 SSTR1P30872 391 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 YARSP54577 528 aaKnown RBP10.41□□□□□ -0.74
SS18-203ENST00000415083 HSF5Q4G112 596 aaPredicted RBP10.41□□□□□ -0.74
SS18-203ENST00000415083 RPAINQ86UA6 219 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 RDM1Q8NG50 284 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 CPT1BQ92523 772 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 BICD1Q96G01 975 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 PITPNM3Q9BZ71 974 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 TRABDQ9H4I3 376 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 JPH1Q9HDC5 661 aaPredicted RBP10.41□□□□□ -0.74
SS18-203ENST00000415083 CYP39A1Q9NYL5 469 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 EIF4E1BA6NMX2 242 aaKnown RBP10.41□□□□□ -0.74
SS18-203ENST00000415083 DIAPH2O60879 1101 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 CBX6O95503 412 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 PAX7P23759 505 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 SLC8A1P32418 973 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 LIG4P49917 911 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 POLGP54098 1239 aaPredicted RBP10.41□□□□□ -0.74
SS18-203ENST00000415083 CLNS1AP54105 237 aaKnown RBP10.41□□□□□ -0.74
SS18-203ENST00000415083 CAPSQ13938 189 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 PDK4Q16654 411 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 ZNF394Q53GI3 561 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 CYP4V2Q6ZWL3 525 aaPredicted RBP10.41□□□□□ -0.74
SS18-203ENST00000415083 MAB21L3Q8N8X9 362 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 RFWD2Q8NHY2 731 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 CGRRF1Q99675 332 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 SLC17A7Q9P2U7 560 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 PTPRFP10586 1907 aa10.41□□□□□ -0.74
SS18-203ENST00000415083 EXOC1LA0A1B0GW35 172 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 VCPP55072 806 aaKnown RBP10.4□□□□□ -0.74
SS18-203ENST00000415083 MYL6P60660 151 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 TFDP1Q14186 410 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 TAZQ16635 292 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 EFHC2Q5JST6 749 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 NBPF12Q5TAG4 269 aaPredicted RBP10.4□□□□□ -0.74
SS18-203ENST00000415083 PRAMEF18Q5VWM3 479 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 ZNF365Q70YC5 407 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 NAT8LQ8N9F0 302 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 DCAKDQ8WVC6 231 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 NKD2Q969F2 451 aaPredicted RBP10.4□□□□□ -0.74
SS18-203ENST00000415083 ERP27Q96DN0 273 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 KCNK13Q9HB14 408 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 SLC9A2Q9UBY0 812 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 CEP83Q9Y592 693 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 BRCA1P38398 1863 aaKnown RBP10.4□□□□□ -0.74
SS18-203ENST00000415083 MAP3K13O43283 966 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 ASS1P00966 412 aaKnown RBP10.4□□□□□ -0.74
SS18-203ENST00000415083 SUPT20HL2P0C7V6 817 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 EZRP15311 586 aaKnown RBP10.4□□□□□ -0.74
SS18-203ENST00000415083 ATF7P17544 494 aaPredicted RBP10.4□□□□□ -0.74
SS18-203ENST00000415083 CCND2P30279 289 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 GBP2P32456 591 aaPredicted RBP10.4□□□□□ -0.74
SS18-203ENST00000415083 PTPN7P35236 360 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 CCNG1P51959 295 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 NAA25Q14CX7 972 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 TARBP2Q15633 366 aaKnown RBP10.4□□□□□ -0.74
SS18-203ENST00000415083 SMTNL2Q2TAL5 461 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 SUPT20HL1Q3ZLR7 823 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 KCNT1Q5JUK3 1230 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 TRNP1Q6NT89 227 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 DENND1BQ6P3S1 775 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 ARHGEF18Q6ZSZ5 1173 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 ZBED8Q8IZ13 594 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 FAM13CQ8NE31 585 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 SUPT20HQ8NEM7 779 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 FLAD1Q8NFF5 587 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 MAIP1Q8WWC4 291 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 ZBTB10Q96DT7 871 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 XYLT2Q9H1B5 865 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 LRMDAQ9H2I8 198 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 PARVAQ9NVD7 372 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 ANKFY1Q9P2R3 1169 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 AFG3L2Q9Y4W6 797 aa10.4□□□□□ -0.74
SS18-203ENST00000415083 IGKV6D-21A0A0A0MT36 114 aa10.4□□□□□ -0.75
SS18-203ENST00000415083 UPP2O95045 317 aa10.4□□□□□ -0.75
SS18-203ENST00000415083 KRT1P04264 644 aa10.4□□□□□ -0.75
SS18-203ENST00000415083 ADRA1DP25100 572 aa10.4□□□□□ -0.75
SS18-203ENST00000415083 RFC1P35251 1148 aaPredicted RBP10.4□□□□□ -0.75
SS18-203ENST00000415083 SKIV2L2P42285 1042 aaKnown RBP10.4□□□□□ -0.75
SS18-203ENST00000415083 SLC18A1P54219 525 aa10.4□□□□□ -0.75
SS18-203ENST00000415083 STRN3Q13033 797 aa10.4□□□□□ -0.75
SS18-203ENST00000415083 NCOA4Q13772 614 aa10.4□□□□□ -0.75
SS18-203ENST00000415083 PTPN20Q4JDL3 420 aa10.4□□□□□ -0.75
SS18-203ENST00000415083 SNRNP48Q6IEG0 339 aaKnown RBP10.4□□□□□ -0.75
SS18-203ENST00000415083 RFWD3Q6PCD5 774 aa10.4□□□□□ -0.75
SS18-203ENST00000415083 BZW1Q7L1Q6 419 aaKnown RBP10.4□□□□□ -0.75
SS18-203ENST00000415083 UNC45BQ8IWX7 931 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms