RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 MRPL42Q9Y6G3 142 aaKnown RBP10.31□□□□□ -0.76
RIF1-202ENST00000414861 A8MXQ7 604 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 TMCO5BA8MYB1 307 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 ABL1P00519 1130 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 PAEPP09466 180 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 ODC1P11926 461 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 TNFAIP3P21580 790 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 ANXA13P27216 316 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 GNL1P36915 607 aaPredicted RBP10.31□□□□□ -0.76
RIF1-202ENST00000414861 BPIFB4P59827 614 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 PSMC1P62191 440 aaKnown RBP10.31□□□□□ -0.76
RIF1-202ENST00000414861 BTG3Q14201 252 aaPredicted RBP10.31□□□□□ -0.76
RIF1-202ENST00000414861 KIAA0319Q5VV43 1072 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 DPH6Q7L8W6 267 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 CMTR2Q8IYT2 770 aaKnown RBP10.31□□□□□ -0.76
RIF1-202ENST00000414861 TMEM175Q9BSA9 504 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 GPR62Q9BZJ7 368 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 SNX25Q9H3E2 840 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 FAM49BQ9NUQ9 324 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 ADAM28Q9UKQ2 775 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 FAN1Q9Y2M0 1017 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 PTPRDP23468 1912 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 ESPNB1AK53 854 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 ATP2C2O75185 946 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 CCDC175P0C221 793 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 TKTP29401 623 aaKnown RBP10.3□□□□□ -0.76
RIF1-202ENST00000414861 MAGEA10P43363 369 aaPredicted RBP10.3□□□□□ -0.76
RIF1-202ENST00000414861 C9orf50Q5SZB4 431 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 ALKBH5Q6P6C2 394 aaKnown RBP10.3□□□□□ -0.76
RIF1-202ENST00000414861 VPS36Q86VN1 386 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 UNC93AQ86WB7 457 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 NLRC5Q86WI3 1866 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 REXO1L1PQ8IX06 675 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 TTC39CQ8N584 583 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 PPP1R13BQ96KQ4 1090 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 B3GALT6Q96L58 329 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 HEXIM2Q96MH2 286 aaKnown RBP10.3□□□□□ -0.76
RIF1-202ENST00000414861 TRIM10Q9UDY6 481 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 PCDHA13Q9Y5I0 950 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 CDH23Q9H251 3354 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 CHD9Q3L8U1 2897 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 O00370 1275 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 ALDH2P05091 517 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 CYP11A1P05108 521 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 LINC00271P0C7V0 271 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 HTRA4P83105 476 aaPredicted RBP10.3□□□□□ -0.76
RIF1-202ENST00000414861 SPA17Q15506 151 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 CCDC122Q5T0U0 273 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 FUT10Q6P4F1 479 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 ZNF677Q86XU0 584 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 TMEM86AQ8N2M4 240 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 VN1R3Q9BXE9 311 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 LACRTQ9GZZ8 138 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 DDX43Q9NXZ2 648 aaKnown RBP10.3□□□□□ -0.76
RIF1-202ENST00000414861 PCDHB8Q9UN66 801 aa10.3□□□□□ -0.76
RIF1-202ENST00000414861 LCHNA4D1U4 455 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 TADA2AO75478 443 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 IPO7O95373 1038 aaKnown RBP10.29□□□□□ -0.76
RIF1-202ENST00000414861 CCDC130P13994 396 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 MSNP26038 577 aaKnown RBP10.29□□□□□ -0.76
RIF1-202ENST00000414861 ARHGAP25P42331 645 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 PPP1R26Q5T8A7 1209 aaPredicted RBP10.29□□□□□ -0.76
RIF1-202ENST00000414861 RASIP1Q5U651 963 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 HERC6Q8IVU3 1022 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 B3GALNT2Q8NCR0 500 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 OR10T2Q8NGX3 314 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 CYFIP2Q96F07 1278 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 COLEC11Q9BWP8 271 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 CRTAC1Q9NQ79 661 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.29□□□□□ -0.76
RIF1-202ENST00000414861 SLC4A7Q9Y6M7 1214 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 CYP1A1P04798 512 aaPredicted RBP10.29□□□□□ -0.76
RIF1-202ENST00000414861 VDRP11473 427 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 UNGP13051 313 aaPredicted RBP10.29□□□□□ -0.76
RIF1-202ENST00000414861 ATP2A2P16615 1042 aaKnown RBP10.29□□□□□ -0.76
RIF1-202ENST00000414861 TYMPP19971 482 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 MAGEA1P43355 309 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 ALDH7A1P49419 539 aaKnown RBP10.29□□□□□ -0.76
RIF1-202ENST00000414861 VAV2P52735 878 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 NOMO3P69849 1222 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 CLEC16AQ2KHT3 1053 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 SGO2Q562F6 1265 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 SPOUT1Q5T280 376 aaKnown RBP10.29□□□□□ -0.76
RIF1-202ENST00000414861 FAM171A1Q5VUB5 890 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 NAA35Q5VZE5 725 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 SMYD5Q6GMV2 418 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 FAM109BQ6ICB4 259 aaPredicted RBP10.29□□□□□ -0.76
RIF1-202ENST00000414861 OVOS1Q6IE37 1185 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 DENND1BQ6P3S1 775 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 KCNT2Q6UVM3 1135 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 CRYBG2Q8N1P7 616 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 C1orf131Q8NDD1 294 aaKnown RBP10.29□□□□□ -0.76
RIF1-202ENST00000414861 CPA5Q8WXQ8 436 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 TMEM209Q96SK2 561 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 KCND1Q9NSA2 647 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 DUSP10Q9Y6W6 482 aa10.29□□□□□ -0.76
RIF1-202ENST00000414861 PLXNA4Q9HCM2 1894 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 SF3B1O75533 1304 aaKnown RBP eCLIP10.28□□□□□ -0.762e-6■■■■□ 26.7
RIF1-202ENST00000414861 MICAL2O94851 1124 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 EFEMP2O95967 443 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms