RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 GPR17Q13304 367 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 ADCK5Q3MIX3 580 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 SPDYCQ5MJ68 293 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 ATF7IP2Q5U623 682 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 ALKAL1Q6UXT8 129 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 TOGARAM2Q6ZUX3 1019 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 KRT25Q7Z3Z0 450 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 NAXDQ8IW45 347 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 FRMD1Q8N878 549 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 CEP120Q8N960 986 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 MCPH1Q8NEM0 835 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 RIN3Q8TB24 985 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 PIP4K2CQ8TBX8 421 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 PIGOQ8TEQ8 1089 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 WHAMMQ8TF30 809 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 BSNDQ8WZ55 320 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 USP13Q92995 863 aaPredicted RBP17.21■□□□□ 0.35
CPNE1-208ENST00000414711 C18orf25Q96B23 403 aaPredicted RBP17.21■□□□□ 0.35
CPNE1-208ENST00000414711 LPIN3Q9BQK8 851 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 CCDC94Q9BW85 323 aaPredicted RBP17.21■□□□□ 0.35
CPNE1-208ENST00000414711 OXCT2Q9BYC2 517 aaPredicted RBP17.21■□□□□ 0.35
CPNE1-208ENST00000414711 KIF9Q9HAQ2 790 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 IL21Q9HBE4 155 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 POLMQ9NP87 494 aaPredicted RBP17.21■□□□□ 0.35
CPNE1-208ENST00000414711 DAXXQ9UER7 740 aaPredicted RBP17.21■□□□□ 0.35
CPNE1-208ENST00000414711 ZMYM5Q9UJ78 669 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 MMP17Q9ULZ9 603 aa17.21■□□□□ 0.35
CPNE1-208ENST00000414711 MTMR11A4FU01 709 aa17.2■□□□□ 0.34
CPNE1-208ENST00000414711 ARHGAP33O14559 1287 aa17.2■□□□□ 0.34
CPNE1-208ENST00000414711 OAZ2O95190 189 aa17.2■□□□□ 0.34
CPNE1-208ENST00000414711 GRM5P41594 1212 aa17.2■□□□□ 0.34
CPNE1-208ENST00000414711 SEC13P55735 322 aa17.2■□□□□ 0.34
CPNE1-208ENST00000414711 OSTNP61366 133 aa17.2■□□□□ 0.34
CPNE1-208ENST00000414711 CYP4F3Q08477 520 aa17.2■□□□□ 0.34
CPNE1-208ENST00000414711 SLC14A1Q13336 389 aa17.2■□□□□ 0.34
CPNE1-208ENST00000414711 NPY5RQ15761 445 aa17.2■□□□□ 0.34
CPNE1-208ENST00000414711 CRY1Q16526 586 aa17.2■□□□□ 0.34
CPNE1-208ENST00000414711 C2orf27AQ580R0 203 aa17.2■□□□□ 0.34
CPNE1-208ENST00000414711 RABEPKQ7Z6M1 372 aa17.2■□□□□ 0.34
CPNE1-208ENST00000414711 NEK8Q86SG6 692 aa17.2■□□□□ 0.34
CPNE1-208ENST00000414711 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
CPNE1-208ENST00000414711 ATAD1Q8NBU5 361 aa17.2■□□□□ 0.34
CPNE1-208ENST00000414711 DEPTORQ8TB45 409 aa17.2■□□□□ 0.34
CPNE1-208ENST00000414711 HSD17B14Q9BPX1 270 aa17.2■□□□□ 0.34
CPNE1-208ENST00000414711 ECT2Q9H8V3 914 aa17.2■□□□□ 0.34
CPNE1-208ENST00000414711 PTPRBP23467 1997 aa17.19■□□□□ 0.34
CPNE1-208ENST00000414711 OR6C75A6NL08 312 aa17.19■□□□□ 0.34
CPNE1-208ENST00000414711 CCNT1O60563 726 aaKnown RBP17.19■□□□□ 0.34
CPNE1-208ENST00000414711 KCNE1P15382 129 aa17.19■□□□□ 0.34
CPNE1-208ENST00000414711 IFNAR1P17181 557 aa17.19■□□□□ 0.34
CPNE1-208ENST00000414711 VEPH1Q14D04 833 aa17.19■□□□□ 0.34
CPNE1-208ENST00000414711 CCDC33Q8N5R6 958 aa17.19■□□□□ 0.34
CPNE1-208ENST00000414711 LSM14AQ8ND56 463 aaKnown RBP17.19■□□□□ 0.34
CPNE1-208ENST00000414711 DCBLD2Q96PD2 775 aa17.19■□□□□ 0.34
CPNE1-208ENST00000414711 ESYT1Q9BSJ8 1104 aa17.19■□□□□ 0.34
CPNE1-208ENST00000414711 TDP1Q9NUW8 608 aa17.19■□□□□ 0.34
CPNE1-208ENST00000414711 TIMM13Q9Y5L4 95 aaPredicted RBP17.19■□□□□ 0.34
CPNE1-208ENST00000414711 A0A087WWV3 80 aa17.18■□□□□ 0.34
CPNE1-208ENST00000414711 ARHGAP6O43182 974 aa17.18■□□□□ 0.34
CPNE1-208ENST00000414711 SYPP08247 313 aa17.18■□□□□ 0.34
CPNE1-208ENST00000414711 HNRNPLP14866 589 aaKnown RBP eCLIP17.18■□□□□ 0.34
CPNE1-208ENST00000414711 NAMPTP43490 491 aa17.18■□□□□ 0.34
CPNE1-208ENST00000414711 MAP7D1Q3KQU3 841 aa17.18■□□□□ 0.34
CPNE1-208ENST00000414711 NT5DC1Q5TFE4 455 aa17.18■□□□□ 0.34
CPNE1-208ENST00000414711 TMEM92Q6UXU6 159 aa17.18■□□□□ 0.34
CPNE1-208ENST00000414711 TMPRSS7Q7RTY8 843 aa17.18■□□□□ 0.34
CPNE1-208ENST00000414711 SLCO6A1Q86UG4 719 aa17.18■□□□□ 0.34
CPNE1-208ENST00000414711 SLFN12Q8IYM2 578 aa17.18■□□□□ 0.34
CPNE1-208ENST00000414711 MAB21L3Q8N8X9 362 aa17.18■□□□□ 0.34
CPNE1-208ENST00000414711 BRF1Q92994 677 aa17.18■□□□□ 0.34
CPNE1-208ENST00000414711 SEPT5Q99719 369 aaPredicted RBP17.18■□□□□ 0.34
CPNE1-208ENST00000414711 KIFC3Q9BVG8 833 aa17.18■□□□□ 0.34
CPNE1-208ENST00000414711 CNTN3Q9P232 1028 aa17.18■□□□□ 0.34
CPNE1-208ENST00000414711 BCCIPQ9P287 314 aaKnown RBP eCLIP17.18■□□□□ 0.345e-7■■■□□ 17.8
CPNE1-208ENST00000414711 PLXND1Q9Y4D7 1925 aa17.17■□□□□ 0.34
CPNE1-208ENST00000414711 M0QZQ0 153 aa17.17■□□□□ 0.34
CPNE1-208ENST00000414711 GJB3O75712 270 aa17.17■□□□□ 0.34
CPNE1-208ENST00000414711 LARGE1O95461 756 aa17.17■□□□□ 0.34
CPNE1-208ENST00000414711 ATP2B1P20020 1258 aa17.17■□□□□ 0.34
CPNE1-208ENST00000414711 MTF1Q14872 753 aa17.17■□□□□ 0.34
CPNE1-208ENST00000414711 GALNT17Q6IS24 598 aa17.17■□□□□ 0.34
CPNE1-208ENST00000414711 GLRX5Q86SX6 157 aa17.17■□□□□ 0.34
CPNE1-208ENST00000414711 USP37Q86T82 979 aa17.17■□□□□ 0.34
CPNE1-208ENST00000414711 ATP2A3Q93084 1043 aa17.17■□□□□ 0.34
CPNE1-208ENST00000414711 CDT1Q9H211 546 aa17.17■□□□□ 0.34
CPNE1-208ENST00000414711 HSFX1Q9UBD0 423 aa17.17■□□□□ 0.34
CPNE1-208ENST00000414711 ANTXRLA6NF34 631 aa17.16■□□□□ 0.34
CPNE1-208ENST00000414711 K7EQS6 105 aa17.16■□□□□ 0.34
CPNE1-208ENST00000414711 AP5Z1O43299 807 aa17.16■□□□□ 0.34
CPNE1-208ENST00000414711 ATF6P18850 670 aa17.16■□□□□ 0.34
CPNE1-208ENST00000414711 DDX6P26196 483 aaKnown RBP eCLIP17.16■□□□□ 0.349e-13■■■■□ 25.3
CPNE1-208ENST00000414711 NMT1P30419 496 aaKnown RBP17.16■□□□□ 0.34
CPNE1-208ENST00000414711 BYSLQ13895 437 aaKnown RBP17.16■□□□□ 0.34
CPNE1-208ENST00000414711 MYBPC2Q14324 1141 aa17.16■□□□□ 0.34
CPNE1-208ENST00000414711 NBR1Q14596 966 aa17.16■□□□□ 0.34
CPNE1-208ENST00000414711 TAF12Q16514 161 aa17.16■□□□□ 0.34
CPNE1-208ENST00000414711 ZNF568Q3ZCX4 644 aa17.16■□□□□ 0.34
CPNE1-208ENST00000414711 Q6ZUG5 572 aa17.16■□□□□ 0.34
CPNE1-208ENST00000414711 TRIM22Q8IYM9 498 aa17.16■□□□□ 0.34
CPNE1-208ENST00000414711 RASEFQ8IZ41 740 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms