RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 NASPP49321 788 aaPredicted RBP9□□□□□ -0.97
UPF3AP1-201ENST00000413731 ARPP19P56211 112 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 SRSF5Q13243 272 aaKnown RBP9□□□□□ -0.97
UPF3AP1-201ENST00000413731 GAS6Q14393 721 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 NT5DC1Q5TFE4 455 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 LAIR1Q6GTX8 287 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 SLC8B1Q6J4K2 584 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 VITQ6UXI7 678 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 PDZD4Q76G19 769 aaPredicted RBP9□□□□□ -0.97
UPF3AP1-201ENST00000413731 RTL10Q7L3V2 364 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 MAP4K3Q8IVH8 894 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 NETO1Q8TDF5 533 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 FAM3CQ92520 227 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 ZSWIM3Q96MP5 696 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 MMTAG2Q9BU76 263 aaKnown RBP9□□□□□ -0.97
UPF3AP1-201ENST00000413731 CYP4F11Q9HBI6 524 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 ZFP14Q9HCL3 533 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9□□□□□ -0.97
UPF3AP1-201ENST00000413731 FBXO2Q9UK22 296 aaPredicted RBP9□□□□□ -0.97
UPF3AP1-201ENST00000413731 RAB23Q9ULC3 237 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 NUP205Q92621 2012 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 ZFHX4Q86UP3 3567 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 CHURC1-FNTBB4DL54 471 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 PODXLO00592 558 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 MAN2B1O00754 1011 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 SPTLC2O15270 562 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 SLC26A4O43511 780 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 MOSPD3O75425 235 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 ABLIM3O94929 683 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 YEATS4O95619 227 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 CHRNB1P11230 501 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 GJA1P17302 382 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 PTPN2P17706 415 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 CYP11B2P19099 503 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 PLCG1P19174 1290 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 GDI1P31150 447 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 HOXC13P31276 330 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 ANP32AP39687 249 aaKnown RBP8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 VIPR2P41587 438 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 SCTRP47872 440 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 FNTBP49356 437 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 CCR3P51677 355 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 SLC39A14Q15043 492 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 KARSQ15046 597 aaKnown RBP8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 PPP2R5AQ15172 486 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 TMEM119Q4V9L6 283 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 WDR44Q5JSH3 913 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 HYIQ5T013 277 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 ATF7IP2Q5U623 682 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 THSD4Q6ZMP0 1018 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 PRR23CQ6ZRP0 262 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 VASH1Q7L8A9 365 aaPredicted RBP8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 KCNK18Q7Z418 384 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 TMEM130Q8N3G9 435 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 ZNF461Q8TAF7 563 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 IFT74Q96LB3 600 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 UROC1Q96N76 676 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 CLIC6Q96NY7 704 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 PNMA5Q96PV4 448 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 IER2Q9BTL4 223 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 RUSC1Q9BVN2 902 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 TRMT61BQ9BVS5 477 aaKnown RBP8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 CDT1Q9H211 546 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 LMAN1LQ9HAT1 526 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 POLD4Q9HCU8 107 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 ZNF334Q9HCZ1 680 aaPredicted RBP8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 SEMA4GQ9NTN9 838 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 RBM12Q9NTZ6 932 aaKnown RBP8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 CCDC39Q9UFE4 941 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 SERTAD1Q9UHV2 236 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 FBXL5Q9UKA1 691 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 ATP6V1DQ9Y5K8 247 aa8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 SRPRBQ9Y5M8 271 aaKnown RBP8.99□□□□□ -0.97
UPF3AP1-201ENST00000413731 FAM208BQ5VWN6 2430 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 SMIM28A0A1B0GU29 152 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 TMEM229AB2RXF0 380 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 ERVH48-1M5A8F1 160 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 ARNTLO00327 626 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 MEFVO15553 781 aaPredicted RBP8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 TRAPPC3O43617 180 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 GDF9O60383 454 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 HIP1RO75146 1068 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 S1PR4O95977 384 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 KRT18P05783 430 aaKnown RBP8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 RETP07949 1114 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 PLA2G4BP0C869 781 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 MYL4P12829 197 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 ATF2P15336 505 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 PSMC3P17980 439 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 CCNE1P24864 410 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 ELF1P32519 619 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 MAPK8P45983 427 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 SOX9P48436 509 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 NRLP54845 237 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 GDF10P55107 478 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 OSTNP61366 133 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 SH3BP2P78314 561 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 DNM1Q05193 864 aaKnown RBP8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 RAD51AP2Q09MP3 1159 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms