RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 FEZF2Q8TBJ5 459 aa18.3■□□□□ 0.52
PTPRC-206ENST00000413409 CALR3Q96L12 384 aaKnown RBP18.3■□□□□ 0.52
PTPRC-206ENST00000413409 TLR10Q9BXR5 811 aa18.3■□□□□ 0.52
PTPRC-206ENST00000413409 FTHL17Q9BXU8 183 aa18.3■□□□□ 0.52
PTPRC-206ENST00000413409 PARD6BQ9BYG5 372 aa18.3■□□□□ 0.52
PTPRC-206ENST00000413409 UBE2TQ9NPD8 197 aaPredicted RBP18.3■□□□□ 0.52
PTPRC-206ENST00000413409 GRID2IPA4D2P6 1211 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 BUB1O43683 1085 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 PALMO75781 387 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 ZRANB2O95218 330 aaKnown RBP eCLIP18.29■□□□□ 0.52
PTPRC-206ENST00000413409 LDHAP00338 332 aaKnown RBP18.29■□□□□ 0.52
PTPRC-206ENST00000413409 MFAP3P55082 362 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 NAP1L1P55209 391 aaKnown RBP18.29■□□□□ 0.52
PTPRC-206ENST00000413409 PPFIA1Q13136 1202 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 GRIK4Q16099 956 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 ARHGAP44Q17R89 818 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 RSPO4Q2I0M5 234 aaPredicted RBP18.29■□□□□ 0.52
PTPRC-206ENST00000413409 MEI1Q5TIA1 1274 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 ZPBP2Q6X784 338 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 C15orf39Q6ZRI6 1047 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 CREG2Q8IUH2 290 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 PSPC1Q8WXF1 523 aaKnown RBP18.29■□□□□ 0.52
PTPRC-206ENST00000413409 SHC3Q92529 594 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 RUBCNQ92622 972 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 NECTIN4Q96NY8 510 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 NT5C1BQ96P26 610 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 MMS19Q96T76 1030 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 TCF25Q9BQ70 676 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 CWH43Q9H720 699 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 ERVK-5Q9HDB9 667 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 ZNF446Q9NWS9 450 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 ATRXP46100 2492 aa18.29■□□□□ 0.52
PTPRC-206ENST00000413409 FNDC1Q4ZHG4 1894 aaPredicted RBP18.29■□□□□ 0.52
PTPRC-206ENST00000413409 TARSL2A2RTX5 802 aaKnown RBP18.28■□□□□ 0.52
PTPRC-206ENST00000413409 TBKBP1A7MCY6 615 aa18.28■□□□□ 0.52
PTPRC-206ENST00000413409 K7ERI5 159 aa18.28■□□□□ 0.52
PTPRC-206ENST00000413409 SRGAP2O75044 1071 aa18.28■□□□□ 0.52
PTPRC-206ENST00000413409 MXD4Q14582 209 aaPredicted RBP18.28■□□□□ 0.52
PTPRC-206ENST00000413409 PLCB4Q15147 1175 aa18.28■□□□□ 0.52
PTPRC-206ENST00000413409 CES5AQ6NT32 575 aa18.28■□□□□ 0.52
PTPRC-206ENST00000413409 CC2D1AQ6P1N0 951 aaPredicted RBP18.28■□□□□ 0.52
PTPRC-206ENST00000413409 FAM71AQ8IYT1 594 aa18.28■□□□□ 0.52
PTPRC-206ENST00000413409 NOA1Q8NC60 698 aaKnown RBP18.28■□□□□ 0.52
PTPRC-206ENST00000413409 HNRNPLLQ8WVV9 542 aaKnown RBP18.28■□□□□ 0.52
PTPRC-206ENST00000413409 GLG1Q92896 1179 aa18.28■□□□□ 0.52
PTPRC-206ENST00000413409 CCDC127Q96BQ5 260 aa18.28■□□□□ 0.52
PTPRC-206ENST00000413409 AGPAT1Q99943 283 aa18.28■□□□□ 0.52
PTPRC-206ENST00000413409 FAM213AQ9BRX8 229 aa18.28■□□□□ 0.52
PTPRC-206ENST00000413409 C2orf40Q9H1Z8 148 aa18.28■□□□□ 0.52
PTPRC-206ENST00000413409 SMARCAD1Q9H4L7 1026 aa18.28■□□□□ 0.52
PTPRC-206ENST00000413409 AAASQ9NRG9 546 aa18.28■□□□□ 0.52
PTPRC-206ENST00000413409 RAB20Q9NX57 234 aa18.28■□□□□ 0.52
PTPRC-206ENST00000413409 OGFRQ9NZT2 677 aa18.28■□□□□ 0.52
PTPRC-206ENST00000413409 AGO2Q9UKV8 859 aaKnown RBP18.28■□□□□ 0.52
PTPRC-206ENST00000413409 LRFN2Q9ULH4 789 aa18.28■□□□□ 0.52
PTPRC-206ENST00000413409 HCFC2Q9Y5Z7 792 aa18.28■□□□□ 0.52
PTPRC-206ENST00000413409 A0A0B4J269 797 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 FOXN3O00409 490 aaPredicted RBP18.27■□□□□ 0.52
PTPRC-206ENST00000413409 MGEA5O60502 916 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 LRRN2O75325 713 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 TNFAIP3P21580 790 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 MCM3P25205 808 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 GCNT1Q02742 428 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 TMEM62Q0P6H9 643 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 SMYD5Q6GMV2 418 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 WDR93Q6P2C0 686 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 GLYCTKQ8IVS8 523 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 C12orf76Q8N812 135 aaPredicted RBP18.27■□□□□ 0.52
PTPRC-206ENST00000413409 LRRC57Q8N9N7 239 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 TDRD5Q8NAT2 981 aaKnown RBP18.27■□□□□ 0.52
PTPRC-206ENST00000413409 RFFLQ8WZ73 363 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 CASP10Q92851 521 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 SEMA4DQ92854 862 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 CAPZA3Q96KX2 299 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 KREMEN1Q96MU8 473 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 RTP3Q9BQQ7 232 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 CCDC113Q9H0I3 377 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 FAM49AQ9H0Q0 323 aaPredicted RBP18.27■□□□□ 0.52
PTPRC-206ENST00000413409 ENTPD7Q9NQZ7 604 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 FAM53CQ9NYF3 392 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 LZTS1Q9Y250 596 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 SQORQ9Y6N5 450 aa18.27■□□□□ 0.52
PTPRC-206ENST00000413409 ZBTB42B2RXF5 422 aa18.26■□□□□ 0.51
PTPRC-206ENST00000413409 PDE2AO00408 941 aaPredicted RBP18.26■□□□□ 0.51
PTPRC-206ENST00000413409 HBP1O60381 514 aa18.26■□□□□ 0.51
PTPRC-206ENST00000413409 ERLIN1O75477 346 aa18.26■□□□□ 0.51
PTPRC-206ENST00000413409 MARK3P27448 753 aa18.26■□□□□ 0.51
PTPRC-206ENST00000413409 PLCB3Q01970 1234 aa18.26■□□□□ 0.51
PTPRC-206ENST00000413409 TCEAL1Q15170 157 aa18.26■□□□□ 0.51
PTPRC-206ENST00000413409 SV2AQ7L0J3 742 aa18.26■□□□□ 0.51
PTPRC-206ENST00000413409 SLFN11Q7Z7L1 901 aa18.26■□□□□ 0.51
PTPRC-206ENST00000413409 ZBTB8OSQ8IWT0 167 aa18.26■□□□□ 0.51
PTPRC-206ENST00000413409 SYCE1Q8N0S2 351 aa18.26■□□□□ 0.51
PTPRC-206ENST00000413409 MMGT1Q8N4V1 131 aa18.26■□□□□ 0.51
PTPRC-206ENST00000413409 TPCN2Q8NHX9 752 aa18.26■□□□□ 0.51
PTPRC-206ENST00000413409 HELQQ8TDG4 1101 aa18.26■□□□□ 0.51
PTPRC-206ENST00000413409 TAS1R2Q8TE23 839 aa18.26■□□□□ 0.51
PTPRC-206ENST00000413409 RIN2Q8WYP3 895 aaPredicted RBP18.26■□□□□ 0.51
PTPRC-206ENST00000413409 MSTO1Q9BUK6 570 aa18.26■□□□□ 0.51
PTPRC-206ENST00000413409 ARFGAP3Q9NP61 516 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms