RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 PTPRHQ9HD43 1115 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 KCNQ5Q9NR82 932 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 BABAM1Q9NWV8 329 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 SAMD15Q9P1V8 674 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 PRKAG3Q9UGI9 489 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 TMEM59LQ9UK28 342 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 PNMA3Q9UL41 463 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 ANGPTL3Q9Y5C1 460 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 MYH11P35749 1972 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 ATAD5Q96QE3 1844 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 WDR19Q8NEZ3 1342 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 SLIT1O75093 1534 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.48□□□□□ -1.53
HERC4-205ENST00000412272 TLR3O15455 904 aaKnown RBP5.48□□□□□ -1.53
HERC4-205ENST00000412272 ADCY6O43306 1168 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 GABBR2O75899 941 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 TOMM70O94826 608 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 KRT13P13646 458 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 ECE1P42892 770 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 EIF3BP55884 814 aaKnown RBP5.48□□□□□ -1.53
HERC4-205ENST00000412272 GNG2P59768 71 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 SSTP61278 116 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 OLR1P78380 273 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 CCDC25Q86WR0 208 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 FBXL6Q8N531 539 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 SPATA18Q8TC71 538 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 TP53INP1Q96A56 240 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 SYTL2Q9HCH5 934 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 KIAA1586Q9HCI6 787 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 ECHDC1Q9NTX5 307 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 COL4A3BPQ9Y5P4 624 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 KIF13BQ9NQT8 1826 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 A0A087WZG4 1122 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 C1orf232A0A0U1RR37 186 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 SMIM23A6NLE4 172 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 DKC1O60832 514 aaKnown RBP eCLIP5.48□□□□□ -1.53
HERC4-205ENST00000412272 TRMUO75648 421 aaKnown RBP5.48□□□□□ -1.53
HERC4-205ENST00000412272 ITGB3P05106 788 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 PBLDP30039 288 aaPredicted RBP5.48□□□□□ -1.53
HERC4-205ENST00000412272 ECHS1P30084 290 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 BMPR1AP36894 532 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 CD86P42081 329 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 MMP13P45452 471 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 HARS2P49590 506 aaKnown RBP5.48□□□□□ -1.53
HERC4-205ENST00000412272 ENTPD1P49961 510 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 COPB1P53618 953 aaKnown RBP5.48□□□□□ -1.53
HERC4-205ENST00000412272 TGFB2P61812 414 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 RPP38P78345 283 aaKnown RBP5.48□□□□□ -1.53
HERC4-205ENST00000412272 UBXN1Q04323 297 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 ZNF844Q08AG5 666 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 FAPQ12884 760 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 MOGSQ13724 837 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 ZNF792Q3KQV3 632 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 CCDC36Q8IYA8 594 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 OR6C4Q8NGE1 309 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 ZNF606Q8WXB4 792 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 HSPH1Q92598 858 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 MARC2Q969Z3 335 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 C9orf16Q9BUW7 83 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 ISCUQ9H1K1 167 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 LRMDAQ9H2I8 198 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 PPCSQ9HAB8 311 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 LIN7BQ9HAP6 207 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 SACM1LQ9NTJ5 587 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 GPRC5DQ9NZD1 345 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 CEP72Q9P209 647 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 VWA7Q9Y334 891 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 PCDHGA10Q9Y5H3 936 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 MAGED1Q9Y5V3 778 aaPredicted RBP5.48□□□□□ -1.53
HERC4-205ENST00000412272 PNPLA7Q6ZV29 1317 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 A8MU76 341 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 PJA2O43164 708 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 NDUFS6O75380 124 aaKnown RBP5.48□□□□□ -1.53
HERC4-205ENST00000412272 EYA4O95677 639 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 SMIM18P0DKX4 95 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 FDPSP14324 419 aaKnown RBP5.48□□□□□ -1.53
HERC4-205ENST00000412272 CPB1P15086 417 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 SOX11P35716 441 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 STT3AP46977 705 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 ARFIP1P53367 373 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 VBP1P61758 197 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 MLLT1Q03111 559 aaPredicted RBP5.48□□□□□ -1.53
HERC4-205ENST00000412272 SPAG1Q07617 926 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 STK4Q13043 487 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 EDRF1Q3B7T1 1238 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 LSM12Q3MHD2 195 aaKnown RBP5.48□□□□□ -1.53
HERC4-205ENST00000412272 PPP1R26Q5T8A7 1209 aaPredicted RBP5.48□□□□□ -1.53
HERC4-205ENST00000412272 RNF43Q68DV7 783 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 IQSEC1Q6DN90 963 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 LRRC74BQ6ZQY2 392 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 REXO1Q8N1G1 1221 aaKnown RBP5.48□□□□□ -1.53
HERC4-205ENST00000412272 ANKLE1Q8NAG6 615 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 LRRC8CQ8TDW0 803 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 LPGAT1Q92604 370 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 ERLEC1Q96DZ1 483 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 RPRD1AQ96P16 312 aaPredicted RBP5.48□□□□□ -1.53
HERC4-205ENST00000412272 C19orf43Q9BQ61 176 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 HINFPQ9BQA5 517 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 TMEM109Q9BVC6 243 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 CCDC106Q9BWC9 280 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms