RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 MYCP01106 439 aaPredicted RBP14.37□□□□□ -0.11
LIMS1-205ENST00000410093 HMGCRP04035 888 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 GRK4P32298 578 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 ADCYAP1R1P41586 468 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 GRM5P41594 1212 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 GYS2P54840 703 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 SNX16P57768 344 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 RBP5P82980 135 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 PTK6Q13882 451 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 TMEM132DQ14C87 1099 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 PPP1R7Q15435 360 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 TRADDQ15628 312 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 CEP85LQ5SZL2 805 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 EEF1DP3Q658K8 133 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 DCUN1D2Q6PH85 259 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 DDX42Q86XP3 938 aaKnown RBP eCLIP14.37□□□□□ -0.11
LIMS1-205ENST00000410093 SH3TC2Q8TF17 1288 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 UBLCP1Q8WVY7 318 aaPredicted RBP14.37□□□□□ -0.11
LIMS1-205ENST00000410093 ART4Q93070 314 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 ZNF333Q96JL9 665 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 FDXACB1Q9BRP7 624 aaPredicted RBP14.37□□□□□ -0.11
LIMS1-205ENST00000410093 STMN4Q9H169 189 aaPredicted RBP14.37□□□□□ -0.11
LIMS1-205ENST00000410093 DPH5Q9H2P9 285 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 MINDY3Q9H8M7 445 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 Q9Y3F1 56 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 NFS1Q9Y697 457 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 A6NJR5 290 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 SIGLEC16A6NMB1 481 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 B4GALT5O43286 388 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 TJP3O95049 919 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 CXCL8P10145 99 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 VDRP11473 427 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 RARGP13631 454 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 ARF4P18085 180 aaPredicted RBP14.36□□□□□ -0.11
LIMS1-205ENST00000410093 PMS2P54278 862 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 IGBP1P78318 339 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 PRKCZQ05513 592 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 MYO1EQ12965 1108 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 KLF1Q13351 362 aaPredicted RBP14.36□□□□□ -0.11
LIMS1-205ENST00000410093 ZNF268Q14587 947 aaPredicted RBP14.36□□□□□ -0.11
LIMS1-205ENST00000410093 ZSCAN26Q16670 478 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 ODF2Q5BJF6 829 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 TTMPQ5BVD1 217 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 PPP1R15BQ5SWA1 713 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 TRMT10CQ7L0Y3 403 aaKnown RBP14.36□□□□□ -0.11
LIMS1-205ENST00000410093 ADAT2Q7Z6V5 191 aaKnown RBP14.36□□□□□ -0.11
LIMS1-205ENST00000410093 PASD1Q8IV76 773 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 CCDC89Q8N998 374 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 NLRP7Q8WX94 980 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 NCAPGQ9BPX3 1015 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 TRIM51Q9BSJ1 452 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 TMEM109Q9BVC6 243 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 GCOM2Q9BZD3 368 aaPredicted RBP14.36□□□□□ -0.11
LIMS1-205ENST00000410093 OSBPL8Q9BZF1 889 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 SMIM35A0A1B0GVV1 85 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 TSPAN1O60635 241 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 KRT14P02533 472 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 KRT19P08727 400 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 KRT7P08729 469 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 SMPD1P17405 629 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 CD58P19256 250 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 CTGFP29279 349 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 INCA1Q0VD86 236 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 UAP1Q16222 522 aaPredicted RBP14.36□□□□□ -0.11
LIMS1-205ENST00000410093 CNGA2Q16280 664 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 WDR72Q3MJ13 1102 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 DENND2CQ68D51 928 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 TTC27Q6P3X3 843 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 C1orf127Q8N9H9 656 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 SLAIN1Q8ND83 568 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 SNF8Q96H20 258 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 TMEM176AQ96HP8 235 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 DCLK3Q9C098 648 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 NEUROG2Q9H2A3 272 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 GRHL1Q9NZI5 618 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 CHORDC1Q9UHD1 332 aaPredicted RBP14.36□□□□□ -0.11
LIMS1-205ENST00000410093 SIX4Q9UIU6 781 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 SNX24Q9Y343 169 aa14.36□□□□□ -0.11
LIMS1-205ENST00000410093 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.36□□□□□ -0.11
LIMS1-205ENST00000410093 CILPO75339 1184 aa14.35□□□□□ -0.11
LIMS1-205ENST00000410093 IQCF3P0C7M6 154 aa14.35□□□□□ -0.11
LIMS1-205ENST00000410093 NR1D1P20393 614 aa14.35□□□□□ -0.11
LIMS1-205ENST00000410093 BRD2P25440 801 aaKnown RBP14.35□□□□□ -0.11
LIMS1-205ENST00000410093 RPL21P46778 160 aaKnown RBP14.35□□□□□ -0.11
LIMS1-205ENST00000410093 GABRB2P47870 512 aa14.35□□□□□ -0.11
LIMS1-205ENST00000410093 FLT3LGP49771 235 aa14.35□□□□□ -0.11
LIMS1-205ENST00000410093 RAD23BP54727 409 aa14.35□□□□□ -0.11
LIMS1-205ENST00000410093 PLTPP55058 493 aa14.35□□□□□ -0.11
LIMS1-205ENST00000410093 ADCY2Q08462 1091 aa14.35□□□□□ -0.11
LIMS1-205ENST00000410093 ZNF844Q08AG5 666 aa14.35□□□□□ -0.11
LIMS1-205ENST00000410093 IFFO1Q0D2I5 559 aa14.35□□□□□ -0.11
LIMS1-205ENST00000410093 HADHQ16836 314 aaKnown RBP14.35□□□□□ -0.11
LIMS1-205ENST00000410093 SLC10A6Q3KNW5 377 aa14.35□□□□□ -0.11
LIMS1-205ENST00000410093 JADE1Q6IE81 842 aa14.35□□□□□ -0.11
LIMS1-205ENST00000410093 AADACL2Q6P093 401 aa14.35□□□□□ -0.11
LIMS1-205ENST00000410093 ZDHHC24Q6UX98 284 aa14.35□□□□□ -0.11
LIMS1-205ENST00000410093 CCDC50Q8IVM0 306 aa14.35□□□□□ -0.11
LIMS1-205ENST00000410093 KIAA0319LQ8IZA0 1049 aa14.35□□□□□ -0.11
LIMS1-205ENST00000410093 ZDHHC14Q8IZN3 488 aa14.35□□□□□ -0.11
LIMS1-205ENST00000410093 ARL8AQ96BM9 186 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms