RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 CCDC22O60826 627 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 RALBP11234 206 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 MAP4P27816 1152 aaKnown RBP9.5□□□□□ -0.89
PBRM1-208ENST00000410007 AKT1P31749 480 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 BCAT1P54687 386 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 CYP24A1Q07973 514 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 PDAP1Q13442 181 aaKnown RBP9.5□□□□□ -0.89
PBRM1-208ENST00000410007 MAPRE2Q15555 327 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 NFE2Q16621 373 aaPredicted RBP9.5□□□□□ -0.89
PBRM1-208ENST00000410007 BEND6Q5SZJ8 279 aaPredicted RBP9.5□□□□□ -0.89
PBRM1-208ENST00000410007 TEDDM1Q5T9Z0 273 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 SDE2Q6IQ49 451 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 JAMLQ86YT9 394 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 MFN1Q8IWA4 741 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 CDCA5Q96FF9 252 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 TRIM51Q9BSJ1 452 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 SUDS3Q9H7L9 328 aaPredicted RBP9.5□□□□□ -0.89
PBRM1-208ENST00000410007 MLXIPLQ9NP71 852 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 KRT82Q9NSB4 513 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 LMNAP02545 664 aaKnown RBP9.5□□□□□ -0.89
PBRM1-208ENST00000410007 KITP10721 976 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 MCF2P10911 925 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 GZMAP12544 262 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 YY1P25490 414 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 HSPA9P38646 679 aaKnown RBP9.5□□□□□ -0.89
PBRM1-208ENST00000410007 TWF1Q12792 350 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 EFTUD2Q15029 972 aaKnown RBP eCLIP9.5□□□□□ -0.89
PBRM1-208ENST00000410007 SYTL3Q4VX76 610 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 CYP4A22Q5TCH4 519 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 ADGRF2Q8IZF7 708 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 TTC30BQ8N4P2 665 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 SPIRE2Q8WWL2 714 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 MRPS31Q92665 395 aaKnown RBP9.5□□□□□ -0.89
PBRM1-208ENST00000410007 FRMD8P1Q9BZ68 369 aaPredicted RBP9.5□□□□□ -0.89
PBRM1-208ENST00000410007 WDCPQ9H6R7 721 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 DCTN4Q9UJW0 460 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 M0QYT0 321 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 PSTPIP1O43586 416 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 FBXO21O94952 628 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 URODP06132 367 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 POLBP06746 335 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 KCNA2P16389 499 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 STIP1P31948 543 aaKnown RBP9.5□□□□□ -0.89
PBRM1-208ENST00000410007 SPRP35270 261 aaPredicted RBP9.5□□□□□ -0.89
PBRM1-208ENST00000410007 INHBEP58166 350 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 VSNL1P62760 191 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 CAPRIN1Q14444 709 aaKnown RBP9.5□□□□□ -0.89
PBRM1-208ENST00000410007 GRIK4Q16099 956 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 SLC30A10Q6XR72 485 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 ACOT1Q86TX2 421 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 ATXN7L3BQ96GX2 97 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 SLC4A9Q96Q91 983 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 KANSL3Q9P2N6 904 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 PCDHGB4Q9UN71 923 aa9.5□□□□□ -0.89
PBRM1-208ENST00000410007 GTPBP10A4D1E9 387 aaKnown RBP9.49□□□□□ -0.89
PBRM1-208ENST00000410007 C2CD2LO14523 706 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 PYGLP06737 847 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 ADORA2AP29274 412 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 MAP2K2P36507 400 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 CASP4P49662 377 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 RARRES1P49788 294 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 SMAD1Q15797 465 aaKnown RBP9.49□□□□□ -0.89
PBRM1-208ENST00000410007 RASIP1Q5U651 963 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 PGBD3Q8N328 593 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 REPS2Q8NFH8 660 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 SLC5A5Q92911 643 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 USP13Q92995 863 aaPredicted RBP9.49□□□□□ -0.89
PBRM1-208ENST00000410007 FAM129AQ9BZQ8 928 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 WWP1Q9H0M0 922 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.49□□□□□ -0.89
PBRM1-208ENST00000410007 PSMC3IPQ9P2W1 217 aaPredicted RBP9.49□□□□□ -0.89
PBRM1-208ENST00000410007 MROH1Q8NDA8 1641 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 SPAG7O75391 227 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 TRPA1O75762 1119 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 ANXA9O76027 345 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 ZNF200P98182 395 aaPredicted RBP9.49□□□□□ -0.89
PBRM1-208ENST00000410007 PPIL2Q13356 520 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 SMTNL2Q2TAL5 461 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 ZNF280DQ6N043 979 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 LRIG3Q6UXM1 1119 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 LINC00523Q86TU6 105 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 DDIASQ8IXT1 998 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 USP38Q8NB14 1042 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 OSMRQ99650 979 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 SETD4Q9NVD3 440 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 CPSF2Q9P2I0 782 aaKnown RBP9.49□□□□□ -0.89
PBRM1-208ENST00000410007 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.49□□□□□ -0.89
PBRM1-208ENST00000410007 ZNF263O14978 683 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 LSM8O95777 96 aaKnown RBP9.49□□□□□ -0.89
PBRM1-208ENST00000410007 PTPRAP18433 802 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 RGS4P49798 205 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 ERVK-9P63128 1117 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 ERVK-24P63145 666 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 ZNF177Q13360 481 aaPredicted RBP9.49□□□□□ -0.89
PBRM1-208ENST00000410007 USP10Q14694 798 aaKnown RBP9.49□□□□□ -0.89
PBRM1-208ENST00000410007 RBBP7Q16576 425 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 LY6KQ17RY6 165 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 CTXN3Q4LDR2 81 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 FBXO32Q969P5 355 aa9.49□□□□□ -0.89
PBRM1-208ENST00000410007 MKL1Q969V6 931 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms