RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 NUP85Q9BW27 656 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 ADAM22Q9P0K1 906 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 LRFN2Q9ULH4 789 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 JRKLQ9Y4A0 524 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 HYOU1Q9Y4L1 999 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 CEP83Q9Y592 693 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 ATP8B3O60423 1300 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 TET1Q8NFU7 2136 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 A0A0A6YYK5 440 aaPredicted RBP13.23□□□□□ -0.29
CHMP3-204ENST00000409727 F8W810 466 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 M0QYV0 167 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 MICAL2O94851 1124 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 VDRP11473 427 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 RRM1P23921 792 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 ACAT1P24752 427 aaKnown RBP13.23□□□□□ -0.29
CHMP3-204ENST00000409727 GATMP50440 423 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 TUSC3Q13454 348 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 IFI16Q16666 785 aaKnown RBP13.23□□□□□ -0.29
CHMP3-204ENST00000409727 NOMO2Q5JPE7 1267 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 C1orf53Q5VUE5 145 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 MON1BQ7L1V2 547 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 ZNF280BQ86YH2 543 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 ABI1Q8IZP0 508 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 TTC39CQ8N584 583 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 TMEM35BQ8NCS4 154 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 UBA3Q8TBC4 463 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 URGCPQ8TCY9 931 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 APBB2Q92870 758 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 BTBD6Q96KE9 485 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 SENP8Q96LD8 212 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 TMEM161AQ9NX61 479 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 TBX21Q9UL17 535 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 PCDHGC3Q9UN70 934 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 PCDHGC5Q9Y5F6 944 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 TDRD15B5MCY1 1934 aaKnown RBP13.22□□□□□ -0.29
CHMP3-204ENST00000409727 TANC1Q9C0D5 1861 aa13.22□□□□□ -0.29
CHMP3-204ENST00000409727 B4GALT3O60512 393 aa13.22□□□□□ -0.29
CHMP3-204ENST00000409727 BUB1BO60566 1050 aaPredicted RBP13.22□□□□□ -0.29
CHMP3-204ENST00000409727 RPL9P32969 192 aaKnown RBP13.22□□□□□ -0.29
CHMP3-204ENST00000409727 PSMC1P62191 440 aaKnown RBP13.22□□□□□ -0.29
CHMP3-204ENST00000409727 PPP1R26Q5T8A7 1209 aaPredicted RBP13.22□□□□□ -0.29
CHMP3-204ENST00000409727 NECAB2Q7Z6G3 386 aa13.22□□□□□ -0.29
CHMP3-204ENST00000409727 OSTM1Q86WC4 334 aa13.22□□□□□ -0.29
CHMP3-204ENST00000409727 RHOT2Q8IXI1 618 aa13.22□□□□□ -0.29
CHMP3-204ENST00000409727 WDTC1Q8N5D0 677 aa13.22□□□□□ -0.29
CHMP3-204ENST00000409727 GTF3C4Q9UKN8 822 aa13.22□□□□□ -0.29
CHMP3-204ENST00000409727 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.22□□□□□ -0.29
CHMP3-204ENST00000409727 MYH10P35580 1976 aa13.22□□□□□ -0.29
CHMP3-204ENST00000409727 KIAA0100Q14667 2235 aaKnown RBP13.22□□□□□ -0.29
CHMP3-204ENST00000409727 MKI67P46013 3256 aaKnown RBP13.22□□□□□ -0.29
CHMP3-204ENST00000409727 O00370 1275 aa13.21□□□□□ -0.29
CHMP3-204ENST00000409727 DDHD2O94830 711 aa13.21□□□□□ -0.29
CHMP3-204ENST00000409727 GJB6O95452 261 aa13.21□□□□□ -0.29
CHMP3-204ENST00000409727 LSM8O95777 96 aaKnown RBP13.21□□□□□ -0.29
CHMP3-204ENST00000409727 CYP1A2P05177 515 aa13.21□□□□□ -0.29
CHMP3-204ENST00000409727 ITGB1P05556 798 aa13.21□□□□□ -0.29
CHMP3-204ENST00000409727 CXCR5P32302 372 aa13.21□□□□□ -0.29
CHMP3-204ENST00000409727 BRCC3P46736 316 aa13.21□□□□□ -0.29
CHMP3-204ENST00000409727 GOLGA7BQ2TAP0 167 aa13.21□□□□□ -0.29
CHMP3-204ENST00000409727 TIGD5Q53EQ6 642 aa13.21□□□□□ -0.29
CHMP3-204ENST00000409727 CYP4A22Q5TCH4 519 aa13.21□□□□□ -0.29
CHMP3-204ENST00000409727 TOP6BLQ8N6T0 577 aa13.21□□□□□ -0.29
CHMP3-204ENST00000409727 ZNF564Q8TBZ8 553 aaPredicted RBP13.21□□□□□ -0.29
CHMP3-204ENST00000409727 CAPZA3Q96KX2 299 aa13.21□□□□□ -0.29
CHMP3-204ENST00000409727 FAM193BQ96PV7 902 aaPredicted RBP13.21□□□□□ -0.29
CHMP3-204ENST00000409727 TBC1D13Q9NVG8 400 aa13.21□□□□□ -0.29
CHMP3-204ENST00000409727 CYTH4Q9UIA0 394 aa13.21□□□□□ -0.29
CHMP3-204ENST00000409727 TSPAN16Q9UKR8 245 aa13.21□□□□□ -0.29
CHMP3-204ENST00000409727 STXBP5LQ9Y2K9 1186 aa13.21□□□□□ -0.29
CHMP3-204ENST00000409727 MRFAP1Q9Y605 127 aa13.21□□□□□ -0.29
CHMP3-204ENST00000409727 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.21□□□□□ -0.3
CHMP3-204ENST00000409727 PIK3R2O00459 728 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 ZNF185O15231 689 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 ATP2C2O75185 946 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 UPP2O95045 317 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 KIF4AO95239 1232 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 CXCL10P02778 98 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 CCDC130P13994 396 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 ITGB8P26012 769 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 ADORA2BP29275 332 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 OR1G1P47890 313 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 MESDQ14696 234 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 CNGA2Q16280 664 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 CCDC142Q17RM4 750 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 LIN9Q5TKA1 542 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 PEX26Q7Z412 305 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 UNC93AQ86WB7 457 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 ERICH1Q86X53 443 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 PHF13Q86YI8 300 aaPredicted RBP13.21□□□□□ -0.3
CHMP3-204ENST00000409727 LRRC57Q8N9N7 239 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 LRRN4CLQ8ND94 238 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 TRIM11Q96F44 468 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 DDX27Q96GQ7 796 aaKnown RBP13.21□□□□□ -0.3
CHMP3-204ENST00000409727 MCOLN1Q9GZU1 580 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 L2HGDHQ9H9P8 463 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 TJP2Q9UDY2 1190 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 DNAJB4Q9UDY4 337 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 SAR1BQ9Y6B6 198 aa13.21□□□□□ -0.3
CHMP3-204ENST00000409727 TRIM43BA6NCK2 446 aa13.2□□□□□ -0.3
CHMP3-204ENST00000409727 MYBL1P10243 752 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms