RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 DPEP3Q9H4B8 488 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 INPP5FQ9Y2H2 1132 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 TSC2P49815 1807 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 TMEM110-MUSTN1A8MSY1 372 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 M0QYV0 167 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 KIF4AO95239 1232 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 TCP1P17987 556 aaKnown RBP14.93□□□□□ -0.02
GPNMB-203ENST00000409458 GRIK3Q13003 919 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 RPS6KA1Q15418 735 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 TRIM60Q495X7 471 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 SGO2Q562F6 1265 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 LIN9Q5TKA1 542 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 SLC24A5Q71RS6 500 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 DPH6Q7L8W6 267 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 ANKRD33Q7Z3H0 272 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 CREG2Q8IUH2 290 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 CEP112Q8N8E3 955 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 C3orf58Q8NDZ4 430 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 APPL2Q8NEU8 664 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 RABGGTAQ92696 567 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 ARMC5Q96C12 935 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 ZNF518BQ9C0D4 1074 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 LHX5Q9H2C1 402 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 UBN1Q9NPG3 1134 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 CYTH4Q9UIA0 394 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 CEP83Q9Y592 693 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 INPPL1O15357 1258 aa14.92□□□□□ -0.02
GPNMB-203ENST00000409458 TCTN1Q2MV58 587 aa14.92□□□□□ -0.02
GPNMB-203ENST00000409458 PLEKHG4Q58EX7 1191 aa14.92□□□□□ -0.02
GPNMB-203ENST00000409458 ACOT1Q86TX2 421 aa14.92□□□□□ -0.02
GPNMB-203ENST00000409458 UNC93AQ86WB7 457 aa14.92□□□□□ -0.02
GPNMB-203ENST00000409458 OSTM1Q86WC4 334 aa14.92□□□□□ -0.02
GPNMB-203ENST00000409458 ADGRF2Q8IZF7 708 aa14.92□□□□□ -0.02
GPNMB-203ENST00000409458 PDCL2Q8N4E4 241 aa14.92□□□□□ -0.02
GPNMB-203ENST00000409458 TOP6BLQ8N6T0 577 aa14.92□□□□□ -0.02
GPNMB-203ENST00000409458 C12orf29Q8N999 325 aa14.92□□□□□ -0.02
GPNMB-203ENST00000409458 VCPIP1Q96JH7 1222 aa14.92□□□□□ -0.02
GPNMB-203ENST00000409458 PAAF1Q9BRP4 392 aa14.92□□□□□ -0.02
GPNMB-203ENST00000409458 FTHL17Q9BXU8 183 aa14.92□□□□□ -0.02
GPNMB-203ENST00000409458 AMFRQ9UKV5 643 aa14.92□□□□□ -0.02
GPNMB-203ENST00000409458 A8MXQ7 604 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 PDE2AO00408 941 aaPredicted RBP14.91□□□□□ -0.02
GPNMB-203ENST00000409458 HUS1O60921 280 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 CALB1P05937 261 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 COL6A1P12109 1028 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 FAM189BP81408 668 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 FAAP100Q0VG06 881 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 MESDQ14696 234 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 CNGA2Q16280 664 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 UPP1Q16831 310 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 GOLGA7BQ2TAP0 167 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 PTPN20Q4JDL3 420 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 CLLU1OSQ5K130 101 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 CPNE8Q86YQ8 564 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 DBF4BQ8NFT6 615 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 HES6Q96HZ4 224 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 LPIN3Q9BQK8 851 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 TRIM7Q9C029 511 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 FAM49BQ9NUQ9 324 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 SMARCAL1Q9NZC9 954 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 EHD2Q9NZN4 543 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 TJP2Q9UDY2 1190 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 ANAPC7Q9UJX3 599 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 TSPAN16Q9UKR8 245 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 KIAA1257Q9ULG3 409 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.91□□□□□ -0.02
GPNMB-203ENST00000409458 ALG6Q9Y672 507 aa14.91□□□□□ -0.02
GPNMB-203ENST00000409458 EFCAB8A8MWE9 144 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 CYB561D2O14569 222 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 GJB6O95452 261 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 EOMESO95936 686 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 WARSP23381 471 aaKnown RBP14.9□□□□□ -0.02
GPNMB-203ENST00000409458 LMO2P25791 158 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 RPL9P32969 192 aaKnown RBP14.9□□□□□ -0.02
GPNMB-203ENST00000409458 LBX1P52954 281 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 CKAP4Q07065 602 aaKnown RBP14.9□□□□□ -0.02
GPNMB-203ENST00000409458 MAMLD1Q13495 774 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 PPP1R26Q5T8A7 1209 aaPredicted RBP14.9□□□□□ -0.02
GPNMB-203ENST00000409458 CYP4A22Q5TCH4 519 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 PLEKHA7Q6IQ23 1121 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 LCLAT1Q6UWP7 414 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 SCLYQ96I15 445 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 PPP1R12CQ9BZL4 782 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 WNT8AQ9H1J5 351 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 SNX25Q9H3E2 840 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 HIPK3Q9H422 1215 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 TET1Q8NFU7 2136 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 TCRBV5S1A1TA0A578 114 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 CTAGE15A4D2H0 777 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 KCNK3O14649 394 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 DDX3YO15523 660 aaKnown RBP14.9□□□□□ -0.02
GPNMB-203ENST00000409458 PDGFRBP09619 1106 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 CTAGE8P0CG41 777 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 COMTP21964 271 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 GNL1P36915 607 aaPredicted RBP14.9□□□□□ -0.02
GPNMB-203ENST00000409458 GPD2P43304 727 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 CCL23P55773 120 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 TLE2Q04725 743 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 PDCLQ13371 301 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 TUSC3Q13454 348 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms