RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 TMC6Q7Z403 805 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 VPS52Q8N1B4 723 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 SPPL3Q8TCT6 385 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 FUBP3Q96I24 572 aaKnown RBP eCLIP13.89□□□□□ -0.19
LIMS2-203ENST00000409254 CEP295NLQ96MC4 621 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 ARID3AQ99856 593 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 C17orf80Q9BSJ5 609 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 GPR88Q9GZN0 384 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 SDCBP2Q9H190 292 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 NKX2-4Q9H2Z4 354 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 RXFP1Q9HBX9 757 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 ABCB6Q9NP58 842 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 LMCD1Q9NZU5 365 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 POLIQ9UNA4 740 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 MYO16Q9Y6X6 1858 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 PRRC2BQ5JSZ5 2229 aaKnown RBP13.88□□□□□ -0.19
LIMS2-203ENST00000409254 A8MXQ7 604 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 F8W810 466 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 RBAK-RBAKDNI3L0D1 243 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 FSCN2O14926 492 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 GFPT2O94808 682 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 MYOGP15173 224 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 PBX2P40425 430 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 NDST1P52848 882 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 CDK17Q00537 523 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 PTK2Q05397 1052 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 LRMPQ12912 555 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 SMC1AQ14683 1233 aaKnown RBP13.88□□□□□ -0.19
LIMS2-203ENST00000409254 PSMD5Q16401 504 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 TSR1Q2NL82 804 aaKnown RBP13.88□□□□□ -0.19
LIMS2-203ENST00000409254 INTS6LQ5JSJ4 861 aaKnown RBP13.88□□□□□ -0.19
LIMS2-203ENST00000409254 TPGS2Q68CL5 300 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 SCARA3Q6AZY7 606 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 PPP1R2P3Q6NXS1 205 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 TMEM270Q6UE05 265 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 RRAGAQ7L523 313 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 DCP1BQ8IZD4 617 aaKnown RBP13.88□□□□□ -0.19
LIMS2-203ENST00000409254 RBBP8NLQ8NC74 664 aaPredicted RBP13.88□□□□□ -0.19
LIMS2-203ENST00000409254 B3GALNT2Q8NCR0 500 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 OR8K1Q8NGG5 319 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 TMEM176AQ96HP8 235 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 PANX2Q96RD6 677 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 DDX43Q9NXZ2 648 aaKnown RBP13.88□□□□□ -0.19
LIMS2-203ENST00000409254 COLQQ9Y215 455 aaPredicted RBP13.88□□□□□ -0.19
LIMS2-203ENST00000409254 ATP8B3O60423 1300 aa13.88□□□□□ -0.19
LIMS2-203ENST00000409254 AKR1B15C9JRZ8 316 aaPredicted RBP13.87□□□□□ -0.19
LIMS2-203ENST00000409254 MED7O43513 233 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 LILRB3O75022 631 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 ARHGEF15O94989 841 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 WEE2P0C1S8 567 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 VDRP11473 427 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 FECHP22830 423 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 KRT9P35527 623 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 NDUFV1P49821 464 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 FXR1P51114 621 aaKnown RBP eCLIP13.87□□□□□ -0.19
LIMS2-203ENST00000409254 PDE6CP51160 858 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 RAD23BP54727 409 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 PTPN14Q15678 1187 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 PTPROQ16827 1216 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 CFAP221Q4G0U5 840 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 RTP2Q5QGT7 225 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 ARHGAP17Q68EM7 881 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 FAM171BQ6P995 826 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 C4orf50Q6ZRC1 276 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 TMEM130Q8N3G9 435 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 SLC4A11Q8NBS3 891 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 OR6B3Q8NGW1 331 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 LNX1Q8TBB1 728 aaPredicted RBP13.87□□□□□ -0.19
LIMS2-203ENST00000409254 WHAMMQ8TF30 809 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 POF1BQ8WVV4 589 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 RABGGTAQ92696 567 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 PPP2R3CQ969Q6 453 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 PKMYT1Q99640 499 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 SYT15Q9BQS2 421 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 MRPL45Q9BRJ2 306 aaKnown RBP13.87□□□□□ -0.19
LIMS2-203ENST00000409254 EMILIN2Q9BXX0 1053 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 ZCWPW1Q9H0M4 648 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 NLRC4Q9NPP4 1024 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 ABHD10Q9NUJ1 306 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 ZNHIT6Q9NWK9 470 aaKnown RBP13.87□□□□□ -0.19
LIMS2-203ENST00000409254 PCDHB4Q9Y5E5 795 aa13.87□□□□□ -0.19
LIMS2-203ENST00000409254 REV3LO60673 3130 aa13.86□□□□□ -0.19
LIMS2-203ENST00000409254 LRRC53A6NM62 1247 aa13.86□□□□□ -0.19
LIMS2-203ENST00000409254 FOXN3O00409 490 aaPredicted RBP13.86□□□□□ -0.19
LIMS2-203ENST00000409254 LPXNO60711 386 aa13.86□□□□□ -0.19
LIMS2-203ENST00000409254 ADH1AP07327 375 aa13.86□□□□□ -0.19
LIMS2-203ENST00000409254 KRT5P13647 590 aa13.86□□□□□ -0.19
LIMS2-203ENST00000409254 CD58P19256 250 aa13.86□□□□□ -0.19
LIMS2-203ENST00000409254 POU3F3P20264 500 aaPredicted RBP13.86□□□□□ -0.19
LIMS2-203ENST00000409254 CASP14P31944 242 aa13.86□□□□□ -0.19
LIMS2-203ENST00000409254 CDH8P55286 799 aa13.86□□□□□ -0.19
LIMS2-203ENST00000409254 GPR17Q13304 367 aa13.86□□□□□ -0.19
LIMS2-203ENST00000409254 GPM6BQ13491 265 aa13.86□□□□□ -0.19
LIMS2-203ENST00000409254 ARHGAP44Q17R89 818 aa13.86□□□□□ -0.19
LIMS2-203ENST00000409254 CTXN3Q4LDR2 81 aa13.86□□□□□ -0.19
LIMS2-203ENST00000409254 SGO2Q562F6 1265 aa13.86□□□□□ -0.19
LIMS2-203ENST00000409254 SFMBT2Q5VUG0 894 aa13.86□□□□□ -0.19
LIMS2-203ENST00000409254 GJB7Q6PEY0 223 aa13.86□□□□□ -0.19
LIMS2-203ENST00000409254 TMC7Q7Z402 723 aa13.86□□□□□ -0.19
LIMS2-203ENST00000409254 MYCBPAPQ8TBZ2 947 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms