RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 RHOAP61586 193 aa5.26□□□□□ -1.57
SCN3A-203ENST00000409101 ZNF284Q2VY69 593 aa5.26□□□□□ -1.57
SCN3A-203ENST00000409101 EDRF1Q3B7T1 1238 aa5.26□□□□□ -1.57
SCN3A-203ENST00000409101 NOMO2Q5JPE7 1267 aa5.26□□□□□ -1.57
SCN3A-203ENST00000409101 MTHFD1LQ6UB35 978 aa5.26□□□□□ -1.57
SCN3A-203ENST00000409101 DHX40Q8IX18 779 aaKnown RBP5.26□□□□□ -1.57
SCN3A-203ENST00000409101 SLC30A5Q8TAD4 765 aa5.26□□□□□ -1.57
SCN3A-203ENST00000409101 TRAPPC12Q8WVT3 735 aa5.26□□□□□ -1.57
SCN3A-203ENST00000409101 AHCYL2Q96HN2 611 aaKnown RBP5.26□□□□□ -1.57
SCN3A-203ENST00000409101 MKNK1Q9BUB5 465 aa5.26□□□□□ -1.57
SCN3A-203ENST00000409101 PRDM10Q9NQV6 1147 aa5.26□□□□□ -1.57
SCN3A-203ENST00000409101 CYP39A1Q9NYL5 469 aa5.26□□□□□ -1.57
SCN3A-203ENST00000409101 SELENONQ9NZV5 590 aa5.26□□□□□ -1.57
SCN3A-203ENST00000409101 ZMYND8Q9ULU4 1186 aaPredicted RBP5.26□□□□□ -1.57
SCN3A-203ENST00000409101 MRPS23Q9Y3D9 190 aaKnown RBP5.26□□□□□ -1.57
SCN3A-203ENST00000409101 SNCAIPQ9Y6H5 919 aa5.26□□□□□ -1.57
SCN3A-203ENST00000409101 H2AFYO75367 372 aaKnown RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 MED24O75448 989 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 YWHAQP27348 245 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 MAPK9P45984 424 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 GEMIN4P57678 1058 aaKnown RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 DHX9Q08211 1270 aaKnown RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 GPS1Q13098 491 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 ITGA7Q13683 1181 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 NBPF20Q3BBV1 942 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 PLPP4Q5VZY2 271 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 PPP2R2DQ66LE6 453 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 HELQQ8TDG4 1101 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 BPIFA3Q9BQP9 254 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 CELF4Q9BZC1 486 aaKnown RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 UBXN6Q9BZV1 441 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 DCLK3Q9C098 648 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 RIOX1Q9H6W3 641 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 TLE6Q9H808 572 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 OLFML3Q9NRN5 406 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 ABHD10Q9NUJ1 306 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 TBK1Q9UHD2 729 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 SLC39A10Q9ULF5 831 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 SF3B1O75533 1304 aaKnown RBP eCLIP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 ARHGEF28Q8N1W1 1705 aaKnown RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 COPEO14579 308 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 SEPT4O43236 478 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 F9P00740 461 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 CXCL8P10145 99 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 UBA1P22314 1058 aaKnown RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 LIG3P49916 1009 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 C21orf59P57076 290 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 ORC1Q13415 861 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 PLCL1Q15111 1095 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 USP41Q3LFD5 358 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 PABPC1LQ4VXU2 614 aaKnown RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 FMR1NBQ8N0W7 255 aaPredicted RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 TSPAN17Q96FV3 270 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 FAM129AQ9BZQ8 928 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 TMEM60Q9H2L4 133 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 KDM4CQ9H3R0 1056 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 GIMAP4Q9NUV9 329 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 DNAJC17Q9NVM6 304 aaKnown RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 CDC23Q9UJX2 597 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 NFU1Q9UMS0 254 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 TIMM13Q9Y5L4 95 aaPredicted RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 TCRBV5S4A2TA0A5A2 114 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 PPFIA2O75334 1257 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 CSDE1O75534 798 aaKnown RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 CXCL14O95715 111 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 SP100P23497 879 aaPredicted RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 CHRNA3P32297 505 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 PKN3Q6P5Z2 889 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 CTU1Q7Z7A3 348 aaKnown RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 IFNL1Q8IU54 200 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 RNF135Q8IUD6 432 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 CERS5Q8N5B7 392 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 ZNF557Q8N988 423 aaPredicted RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 RFFLQ8WZ73 363 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 COPS5Q92905 334 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 NCLNQ969V3 563 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 SMARCD1Q96GM5 515 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 CABS1Q96KC9 395 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 PGLYRP2Q96PD5 576 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 CORO1BQ9BR76 489 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 TEX12Q9BXU0 123 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 TRIM15Q9C019 465 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 ARHGEF38Q9NXL2 777 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 AIPL1Q9NZN9 384 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 STK39Q9UEW8 545 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 RPTORQ8N122 1335 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 ZNF263O14978 683 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 ERVK-10P10266 1014 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 POLR2EP19388 210 aaKnown RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 CCT5P48643 541 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 EPHB4P54760 987 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 VCPP55072 806 aaKnown RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 FPGSQ05932 587 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 BST2Q10589 180 aaKnown RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 DPYDQ12882 1025 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 TIGD7Q6NT04 549 aaPredicted RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 MSL3Q8N5Y2 521 aaKnown RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 ELMO2Q96JJ3 720 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 SEZ6LQ9BYH1 1024 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 UVRAGQ9P2Y5 699 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms