RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 ACOT1Q86TX2 421 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 METTL23Q86XA0 190 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 ZNF677Q86XU0 584 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 COLGALT1Q8NBJ5 622 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 SPATA18Q8TC71 538 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 TFAP2BQ92481 460 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 ZSWIM1Q9BR11 485 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 SEPT11Q9NVA2 429 aaKnown RBP21.8■■□□□ 1.08
CHKB-201ENST00000406938 DDX43Q9NXZ2 648 aaKnown RBP21.8■■□□□ 1.08
CHKB-201ENST00000406938 ZKSCAN5Q9Y2L8 839 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 DDX3XO00571 662 aaKnown RBP eCLIP21.79■■□□□ 1.08
CHKB-201ENST00000406938 ACAT1P24752 427 aaKnown RBP21.79■■□□□ 1.08
CHKB-201ENST00000406938 SLC18A3Q16572 532 aa21.79■■□□□ 1.08
CHKB-201ENST00000406938 FIBCD1Q8N539 461 aa21.79■■□□□ 1.08
CHKB-201ENST00000406938 SP7Q8TDD2 431 aaPredicted RBP21.79■■□□□ 1.08
CHKB-201ENST00000406938 ZNF606Q8WXB4 792 aa21.79■■□□□ 1.08
CHKB-201ENST00000406938 IGSF21Q96ID5 467 aa21.79■■□□□ 1.08
CHKB-201ENST00000406938 HEXIM2Q96MH2 286 aaKnown RBP21.79■■□□□ 1.08
CHKB-201ENST00000406938 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.79■■□□□ 1.08
CHKB-201ENST00000406938 EIF3CLB5ME19 914 aaKnown RBP21.78■■□□□ 1.08
CHKB-201ENST00000406938 SYN3O14994 580 aa21.78■■□□□ 1.08
CHKB-201ENST00000406938 TNFAIP3P21580 790 aa21.78■■□□□ 1.08
CHKB-201ENST00000406938 ELAVL2Q12926 359 aaKnown RBP21.78■■□□□ 1.08
CHKB-201ENST00000406938 FAM171A1Q5VUB5 890 aa21.78■■□□□ 1.08
CHKB-201ENST00000406938 OVOS1Q6IE37 1185 aa21.78■■□□□ 1.08
CHKB-201ENST00000406938 PALB2Q86YC2 1186 aa21.78■■□□□ 1.08
CHKB-201ENST00000406938 SLC39A11Q8N1S5 342 aa21.78■■□□□ 1.08
CHKB-201ENST00000406938 ACRBPQ8NEB7 543 aa21.78■■□□□ 1.08
CHKB-201ENST00000406938 EIF3CQ99613 913 aaKnown RBP21.78■■□□□ 1.08
CHKB-201ENST00000406938 RTP3Q9BQQ7 232 aa21.78■■□□□ 1.08
CHKB-201ENST00000406938 LCHNA4D1U4 455 aa21.77■■□□□ 1.08
CHKB-201ENST00000406938 ZNF263O14978 683 aa21.77■■□□□ 1.08
CHKB-201ENST00000406938 LINC00271P0C7V0 271 aa21.77■■□□□ 1.08
CHKB-201ENST00000406938 VDRP11473 427 aa21.77■■□□□ 1.08
CHKB-201ENST00000406938 SSTR3P32745 418 aaPredicted RBP21.77■■□□□ 1.08
CHKB-201ENST00000406938 PSMC1P62191 440 aaKnown RBP21.77■■□□□ 1.08
CHKB-201ENST00000406938 YWHAHQ04917 246 aaPredicted RBP21.77■■□□□ 1.08
CHKB-201ENST00000406938 CRYBG2Q8N1P7 616 aa21.77■■□□□ 1.08
CHKB-201ENST00000406938 C12orf29Q8N999 325 aa21.77■■□□□ 1.08
CHKB-201ENST00000406938 SLC30A5Q8TAD4 765 aa21.77■■□□□ 1.08
CHKB-201ENST00000406938 TNIP3Q96KP6 325 aa21.77■■□□□ 1.08
CHKB-201ENST00000406938 GDF15Q99988 308 aa21.77■■□□□ 1.08
CHKB-201ENST00000406938 UBE2OQ9C0C9 1292 aaKnown RBP21.77■■□□□ 1.08
CHKB-201ENST00000406938 KIAA1671Q9BY89 1806 aa21.77■■□□□ 1.08
CHKB-201ENST00000406938 CARNS1A5YM72 827 aa21.77■■□□□ 1.07
CHKB-201ENST00000406938 H0YGN5 161 aa21.77■■□□□ 1.07
CHKB-201ENST00000406938 LCA5LO95447 670 aa21.77■■□□□ 1.07
CHKB-201ENST00000406938 CFHP08603 1231 aa21.77■■□□□ 1.07
CHKB-201ENST00000406938 CYP27A1Q02318 531 aa21.77■■□□□ 1.07
CHKB-201ENST00000406938 SGO2Q562F6 1265 aa21.77■■□□□ 1.07
CHKB-201ENST00000406938 KIAA0319Q5VV43 1072 aa21.77■■□□□ 1.07
CHKB-201ENST00000406938 FAM109BQ6ICB4 259 aaPredicted RBP21.77■■□□□ 1.07
CHKB-201ENST00000406938 CEP57Q86XR8 500 aa21.77■■□□□ 1.07
CHKB-201ENST00000406938 B3GALNT2Q8NCR0 500 aa21.77■■□□□ 1.07
CHKB-201ENST00000406938 B3GALT6Q96L58 329 aa21.77■■□□□ 1.07
CHKB-201ENST00000406938 PCDHB18PQ96TA0 734 aa21.77■■□□□ 1.07
CHKB-201ENST00000406938 LPIN3Q9BQK8 851 aa21.77■■□□□ 1.07
CHKB-201ENST00000406938 SYT15Q9BQS2 421 aa21.77■■□□□ 1.07
CHKB-201ENST00000406938 VN1R3Q9BXE9 311 aa21.77■■□□□ 1.07
CHKB-201ENST00000406938 DNAI2Q9GZS0 605 aa21.77■■□□□ 1.07
CHKB-201ENST00000406938 FAM49BQ9NUQ9 324 aa21.77■■□□□ 1.07
CHKB-201ENST00000406938 REXO2Q9Y3B8 237 aaKnown RBP21.77■■□□□ 1.07
CHKB-201ENST00000406938 LAMA2P24043 3122 aaKnown RBP21.77■■□□□ 1.07
CHKB-201ENST00000406938 MED7O43513 233 aa21.76■■□□□ 1.07
CHKB-201ENST00000406938 ATP2C2O75185 946 aa21.76■■□□□ 1.07
CHKB-201ENST00000406938 IPO7O95373 1038 aaKnown RBP21.76■■□□□ 1.07
CHKB-201ENST00000406938 EFEMP2O95967 443 aa21.76■■□□□ 1.07
CHKB-201ENST00000406938 FGFR3P22607 806 aa21.76■■□□□ 1.07
CHKB-201ENST00000406938 PCSK1P29120 753 aa21.76■■□□□ 1.07
CHKB-201ENST00000406938 RABGGTBP53611 331 aa21.76■■□□□ 1.07
CHKB-201ENST00000406938 CCDC142Q17RM4 750 aa21.76■■□□□ 1.07
CHKB-201ENST00000406938 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.76■■□□□ 1.07
CHKB-201ENST00000406938 PASD1Q8IV76 773 aa21.76■■□□□ 1.07
CHKB-201ENST00000406938 CLP1Q92989 425 aaKnown RBP21.76■■□□□ 1.07
CHKB-201ENST00000406938 TMEM169Q96HH4 297 aa21.76■■□□□ 1.07
CHKB-201ENST00000406938 PDCL3Q9H2J4 239 aa21.76■■□□□ 1.07
CHKB-201ENST00000406938 AAASQ9NRG9 546 aa21.76■■□□□ 1.07
CHKB-201ENST00000406938 SPG21Q9NZD8 308 aa21.76■■□□□ 1.07
CHKB-201ENST00000406938 NAGPAQ9UK23 515 aa21.76■■□□□ 1.07
CHKB-201ENST00000406938 KIAA1257Q9ULG3 409 aa21.76■■□□□ 1.07
CHKB-201ENST00000406938 NENFQ9UMX5 172 aa21.76■■□□□ 1.07
CHKB-201ENST00000406938 ADGRG1Q9Y653 693 aa21.76■■□□□ 1.07
CHKB-201ENST00000406938 FAM170AA1A519 330 aa21.75■■□□□ 1.07
CHKB-201ENST00000406938 O00370 1275 aa21.75■■□□□ 1.07
CHKB-201ENST00000406938 PPM1AP35813 382 aa21.75■■□□□ 1.07
CHKB-201ENST00000406938 SPA17Q15506 151 aa21.75■■□□□ 1.07
CHKB-201ENST00000406938 VARS2Q5ST30 1063 aaKnown RBP21.75■■□□□ 1.07
CHKB-201ENST00000406938 TAS1R1Q7RTX1 841 aa21.75■■□□□ 1.07
CHKB-201ENST00000406938 RNF168Q8IYW5 571 aaPredicted RBP21.75■■□□□ 1.07
CHKB-201ENST00000406938 OR10T2Q8NGX3 314 aa21.75■■□□□ 1.07
CHKB-201ENST00000406938 CDH9Q9ULB4 789 aa21.75■■□□□ 1.07
CHKB-201ENST00000406938 PCDHGC3Q9UN70 934 aa21.75■■□□□ 1.07
CHKB-201ENST00000406938 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.75■■□□□ 1.07
CHKB-201ENST00000406938 GRXCR1A8MXD5 290 aa21.74■■□□□ 1.07
CHKB-201ENST00000406938 CEP290O15078 2479 aa21.74■■□□□ 1.07
CHKB-201ENST00000406938 OAZ2O95190 189 aa21.74■■□□□ 1.07
CHKB-201ENST00000406938 CCDC175P0C221 793 aa21.74■■□□□ 1.07
CHKB-201ENST00000406938 PTPN1P18031 435 aaKnown RBP21.74■■□□□ 1.07
CHKB-201ENST00000406938 RTP2Q5QGT7 225 aa21.74■■□□□ 1.07
CHKB-201ENST00000406938 PPP1R26Q5T8A7 1209 aaPredicted RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms