RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 LAMB3Q13751 1172 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 EPC2Q52LR7 807 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 SH3D19Q5HYK7 790 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 NUGGCQ68CJ6 796 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 C1orf228Q6PIY5 440 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 LMNTD2Q8IXW0 634 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 NKX2-3Q8TAU0 364 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 ASAP3Q8TDY4 903 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 ZNF606Q8WXB4 792 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 SCG3Q8WXD2 468 aaKnown RBP4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 SGSM3Q96HU1 749 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 PNKPQ96T60 521 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 TBCBQ99426 244 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 NIFKQ9BYG3 293 aaKnown RBP4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 PITPNM3Q9BZ71 974 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 METTL5Q9NRN9 209 aaKnown RBP4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 CPA4Q9UI42 421 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 NEU2Q9Y3R4 380 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 AFG3L2Q9Y4W6 797 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 PCDHA3Q9Y5H8 950 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 NRCAMQ92823 1304 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 COL16A1Q07092 1604 aaPredicted RBP4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 KPNA7A9QM74 516 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 RBAK-RBAKDNI3L0D1 243 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 TADA2AO75478 443 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 USP2O75604 605 aaPredicted RBP4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 TOMM70O94826 608 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 S100BP04271 92 aaPredicted RBP4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 CTSHP09668 335 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 FECHP22830 423 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 MDH1P40925 334 aaKnown RBP4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 PSMC4P43686 418 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 KCNA1Q09470 495 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 TMEM62Q0P6H9 643 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 NME3Q13232 169 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 RPS6KA2Q15349 733 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 KIZQ2M2Z5 673 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 ANO4Q32M45 955 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 ZACNQ401N2 412 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 TFDP3Q5H9I0 405 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 SPDYCQ5MJ68 293 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 PHLDB3Q6NSJ2 640 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 KLC3Q6P597 504 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 ANO5Q75V66 913 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 ANKRD23Q86SG2 305 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 NT5DC3Q86UY8 548 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 CRLF3Q8IUI8 442 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 PPIL6Q8IXY8 311 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 MSL3Q8N5Y2 521 aaKnown RBP4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 ARRDC4Q8NCT1 418 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 EPS8L1Q8TE68 723 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 SH3TC2Q8TF17 1288 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 C7orf43Q8WVR3 580 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 CASKIN2Q8WXE0 1202 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 CHMP6Q96FZ7 201 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 TINF2Q9BSI4 451 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 TRIM55Q9BYV6 548 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 PABPC3Q9H361 631 aaKnown RBP4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 FAM49BQ9NUQ9 324 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 RRN3Q9NYV6 651 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 SMARCAL1Q9NZC9 954 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 ZNF541Q9H0D2 1346 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 NFKBIEO00221 500 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 KCNN4O15554 427 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 GPC4O75487 556 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 VTNP04004 478 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 HMGCRP04035 888 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 CXCL8P10145 99 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 RARGP13631 454 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 CPB1P15086 417 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 KCNA2P16389 499 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 SSTR3P32745 418 aaPredicted RBP4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 SOX10P56693 466 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 MFSD10Q14728 455 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 PLCB4Q15147 1175 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 ZKSCAN8Q15776 578 aaPredicted RBP4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 SHROOM1Q2M3G4 852 aaPredicted RBP4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 SEZ6Q53EL9 994 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 LRRC38Q5VT99 294 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 MTHFD1LQ6UB35 978 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 PID1Q7Z2X4 250 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 ZC3H18Q86VM9 953 aaKnown RBP4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 NLRP14Q86W24 1093 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 UNC93AQ86WB7 457 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 TMEM139Q8IV31 216 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 WDR75Q8IWA0 830 aaKnown RBP4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 PPM1NQ8N819 430 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 UBA3Q8TBC4 463 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 SPATA18Q8TC71 538 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 SERPINB12Q96P63 405 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 ZIM3Q96PE6 472 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 COLEC11Q9BWP8 271 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 PPP1R12CQ9BZL4 782 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 FAM124BQ9H5Z6 455 aaPredicted RBP4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 XAB2Q9HCS7 855 aaKnown RBP4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 OSGEPQ9NPF4 335 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 BAIAP2L1Q9UHR4 511 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 SLC8A2Q9UPR5 921 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 MROH7Q68CQ1 1323 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms