RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 GPRC5CQ9NQ84 441 aa10.14□□□□□ -0.79
NUP43-204ENST00000403890 ANO2Q9NQ90 1003 aa10.14□□□□□ -0.79
NUP43-204ENST00000403890 MBD1Q9UIS9 605 aaPredicted RBP10.14□□□□□ -0.79
NUP43-204ENST00000403890 ZNF462Q96JM2 2506 aa10.14□□□□□ -0.79
NUP43-204ENST00000403890 KALRNO60229 2985 aa10.14□□□□□ -0.79
NUP43-204ENST00000403890 USO1O60763 962 aaKnown RBP10.13□□□□□ -0.79
NUP43-204ENST00000403890 OPHN1O60890 802 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 VNN2O95498 520 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 PRB1P04280 392 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 HMGB1P09429 215 aaKnown RBP10.13□□□□□ -0.79
NUP43-204ENST00000403890 IFNAR1P17181 557 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 DPP6P42658 865 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 YARSP54577 528 aaKnown RBP10.13□□□□□ -0.79
NUP43-204ENST00000403890 PSMD2Q13200 908 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 ADCK5Q3MIX3 580 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 TSGA10IPQ3SY00 556 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 XKR4Q5GH76 650 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 TRIM68Q6AZZ1 485 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 GALNT17Q6IS24 598 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 ALKAL1Q6UXT8 129 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 KRT25Q7Z3Z0 450 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 RASSF3Q86WH2 238 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 SLFN12Q8IYM2 578 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 DAGLBQ8NCG7 672 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 CCDC26Q8TAB7 109 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 PSMG2Q969U7 264 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 CNOT6LQ96LI5 555 aaKnown RBP10.13□□□□□ -0.79
NUP43-204ENST00000403890 TBC1D32Q96NH3 1257 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 UBL7Q96S82 380 aaPredicted RBP10.13□□□□□ -0.79
NUP43-204ENST00000403890 ESYT1Q9BSJ8 1104 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 POLR3CQ9BUI4 534 aaPredicted RBP10.13□□□□□ -0.79
NUP43-204ENST00000403890 SLC46A2Q9BY10 475 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 OXCT2Q9BYC2 517 aaPredicted RBP10.13□□□□□ -0.79
NUP43-204ENST00000403890 SMG9Q9H0W8 520 aaKnown RBP10.13□□□□□ -0.79
NUP43-204ENST00000403890 TOPORSQ9NS56 1045 aaPredicted RBP10.13□□□□□ -0.79
NUP43-204ENST00000403890 TMEM74BQ9NUR3 256 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 TBX20Q9UMR3 447 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 SLC27A5Q9Y2P5 690 aa10.13□□□□□ -0.79
NUP43-204ENST00000403890 KIF26AQ9ULI4 1882 aaPredicted RBP10.13□□□□□ -0.79
NUP43-204ENST00000403890 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 OAZ2O95190 189 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 BAG4O95429 457 aaKnown RBP10.12□□□□□ -0.79
NUP43-204ENST00000403890 CFIP05156 583 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 XRCC6P12956 609 aaKnown RBP eCLIP10.12□□□□□ -0.79
NUP43-204ENST00000403890 PLA2G2AP14555 144 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 U2AF2P26368 475 aaKnown RBP eCLIP10.12□□□□□ -0.79
NUP43-204ENST00000403890 MCM4P33991 863 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 PTGER3P43115 390 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 YWHAHQ04917 246 aaPredicted RBP10.12□□□□□ -0.79
NUP43-204ENST00000403890 GFPT1Q06210 699 aaPredicted RBP10.12□□□□□ -0.79
NUP43-204ENST00000403890 TRIP6Q15654 476 aaKnown RBP10.12□□□□□ -0.79
NUP43-204ENST00000403890 KMT5BQ4FZB7 885 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 NAIF1Q69YI7 327 aaPredicted RBP10.12□□□□□ -0.79
NUP43-204ENST00000403890 CENPPQ6IPU0 288 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 ANO7Q6IWH7 933 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 CC2D1AQ6P1N0 951 aaPredicted RBP10.12□□□□□ -0.79
NUP43-204ENST00000403890 NEK8Q86SG6 692 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 ZNF605Q86T29 641 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 ITIH5Q86UX2 942 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 TMEFF1Q8IYR6 380 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 MCPH1Q8NEM0 835 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 DEPTORQ8TB45 409 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 PIGOQ8TEQ8 1089 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 BRF1Q92994 677 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 GCNAQ96QF7 691 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 CCDC94Q9BW85 323 aaPredicted RBP10.12□□□□□ -0.79
NUP43-204ENST00000403890 GTPBP2Q9BX10 602 aaKnown RBP10.12□□□□□ -0.79
NUP43-204ENST00000403890 CCDC113Q9H0I3 377 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 CRISPLD1Q9H336 500 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 ZMYM5Q9UJ78 669 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 SLC6A14Q9UN76 642 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 PCDHB9Q9Y5E1 797 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 NID2Q14112 1375 aa10.12□□□□□ -0.79
NUP43-204ENST00000403890 HECTD1Q9ULT8 2610 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 A0A087WWV3 80 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 CCNT1O60563 726 aaKnown RBP10.11□□□□□ -0.79
NUP43-204ENST00000403890 EDN1P05305 212 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 OR4Q2P0C623 313 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 FTH1P19P0C7X4 201 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 CD59P13987 128 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 ARSAP15289 507 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 KCNE1P15382 129 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 ATP2B1P20020 1258 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 CDC25CP30307 473 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 GJA4P35212 333 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 HOXD12P35452 270 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 GRM5P41594 1212 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 CYP4F8P98187 520 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 BFSP1Q12934 665 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 GPR17Q13304 367 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 KRT32Q14532 448 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 PDGFRLQ15198 375 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 NPY5RQ15761 445 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 DUOXA1Q1HG43 343 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 PKDCCQ504Y2 493 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 SPDYCQ5MJ68 293 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 ATF7IP2Q5U623 682 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 Q6ZUG5 572 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 ARMCX6Q7L4S7 300 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 TRIM22Q8IYM9 498 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms