RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 CTCFP49711 727 aaPredicted RBP12.62□□□□□ -0.39
RBM39-206ENST00000403542 GPX6P59796 221 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 BASP1P80723 227 aaKnown RBP12.62□□□□□ -0.39
RBM39-206ENST00000403542 SP2Q02086 613 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 GPAT2Q6NUI2 795 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 RFWD3Q6PCD5 774 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 SPOCD1Q6ZMY3 1216 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 LRRC6Q86X45 466 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 FAM13CQ8NE31 585 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 PYROXD1Q8WU10 500 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 ATP6V0A1Q93050 837 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 ZBTB10Q96DT7 871 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 FBXO6Q9NRD1 293 aaPredicted RBP12.62□□□□□ -0.39
RBM39-206ENST00000403542 LTBP4Q8N2S1 1624 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 AVILO75366 819 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 T-ENOLP0DO92 83 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 GLRA2P23416 452 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 SFNP31947 248 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 CETN2P41208 172 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 RAP1GAPP47736 663 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 MYL6P60660 151 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 EMC2Q15006 297 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 HIF1AQ16665 826 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 MDH1BQ5I0G3 518 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 RNF43Q68DV7 783 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 PLEKHA7Q6IQ23 1121 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 CCDC33Q8N5R6 958 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 ACTL9Q8TC94 416 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 ZNF75CPQ92670 426 aaPredicted RBP12.62□□□□□ -0.39
RBM39-206ENST00000403542 PTPRN2Q92932 1015 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 EURLQ9NYK6 297 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 CHMP2BQ9UQN3 213 aa12.62□□□□□ -0.39
RBM39-206ENST00000403542 PMM2O15305 246 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 CST8O60676 142 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 DGAT1O75907 488 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 ITGBL1O95965 494 aaPredicted RBP12.61□□□□□ -0.39
RBM39-206ENST00000403542 SRGAP2CP0DJJ0 459 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 ALADP13716 330 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 MARK3P27448 753 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 CPA2P48052 419 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 BPIFB4P59827 614 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 TFAMQ00059 246 aaKnown RBP12.61□□□□□ -0.39
RBM39-206ENST00000403542 OTUD4Q01804 1114 aaKnown RBP12.61□□□□□ -0.39
RBM39-206ENST00000403542 PTP4A2Q12974 167 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 C15orf39Q6ZRI6 1047 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 ZC3H18Q86VM9 953 aaKnown RBP12.61□□□□□ -0.39
RBM39-206ENST00000403542 SAMD3Q8N6K7 520 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 ALLCQ8N6M5 410 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 FAM71DQ8N9W8 422 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 TCP10LQ8TDR4 215 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 HSPH1Q92598 858 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 TRIM11Q96F44 468 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 TRIM6Q9C030 488 aaPredicted RBP12.61□□□□□ -0.39
RBM39-206ENST00000403542 TXLNGQ9NUQ3 528 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 SLC5A4Q9NY91 659 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 USH1CQ9Y6N9 552 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 THSD7AQ9UPZ6 1657 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 EDF1O60869 148 aaKnown RBP12.61□□□□□ -0.39
RBM39-206ENST00000403542 CCNB1P14635 433 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 RFC1P35251 1148 aaPredicted RBP12.61□□□□□ -0.39
RBM39-206ENST00000403542 EAPPQ56P03 285 aaPredicted RBP12.61□□□□□ -0.39
RBM39-206ENST00000403542 CENPUQ71F23 418 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 ENOSF1Q7L5Y1 443 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 NLRP9Q7RTR0 991 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 VSIG10LQ86VR7 867 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 CCDC125Q86Z20 511 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 FBXO36Q8NEA4 188 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 DTX3LQ8TDB6 740 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 DENND1AQ8TEH3 1009 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 TFAP2BQ92481 460 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 TTC17Q96AE7 1141 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 NTPCRQ9BSD7 190 aaKnown RBP12.61□□□□□ -0.39
RBM39-206ENST00000403542 ARHGAP28Q9P2N2 729 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 SLC9A2Q9UBY0 812 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 ZFP69BQ9UJL9 534 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 CLUHO75153 1309 aa12.61□□□□□ -0.39
RBM39-206ENST00000403542 ENO4A6NNW6 628 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 WDR46O15213 610 aaKnown RBP12.6□□□□□ -0.39
RBM39-206ENST00000403542 ONECUT3O60422 494 aaPredicted RBP12.6□□□□□ -0.39
RBM39-206ENST00000403542 TCEA3O75764 348 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 FAM155BO75949 473 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 STBD1O95210 358 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 KRT19P08727 400 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 KCNA2P16389 499 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 GARTP22102 1010 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 IL1R2P27930 398 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 GCKP35557 465 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 PCK1P35558 622 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 ABL2P42684 1182 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 HMGCS2P54868 508 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 MKRN3Q13064 507 aaKnown RBP12.6□□□□□ -0.39
RBM39-206ENST00000403542 MOGSQ13724 837 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 CRYMQ14894 314 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 PSMD6Q15008 389 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 FAXCQ5TGI0 409 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 NIPA1Q7RTP0 329 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 APBB1IPQ7Z5R6 666 aaPredicted RBP12.6□□□□□ -0.39
RBM39-206ENST00000403542 BBOF1Q8ND07 529 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 JOSD2Q8TAC2 188 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 SLC7A6OSQ96CW6 309 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms