RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 NMT1P30419 496 aaKnown RBP12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 CCT6AP40227 531 aaKnown RBP12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 ALDH1A3P47895 512 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 PLCB2Q00722 1185 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 PLD1Q13393 1074 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 IL17AQ16552 155 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 RINT1Q6NUQ1 792 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 LRSAM1Q6UWE0 723 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 C1orf186Q6ZWK4 172 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 GIPC2Q8TF65 315 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 WASF1Q92558 559 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 GTF3C6Q969F1 213 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 TCHPQ9BT92 498 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 BRMS1Q9HCU9 246 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 ANKFY1Q9P2R3 1169 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 TBX20Q9UMR3 447 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 ASB3Q9Y575 518 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 LACTBL1A8MY62 500 aa12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 EPB41L2O43491 1005 aaKnown RBP12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 F11P03951 625 aa12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 CAPNS1P04632 268 aa12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 HMGA1P17096 107 aaKnown RBP12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 TYMPP19971 482 aa12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 MUTP22033 750 aa12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 CDC25AP30304 524 aa12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 MCL1Q07820 350 aa12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 GRSF1Q12849 480 aaKnown RBP eCLIP12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 MYBPC2Q14324 1141 aa12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 NOLC1Q14978 699 aaKnown RBP eCLIP12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 OVOS1Q6IE37 1185 aa12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 KIAA1211LQ6NV74 962 aa12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 HAUS6Q7Z4H7 955 aa12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 APBB1IPQ7Z5R6 666 aaPredicted RBP12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 CMTM8Q8IZV2 173 aa12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 CAMKK1Q8N5S9 505 aa12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 TMEM161BQ8NDZ6 487 aa12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 RPLP0P6Q8NHW5 317 aa12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 KIF12Q96FN5 646 aa12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 SENP8Q96LD8 212 aa12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 NTPCRQ9BSD7 190 aaKnown RBP12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 MMTAG2Q9BU76 263 aaKnown RBP12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 KMT5AQ9NQR1 393 aa12.93□□□□□ -0.34
SPTLC1P3-201ENST00000403408 TNRC6BQ9UPQ9 1833 aaKnown RBP12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 CFAP46Q8IYW2 2715 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 ANAPC1Q9H1A4 1944 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 MYOFQ9NZM1 2061 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 TADA3O75528 432 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 TOM1L1O75674 476 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 MAPTP10636 758 aaKnown RBP12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 CHRM1P11229 460 aaPredicted RBP12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 HNRNPLP14866 589 aaKnown RBP eCLIP12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 GJA4P35212 333 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 GPR15P49685 360 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 LILRA4P59901 499 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 IRX4P78413 519 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 DMC1Q14565 340 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 ENOX2Q16206 610 aaKnown RBP12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 SLC39A12Q504Y0 691 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 PMS2CLQ68D20 193 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 TXNDC8Q6A555 127 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 DSTYKQ6XUX3 929 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 DEFB124Q8NES8 71 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 ERMNQ8TAM6 284 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 SEPT5Q99719 369 aaPredicted RBP12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 ZCWPW1Q9H0M4 648 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 TMLHEQ9NVH6 421 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 DAXXQ9UER7 740 aaPredicted RBP12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 EBF1Q9UH73 591 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 ADAMTS9Q9P2N4 1935 aa12.92□□□□□ -0.34
SPTLC1P3-201ENST00000403408 HYAL3O43820 417 aaPredicted RBP12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 ATG13O75143 517 aa12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 ADRB2P07550 413 aa12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 CYP3A5P20815 502 aa12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 CSRP1P21291 193 aaKnown RBP12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 RAD51AP2Q09MP3 1159 aa12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 DMP1Q13316 513 aaPredicted RBP12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 ARHGAP15Q53QZ3 475 aa12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 SCARA3Q6AZY7 606 aa12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 SYT13Q7L8C5 426 aa12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 USP37Q86T82 979 aa12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 MAB21L3Q8N8X9 362 aa12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 IGSF22Q8N9C0 903 aa12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 ZCCHC14Q8WYQ9 949 aaKnown RBP12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 SLC22A12Q96S37 553 aa12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 TPSD1Q9BZJ3 242 aa12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 PLEKHA5Q9HAU0 1116 aa12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 LRWD1Q9UFC0 647 aa12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 KLK13Q9UKR3 277 aa12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 RBM19Q9Y4C8 960 aaKnown RBP12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 KNL1Q8NG31 2342 aa12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 ADAMTS20P59510 1910 aa12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 MAST4O15021 2626 aa12.91□□□□□ -0.34
SPTLC1P3-201ENST00000403408 NPHP3-ACAD11A0A0J9YXS1 232 aa12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 APBB3O95704 486 aa12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 CYP11A1P05108 521 aa12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 HAPLN1P10915 354 aaPredicted RBP12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 CEACAM1P13688 526 aa12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 TOB1P50616 345 aaPredicted RBP12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 NLRP12P59046 1061 aa12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 GAB4Q2WGN9 574 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms