RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 SMARCB1Q12824 385 aa17.05■□□□□ 0.32
ATG4B-203ENST00000400772 PSMD2Q13200 908 aa17.05■□□□□ 0.32
ATG4B-203ENST00000400772 PSMD6Q15008 389 aa17.05■□□□□ 0.32
ATG4B-203ENST00000400772 SOWAHAQ2M3V2 549 aa17.05■□□□□ 0.32
ATG4B-203ENST00000400772 GAREM2Q75VX8 874 aa17.05■□□□□ 0.32
ATG4B-203ENST00000400772 HS2ST1Q7LGA3 356 aa17.05■□□□□ 0.32
ATG4B-203ENST00000400772 TRAPPC11Q7Z392 1133 aa17.05■□□□□ 0.32
ATG4B-203ENST00000400772 TOP6BLQ8N6T0 577 aa17.05■□□□□ 0.32
ATG4B-203ENST00000400772 C2orf15Q8WU43 125 aaKnown RBP17.05■□□□□ 0.32
ATG4B-203ENST00000400772 ZNF516Q92618 1163 aa17.05■□□□□ 0.32
ATG4B-203ENST00000400772 PKMYT1Q99640 499 aa17.05■□□□□ 0.32
ATG4B-203ENST00000400772 SEPT5Q99719 369 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-203ENST00000400772 ACBD6Q9BR61 282 aa17.05■□□□□ 0.32
ATG4B-203ENST00000400772 TBC1D17Q9HA65 648 aa17.05■□□□□ 0.32
ATG4B-203ENST00000400772 DDX43Q9NXZ2 648 aaKnown RBP17.05■□□□□ 0.32
ATG4B-203ENST00000400772 CGNQ9P2M7 1197 aaKnown RBP17.05■□□□□ 0.32
ATG4B-203ENST00000400772 ASB3Q9Y575 518 aa17.05■□□□□ 0.32
ATG4B-203ENST00000400772 A0A1W2PRU2 124 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 TNNC2P02585 160 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 MYL1P05976 194 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 DLATP10515 647 aaKnown RBP17.04■□□□□ 0.32
ATG4B-203ENST00000400772 ACAT1P24752 427 aaKnown RBP17.04■□□□□ 0.32
ATG4B-203ENST00000400772 STARD6P59095 220 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 SNW1Q13573 536 aaKnown RBP17.04■□□□□ 0.32
ATG4B-203ENST00000400772 MGAT5BQ3V5L5 792 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 SLC44A4Q53GD3 710 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 PHLDB3Q6NSJ2 640 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 DCP1BQ8IZD4 617 aaKnown RBP17.04■□□□□ 0.32
ATG4B-203ENST00000400772 TMEM86AQ8N2M4 240 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 SPPL2BQ8TCT7 592 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 PLEKHO2Q8TD55 490 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 TMEM174Q8WUU8 243 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 SMARCD2Q92925 531 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 CCDC127Q96BQ5 260 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 HPDLQ96IR7 371 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 CGRRF1Q99675 332 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 MKNK1Q9BUB5 465 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 KCTD10Q9H3F6 313 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 ZFP14Q9HCL3 533 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 EXOC1Q9NV70 894 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 DMAC2Q9NW81 257 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 ABI2Q9NYB9 513 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-203ENST00000400772 COL4A3Q01955 1670 aa17.04■□□□□ 0.32
ATG4B-203ENST00000400772 NCANO14594 1321 aa17.03■□□□□ 0.32
ATG4B-203ENST00000400772 DMDP11532 3685 aa17.03■□□□□ 0.32
ATG4B-203ENST00000400772 H0Y858 1186 aa17.03■□□□□ 0.32
ATG4B-203ENST00000400772 STK25O00506 426 aa17.03■□□□□ 0.32
ATG4B-203ENST00000400772 RPN1P04843 607 aaKnown RBP17.03■□□□□ 0.32
ATG4B-203ENST00000400772 VIPR2P41587 438 aa17.03■□□□□ 0.32
ATG4B-203ENST00000400772 DPYDQ12882 1025 aa17.03■□□□□ 0.32
ATG4B-203ENST00000400772 MYO1EQ12965 1108 aa17.03■□□□□ 0.32
ATG4B-203ENST00000400772 CCDC142Q17RM4 750 aa17.03■□□□□ 0.32
ATG4B-203ENST00000400772 INTS6LQ5JSJ4 861 aaKnown RBP17.03■□□□□ 0.32
ATG4B-203ENST00000400772 STXBP5Q5T5C0 1151 aa17.03■□□□□ 0.32
ATG4B-203ENST00000400772 KRBA2Q6ZNG9 492 aa17.03■□□□□ 0.32
ATG4B-203ENST00000400772 ALYREFQ86V81 257 aaKnown RBP17.03■□□□□ 0.32
ATG4B-203ENST00000400772 CCDC105Q8IYK2 499 aa17.03■□□□□ 0.32
ATG4B-203ENST00000400772 FSIP1Q8NA03 581 aa17.03■□□□□ 0.32
ATG4B-203ENST00000400772 ZSCAN18Q8TBC5 510 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-203ENST00000400772 SPATA18Q8TC71 538 aa17.03■□□□□ 0.32
ATG4B-203ENST00000400772 DDX23Q9BUQ8 820 aaKnown RBP17.03■□□□□ 0.32
ATG4B-203ENST00000400772 TRPV4Q9HBA0 871 aa17.03■□□□□ 0.32
ATG4B-203ENST00000400772 IL21Q9HBE4 155 aa17.03■□□□□ 0.32
ATG4B-203ENST00000400772 PCDHB5Q9Y5E4 795 aa17.03■□□□□ 0.32
ATG4B-203ENST00000400772 MYO15AQ9UKN7 3530 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 EXOC3O60645 756 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 PRPF40AO75400 957 aaKnown RBP17.02■□□□□ 0.32
ATG4B-203ENST00000400772 TNNI1P19237 187 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 LMO2P25791 158 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 LHX1P48742 406 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 CASP4P49662 377 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 GPR15P49685 360 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 TSPY1Q01534 308 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 GRM2Q14416 872 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 BECN1Q14457 450 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 VITQ6UXI7 678 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 DPH6Q7L8W6 267 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 ITIH5Q86UX2 942 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 ADGRF2Q8IZF7 708 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 GIPC2Q8TF65 315 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 KBTBD7Q8WVZ9 684 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 RSPRY1Q96DX4 576 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 FNBP1Q96RU3 617 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 PI4K2AQ9BTU6 479 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 FOXQ1Q9C009 403 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 GPR88Q9GZN0 384 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 FAM86C1Q9NVL1 165 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 DLGAP2Q9P1A6 1054 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 GTF3C4Q9UKN8 822 aa17.02■□□□□ 0.32
ATG4B-203ENST00000400772 MYBPHLA2RUH7 354 aa17.01■□□□□ 0.31
ATG4B-203ENST00000400772 SHISA7A6NL88 538 aa17.01■□□□□ 0.31
ATG4B-203ENST00000400772 RHOBTB3O94955 611 aa17.01■□□□□ 0.31
ATG4B-203ENST00000400772 ZNF202O95125 648 aa17.01■□□□□ 0.31
ATG4B-203ENST00000400772 GLULP15104 373 aa17.01■□□□□ 0.31
ATG4B-203ENST00000400772 HMGA1P17096 107 aaKnown RBP17.01■□□□□ 0.31
ATG4B-203ENST00000400772 GABRR2P28476 465 aa17.01■□□□□ 0.31
ATG4B-203ENST00000400772 MYL7Q01449 175 aa17.01■□□□□ 0.31
ATG4B-203ENST00000400772 PFKPQ01813 784 aa17.01■□□□□ 0.31
ATG4B-203ENST00000400772 MLF2Q15773 248 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-203ENST00000400772 NFE2Q16621 373 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms