RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 CNTFP26441 200 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 RPL21P46778 160 aaKnown RBP10.42□□□□□ -0.74
PTPRM-203ENST00000400060 MAP3K10Q02779 954 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 AASDHQ4L235 1098 aaPredicted RBP10.42□□□□□ -0.74
PTPRM-203ENST00000400060 PPP6R3Q5H9R7 873 aaPredicted RBP10.42□□□□□ -0.74
PTPRM-203ENST00000400060 CCNJLQ8IV13 435 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 PPM1KQ8N3J5 372 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 UCMAQ8WVF2 138 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 KIAA1024Q9UPX6 916 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 C1orf232A0A0U1RR37 186 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 PNMA8CA0A1B0GUJ8 204 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 PIK3R2O00459 728 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 GNPATO15228 680 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 PDE8BO95263 885 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 PGM3O95394 542 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 CPA2P48052 419 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 OXCT1P55809 520 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 PRAMEP78395 509 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 GALNTL6Q49A17 601 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 LRRC49Q8IUZ0 686 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 GLYCTKQ8IVS8 523 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 SNX31Q8N9S9 440 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 ST13P5Q8NFI4 369 aaPredicted RBP10.42□□□□□ -0.74
PTPRM-203ENST00000400060 GLG1Q92896 1179 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 STRBPQ96SI9 672 aaKnown RBP10.42□□□□□ -0.74
PTPRM-203ENST00000400060 DCLK3Q9C098 648 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 MAGEE1Q9HCI5 957 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 TLK1Q9UKI8 766 aa10.42□□□□□ -0.74
PTPRM-203ENST00000400060 SLIT1O75093 1534 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 GRK2P25098 689 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 ARSEP51690 589 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 CENPPQ6IPU0 288 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 PRR23BQ6ZRT6 265 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 FAM228AQ86W67 206 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 EXOC8Q8IYI6 725 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 ULK2Q8IYT8 1036 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 DEPTORQ8TB45 409 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 C18orf8Q96DM3 657 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 AKAP10O43572 662 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 HOXD12P35452 270 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 ARHGDIAP52565 204 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 SCARA3Q6AZY7 606 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 NT5DC3Q86UY8 548 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 SLC10A4Q96EP9 437 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 DDX50Q9BQ39 737 aaKnown RBP10.41□□□□□ -0.74
PTPRM-203ENST00000400060 EPB41L1Q9H4G0 881 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 KBTBD4Q9NVX7 518 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 NCANO14594 1321 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 NOTOA8MTQ0 251 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 GOLGA8MH3BSY2 632 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 DNALI1O14645 258 aaPredicted RBP10.41□□□□□ -0.74
PTPRM-203ENST00000400060 KIAA0391O15091 583 aaKnown RBP10.41□□□□□ -0.74
PTPRM-203ENST00000400060 CHMP2AO43633 222 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 GAS2O43903 313 aaKnown RBP10.41□□□□□ -0.74
PTPRM-203ENST00000400060 SHBGP04278 402 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 FDFT1P37268 417 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 IL12RB1P42701 662 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 SLC18A1P54219 525 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 GRM1Q13255 1194 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 MKRN4PQ13434 485 aaPredicted RBP10.41□□□□□ -0.74
PTPRM-203ENST00000400060 TOP3AQ13472 1001 aaPredicted RBP10.41□□□□□ -0.74
PTPRM-203ENST00000400060 PICALMQ13492 652 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 SYDE2Q5VT97 1194 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 EGFLAMQ63HQ2 1017 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 TTBK2Q6IQ55 1244 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 TTC30AQ86WT1 665 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 APOPT1Q96IL0 206 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 C9orf72Q96LT7 481 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 ACCSQ96QU6 501 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 APOL6Q9BWW8 343 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 EFCAB1Q9HAE3 211 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 PRDM16Q9HAZ2 1276 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 NINJ2Q9NZG7 142 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 SEL1LQ9UBV2 794 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 PRPF19Q9UMS4 504 aaKnown RBP10.41□□□□□ -0.74
PTPRM-203ENST00000400060 CCDC195A0A1B0GUA6 201 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 GTPBP10A4D1E9 387 aaKnown RBP10.41□□□□□ -0.74
PTPRM-203ENST00000400060 HTR3EA5X5Y0 456 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 F8W031 263 aaPredicted RBP10.41□□□□□ -0.74
PTPRM-203ENST00000400060 H7C0C1 242 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 PHGDHO43175 533 aaKnown RBP10.41□□□□□ -0.74
PTPRM-203ENST00000400060 FCER1AP12319 257 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 CCNA2P20248 432 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 BMP6P22004 513 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 ATP5OP48047 213 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 STX5Q13190 355 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 MDH1BQ5I0G3 518 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 LRRC8EQ6NSJ5 796 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 TMEM126BQ8IUX1 230 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 ARID3BQ8IVW6 561 aaPredicted RBP10.41□□□□□ -0.74
PTPRM-203ENST00000400060 PPIL6Q8IXY8 311 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 CYGBQ8WWM9 190 aa10.41□□□□□ -0.74
PTPRM-203ENST00000400060 GPKOWQ92917 476 aaPredicted RBP eCLIP10.41□□□□□ -0.74
PTPRM-203ENST00000400060 PSTPIP1O43586 416 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 ZBED1O96006 694 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 NFKBIAP25963 317 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 EAPPQ56P03 285 aaPredicted RBP10.4□□□□□ -0.74
PTPRM-203ENST00000400060 SH3D19Q5HYK7 790 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 RAB44Q7Z6P3 723 aaPredicted RBP10.4□□□□□ -0.74
PTPRM-203ENST00000400060 ZNF354CQ86Y25 554 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms