RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 XKR3Q5GH77 459 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 FRMD5Q7Z6J6 570 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 CIPCQ9C0C6 399 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 WDCPQ9H6R7 721 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 GEMIN8Q9NWZ8 242 aaKnown RBP14.35□□□□□ -0.11
VAPA-202ENST00000400000 ALDH1A2O94788 518 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 CLCN3P51790 818 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 ATP2C1P98194 919 aaPredicted RBP14.35□□□□□ -0.11
VAPA-202ENST00000400000 METTL16Q86W50 562 aaKnown RBP14.35□□□□□ -0.11
VAPA-202ENST00000400000 ARHGEF26Q96DR7 871 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 CEP41Q9BYV8 373 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 DPP3Q9NY33 737 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 WWOXQ9NZC7 414 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 CDYLQ9Y232 598 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 B3GAT3O94766 335 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 RALBP11234 206 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 CHI3L1P36222 383 aaPredicted RBP14.35□□□□□ -0.11
VAPA-202ENST00000400000 MRPS15P82914 257 aaKnown RBP14.35□□□□□ -0.11
VAPA-202ENST00000400000 SNX17Q15036 470 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 PGLYRP2Q96PD5 576 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 DMAP1Q9NPF5 467 aaPredicted RBP14.35□□□□□ -0.11
VAPA-202ENST00000400000 SCUBE2Q9NQ36 999 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 EHD2Q9NZN4 543 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 ZNF200P98182 395 aaPredicted RBP14.35□□□□□ -0.11
VAPA-202ENST00000400000 TRIM72Q6ZMU5 477 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 CNBD2Q96M20 576 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 RPRD1AQ96P16 312 aaPredicted RBP14.35□□□□□ -0.11
VAPA-202ENST00000400000 ADGRG1Q9Y653 693 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 CPSF4O95639 269 aaKnown RBP14.34□□□□□ -0.11
VAPA-202ENST00000400000 EPHB2P29323 1055 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 SGSM1Q2NKQ1 1148 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 SPATA16Q9BXB7 569 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 STK36Q9NRP7 1315 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 POMCP01189 267 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 ACO1P21399 889 aaKnown RBP14.34□□□□□ -0.11
VAPA-202ENST00000400000 OVGP1Q12889 678 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 PHACTR4Q8IZ21 702 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 ZNF579Q8NAF0 562 aaKnown RBP14.34□□□□□ -0.11
VAPA-202ENST00000400000 ATL2Q8NHH9 583 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 FBXO2Q9UK22 296 aaPredicted RBP14.34□□□□□ -0.11
VAPA-202ENST00000400000 KDM1AO60341 852 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 PCDH8O95206 1070 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 ADRA2BP18089 450 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 RPS7P62081 194 aaKnown RBP14.34□□□□□ -0.11
VAPA-202ENST00000400000 CHI3L2Q15782 390 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 CLEC16AQ2KHT3 1053 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 BNIPLQ7Z465 357 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 OOSP2Q86WS3 158 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 TMEM169Q96HH4 297 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 MRPL1Q9BYD6 325 aaKnown RBP14.34□□□□□ -0.11
VAPA-202ENST00000400000 HEATR9A2RTY3 570 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 TRPC1P48995 793 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 RARS2Q5T160 578 aaKnown RBP14.34□□□□□ -0.11
VAPA-202ENST00000400000 MAP1SQ66K74 1059 aaPredicted RBP14.34□□□□□ -0.11
VAPA-202ENST00000400000 EXOC4Q96A65 974 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 CENPTQ96BT3 561 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 ATP6V1G3Q96LB4 118 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 TBC1D4O60343 1298 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 CST8O60676 142 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 GPD1P21695 349 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 COMTP21964 271 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 SH3BGRP55822 239 aaPredicted RBP14.34□□□□□ -0.11
VAPA-202ENST00000400000 POU4F1Q01851 419 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 PRPF39Q86UA1 669 aaKnown RBP14.34□□□□□ -0.11
VAPA-202ENST00000400000 ZNF669Q96BR6 464 aaPredicted RBP14.34□□□□□ -0.11
VAPA-202ENST00000400000 MTMR12Q9C0I1 747 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 DDIT4Q9NX09 232 aa14.34□□□□□ -0.11
VAPA-202ENST00000400000 FNTAP49354 379 aa14.33□□□□□ -0.11
VAPA-202ENST00000400000 SPACA7Q96KW9 195 aa14.33□□□□□ -0.11
VAPA-202ENST00000400000 USP20Q9Y2K6 914 aa14.33□□□□□ -0.11
VAPA-202ENST00000400000 KDM6BO15054 1643 aa14.33□□□□□ -0.11
VAPA-202ENST00000400000 MYO1CO00159 1063 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 RASSF9O75901 435 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 FAM200BP0CF97 657 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 ACADMP11310 421 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 SERPINB5P36952 375 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 SPATA4Q8NEY3 305 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 AKT1S1Q96B36 256 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 IL17RAQ96F46 866 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 MED8Q96G25 268 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 MOV10L1Q9BXT6 1211 aaKnown RBP14.33□□□□□ -0.12
VAPA-202ENST00000400000 CATSPERBQ9H7T0 1116 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 SRP72O76094 671 aaKnown RBP14.33□□□□□ -0.12
VAPA-202ENST00000400000 ABCB1P08183 1280 aaPredicted RBP14.33□□□□□ -0.12
VAPA-202ENST00000400000 EFEMP1Q12805 493 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 PARP9Q8IXQ6 854 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 DDI1Q8WTU0 396 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.33□□□□□ -0.12
VAPA-202ENST00000400000 AP1G2O75843 785 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 TRIM16O95361 564 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 CKMP06732 381 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 UBTFL6P0CB48 400 aaPredicted RBP14.33□□□□□ -0.12
VAPA-202ENST00000400000 PDHBP11177 359 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 RANBP1P43487 201 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 ZNF177Q13360 481 aaPredicted RBP14.33□□□□□ -0.12
VAPA-202ENST00000400000 USP49Q70CQ1 688 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 NEDD1Q8NHV4 660 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 FBXL21Q9UKT6 434 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 SNX8Q9Y5X2 465 aa14.33□□□□□ -0.12
VAPA-202ENST00000400000 NBNO60934 754 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 218.9 ms