RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 NRG3P56975 720 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 TRIM71Q2Q1W2 868 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 ATF7IP2Q5U623 682 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 C12orf50Q8NA57 414 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 LINC00301Q8NCQ3 95 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 SAYSD1Q9NPB0 183 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 FTCDO95954 541 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 IFNAR1P17181 557 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 CHRM3P20309 590 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 ITGA3P26006 1051 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 EPHB4P54760 987 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 ACTN3Q08043 901 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 NR5A1Q13285 461 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 NAA30Q147X3 362 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 SLC35F6Q8N357 371 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 RNF25Q96BH1 459 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 EIF2AK1Q9BQI3 630 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 MYO1GB0I1T2 1018 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 KIF23Q02241 960 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 TRIM25Q14258 630 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 GSTA3Q16772 222 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 RABGAP1LQ5R372 815 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 NRSN1Q8IZ57 195 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 TTC17Q96AE7 1141 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 C1QTNF7Q9BXJ2 289 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 ZSWIM5Q9P217 1185 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 MAPK13O15264 365 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 NFICP08651 508 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 GPC1P35052 558 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 CASP8Q14790 479 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 ZNF658Q5TYW1 1059 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 KRT39Q6A163 491 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 CRLF3Q8IUI8 442 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 RNPC3Q96LT9 517 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 SH3GL1Q99961 368 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 SH3GL3Q99963 347 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 HDAC6Q9UBN7 1215 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 SNAP23O00161 211 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 CHUKO15111 745 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 KPNA6O60684 536 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 CTNND1O60716 968 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 ARL3P36405 182 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 CCL23P55773 120 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 RWDD2BP57060 319 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 RPL10AP62906 217 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 SP3Q02447 781 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 FAPQ12884 760 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 MDH1BQ5I0G3 518 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 LUZP2Q86TE4 346 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 PALB2Q86YC2 1186 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 MARCH10Q8NA82 808 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 SH2D3AQ9BRG2 576 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 MKNK1Q9BUB5 465 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 LNPEPQ9UIQ6 1025 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 VPS28Q9UK41 221 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 ABCA9Q8IUA7 1624 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 POTEFA5A3E0 1075 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 C3orf70A6NLC5 250 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 PRPF3O43395 683 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 POTEIP0CG38 1075 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 TCF7P36402 384 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 MAP3K10Q02779 954 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 MORF4L2Q15014 288 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 POTEGQ6S5H5 508 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 POTEEQ6S8J3 1075 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 ZC3H18Q86VM9 953 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 FBXO16Q8IX29 292 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 IP6K2Q9UHH9 426 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 CASTOR2A6NHX0 329 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 POTECB2RU33 542 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 COPEO14579 308 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 NCAM2O15394 837 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 PEX1O43933 1283 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 KRT4P19013 534 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 ACOT2P49753 483 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 AP3M2P53677 418 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 RPS6P62753 249 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 CCZ1BP86790 482 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 CCZ1P86791 482 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 TAF5Q15542 800 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 EMBQ6PCB8 327 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 GRAMD1CQ8IYS0 662 aa11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 RPRD1AQ96P16 312 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 MRPS26Q9BYN8 205 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-216ENST00000399638 CYTH3O43739 400 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 SCGNO76038 276 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 FAM200BP0CF97 657 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 ARL4CP56559 192 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 ACOX1Q15067 660 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 SHROOM1Q2M3G4 852 aaPredicted RBP11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 GOLGA7BQ2TAP0 167 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 PRR5LQ6MZQ0 368 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 ZNF589Q86UQ0 364 aaPredicted RBP11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 SOCS4Q8WXH5 440 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 EML4Q9HC35 981 aaKnown RBP11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 BFARQ9NZS9 450 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 TTC7AQ9ULT0 858 aaPredicted RBP11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 H0Y3Z8 333 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 AKR1B1P15121 316 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 FIBCD1Q8N539 461 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms